Rhizoctonia solani: RhiXN_06223
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Entry
RhiXN_06223 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
Chromo
Retrotrans_gag
RVP_2
rve
Ty3_capsid
gag-asp_proteas
Asp_protease_2
zf-H2C2
DUF809
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
67028502
NCBI-ProteinID:
XP_043181471
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Position
7:join(168845..169585,169639..171321,171361..173019)
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AA seq
1360 aa
AA seq
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MDLPDPYKGDTRGRKATQWLDRMMLWVALHRDQFNKEEQMVVWILYHMTDKAADWALPII
GAIIKGEGNPPTTIQALTGKFKEAFADPDAKRAAARKIAALSQTTTTSKYVTEFRNLMAE
LDWNKEAYIAQFTRGLHWKVKELLSTKDSVPDELKAIFAASIKIDNIRRKNKENRPKKAP
AKSPATVATTSTTTTQRVRLSEDPNYVTPEERDRRRASGLCVKCGQKGHDIKQCPNGWKA
TIKEVAKPPTKKDNIDIEFVNLGLDSNKKPLLFIDLYVQNSPAEPLKTLIDSGATSNFIS
PLIVEKHKIPKTLLENPRVVRMLDGTISQTGRIWHQVILTVSANGHIHSIPFLVCPIGNT
PAILGMTWLTSKSPLIDWQQGTVTFPKQVAIASEEEADPNPLANLPPQYHEFARVFGEEE
FKVLPPHREYDIAIDLIPDAKLSPGPIYGMTDAESKALKQHIDEELATGKIRPSTSSAGA
PVMFVKKADGSLRLVVDYRKLNDVTHKNVYPLPRQDDLMAKLRHAKMFTKLDLRWGYNNV
RIKEGDEWKTAFRTKYGLFEYLVMPFGLTNAPAAFQHFMNDLFRDLIDVTVVIYLDNILI
FLEKPEEHPAHVREVLSRLMANQLFCKLSKCHFHVTTVDYLGIVISPAGFSMDQKKIEAV
TTWPTPKTVKQVQAFLGFVNYLRWFIPNFSSVARPLHNLTKKETPWSWGNPEEEAFQELK
RLVTWSPVLIHSNPSLPYYLETDASGVAMGAILSQRGEDNRLHPVAYMSKSFSGAEANYD
THDKELLAIIKALEEWRIFLEATDKPIQARTFNRRHARWRIFLSDFNFEIHYRPGKQSGK
PDALSRRADYVDNPSEPEVMLPAEVFANTSEEELEIVTEIRTKLREDPSLEPIIQFLTED
ADNAPPSIRKAYKDYDWEEDLLWYRGKLVVPDSEALKERLLKEFHDSPLAGHPGQQRTLE
LLSRNYWWPGMKSSAKEWVECCPTCQTNRQAHAPVIALKPLEVPPFPFHTISYDFITGFP
KSQGHNAILVVIDSFSKFGHFIPTSKKVTAKGLADLFITHVWKLHGLPVKTISDRGTTFT
GKFLRALYQRLGVKPAFSSAYHPESDGQTERVNQFIKFYLRSYVAADHSDWATWLPLAEY
AYNNARHASTGKTPFELVYGKNPVMNPSNIPSNVPEADQLADTLANEWKEAESALKMSKE
KMTRDKGTIPKYSIGELVWLDGKNVELRTNSNKLDPKRLGPFEVLEKISSHAYRLKLLET
LKIHDVFYVGLLSKVHKSPSQPFPERPPPETIEGEEEYEVEQIIDSKRQRGKWFYLIKWK
GYGPEDNSWEPEELLEHSQEEIQRFNKSRLKKACDSAKSL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggacctccccgacccatataagggagacaccaggggccgcaaagccacccagtggcta
gacagaatgatgctctgggtagccctccaccgggaccaattcaacaaggaggagcagatg
gttgtgtggatcctctaccacatgaccgataaggccgcagactgggcgcttcccatcatt
ggggcaatcatcaagggagaagggaaccctccgaccaccatccaggccctaacgggcaaa
ttcaaagaagcatttgccgatccagatgccaagagggccgccgccaggaaaattgcggca
ctctcccaaaccaccacaacctccaagtacgtcacggagttccgcaatctcatggcggaa
ttagactggaacaaggaagcctacatcgcgcagttcacgcgaggactccactggaaggtg
aaggaactgctatcaacaaaagatagcgttcctgacgaactcaaagcaatttttgcggct
tccataaaaattgacaacatacgccgcaaaaacaaggagaaccgcccaaaaaaggcaccc
gccaagtccccggccaccgtggccactacctccaccactaccacccaacgggtccgcctc
tcagaggaccccaattacgtcaccccagaagaaagggaccgccgccgcgcatctgggcta
tgcgtgaaatgcggacaaaagggccacgacatcaagcagtgtccaaatgggtggaaggcc
acaatcaaggaggtggctaagcccccgactaaaaaggacaatatagatattgaatttgta
aatctaggactggattcaaataaaaaaccactgctatttatcgatctctatgtccagaat
tccccggcagaacccttgaaaacattgatagactcaggagccacgtcaaacttcatctcc
cccttgatagtggaaaaacacaaaatccccaaaaccctactcgaaaatccacgagtagtg
agaatgttagatggtactatttcacaaactgggcgcatttggcaccaggtaatcctcacg
gtttcggccaatggccacatccattccattcctttcctagtttgcccaataggcaatacc
ccagcaatacttggcatgacctggctcacaagcaaatccccactcatcgattggcagcaa
ggaacagttacgttccccaaacaagtagcaattgcctccgaggaagaagcagaccccaac
cctctggcaaaccttccaccccaatatcacgaatttgcccgagtctttggagaagaggaa
ttcaaggtcttacccccacacagggagtatgatattgcaatagaccttatcccagatgcc
aaactctcccccggccctatctatggcatgacagacgcggaatcaaaggcgctaaaacaa
cacatagacgaagaattggcaacaggaaagatccgtcctagcacttcttctgctggcgcc
cccgttatgttcgttaaaaaggcggatggatcccttagattggtggttgattacaggaag
ttaaatgatgtcacgcacaaaaacgtctacccgctccccagacaagatgacctcatggcc
aaactaaggcacgccaagatgttcaccaaactggacctaagatggggttataacaatgtc
cggattaaggaaggagacgaatggaagacggcttttagaacaaagtatgggttatttgaa
tacctggtgatgccctttgggcttaccaatgccccagccgccttccaacacttcatgaat
gacttgtttagggatcttattgacgtcaccgtggtcatctatttggacaacatcttgatc
ttcttggaaaaaccagaagaacatccagcccatgtgagggaagtactatccaggctaatg
gcaaaccaactcttctgcaaactctcaaagtgccatttccatgtgactacggttgattac
ttaggcattgtcatctcccctgctgggttctcaatggaccagaagaaaatagaagcagtc
acaacctggcccactcccaaaacggtcaaacaggttcaggctttcctaggatttgtcaac
tatcttagatggttcattcccaatttcagctcggttgcacgccccctccacaacctcacc
aaaaaggaaaccccctggtcatggggtaacccagaagaggaagcattccaggagttgaaa
cgcctagttacttggtcaccagtgcttatccattccaaccctagcctcccctactacctt
gaaacagatgcgtcaggagtagccatgggagcaatccttagtcaaagaggggaggataac
cgtttacacccagtagcctatatgtcgaaatccttctctggtgctgaggccaattacgac
acccatgacaaggaactcctagccatcatcaaagccctagaggagtggcgtattttctta
gaagcaacggacaaacccatacaggctagaacctttaatcgcaggcatgcccgatggcgc
atattcttgagcgactttaactttgagatccactaccgaccagggaaacagtcgggtaag
ccagatgcattgtccagacgagcagactatgtcgacaacccctcagaaccagaagtcatg
ctccccgcagaagtctttgccaacacgtcagaggaagaactggaaattgtcacggaaatc
cgcactaagcttagggaagacccatcccttgagcccattatccaattcctcacagaagac
gcggacaacgcccctccttccattcgtaaggcatacaaagattatgactgggaagaggac
ctcctctggtatcgtggtaaactagttgtcccagactcagaagccctaaaagaacgtcta
ctcaaggagttccacgactcacccctggcagggcaccctggacaacaaagaaccctggaa
ctcctgagccgtaattactggtggccaggaatgaagtcatccgccaaggaatgggttgaa
tgttgccccacctgtcaaacgaatcgccaagctcacgcccctgtcattgccctgaagccc
ctagaagttcctcccttcccgttccatacaatatcctacgattttattacgggatttcct
aagtcacagggccacaatgctatcctagtggtaattgactcattctccaagtttgggcat
ttcatccccacttctaagaaggttaccgccaaaggacttgcagacctattcatcacccat
gtttggaaacttcacggattaccggtcaaaacaatctccgaccgcggaactaccttcacc
gggaaattcttaagggccctctaccaacggcttggagtcaaaccagcgttctcctctgcg
taccaccctgaatcagacggacaaacggaacgggtaaaccagttcatcaaattctacctc
cgttcttacgtagccgcggatcattcagactgggccacgtggttacctttggcagaatat
gcgtacaacaacgccagacacgcgtccacaggaaaaacaccctttgaattggtctatgga
aaaaatccggtgatgaacccctccaacataccgtccaacgtaccagaagcagaccaatta
gcagacaccttggccaatgaatggaaggaagcagagtccgccctcaagatgagcaaggaa
aaaatgactagggataaaggaaccatccccaaatattcaatcggtgaattggtctggcta
gatggaaagaacgtggaactcaggaccaactccaataaactggatcctaaaagactaggt
cctttcgaagttttagagaagatttccagtcatgcataccgcctgaagctgctggaaact
ttgaaaatccacgatgtgttctacgtgggactattgtccaaagtccataagtcccctagc
caaccgtttccagaacgaccccctccagaaacaatcgagggggaagaagaatatgaagtg
gaacaaatcattgactcaaaaaggcaacgagggaaatggttctatttgatcaagtggaaa
ggatacggtccggaggacaattcttgggaaccagaagaactcctggagcacagccaggag
gaaattcaacgttttaacaagtcacgactgaaaaaggcttgtgactctgccaagagcctt
taa
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