Rhizoctonia solani: RhiXN_08166
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Entry
RhiXN_08166 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
Chromo
Retrotrans_gag
rve
Ty3_capsid
RVP_2
Asp_protease_2
gag-asp_proteas
zf-H2C2
Asp_protease
Motif
Other DBs
NCBI-GeneID:
67030445
NCBI-ProteinID:
XP_043183367
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Position
9:join(2120382..2121730,2121808..2125168)
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AA seq
1569 aa
AA seq
DB search
MATRSRTASRAQYPFDSGHLEPQLPPTSSVEYGEVSLEQVTRLLLGLLGQVERLEREIAE
IKEAGIKTRTNVENISQTIDVVKDGLKSLQLQGPRTPEGNQPKAVEETPRPIPKTKPIGS
VSRVPFWSEPTREAPGLAQPTPRRAAPPRVPSPPPSPRLRSPIGAPAPPPPASVAAYPAP
VKVDHPDAYTGKIGSKAKQWLTRMLAWTRLNSRMFPTDQEVLSFLLMNMKDSAGAWAHPH
LDQLGSHRAIIQTVEGFKIEFLAAFGDPDATRAAERKITTLTQSGTCADYITKFRTLAME
LDWNDAALRGQFARGLHWEVSRQIATRKHRPRTLLELQNAALVIDNALREERASHPPRDN
KPSKQPNPARGTSTGQSSTGSKKLSDDPNFVSEEERNRRRAAGACIKCGKMGHKFAECRT
GWKATPTEDKGKAKETAKIGKDSEYQSGKDHNRISPLFTIFIKPEKQADHLEVLIDSGAT
SSFLHPRTAELLRLPLIELPQPRTVTMLDGSSPQAGKIWKKAHLTFLFDGKRMTETFLIC
NTGSHAAILGIKWLENHNPKIDWNSRTLSFPHTPPEHIAIAEEEEADKTPLEGVPPKYHQ
YAKVFGEEEFNKLPPHRHYDIGIELTEEGPLNSPLYSMTDAKSATLKDWLRDELKAGKIR
PSKLPISSPVMFVPKKDGSRRLVVDYRRLNNRTKKNVYPLPRPDDLMAQLCSAKVFTKLD
LRWGYNNVRVKEGDEWKTAFRTKYGLYESLVMTFGLTNAPAAFQHFMNELFKDLLDVCVI
IYLDDILIYSKDDATHTQHVHEVLRRLMENQLFCKASKCTFHVTSVEYLGIIVLDKGFSL
DKLKIQAVREWPTPTKVKEVQSFLGFANFLRRFVANFSHIARPLHNLVKKDTPWKWETRE
QEAFQNLKDAITSAPVLCHADPAKPYFLETDASGAALGSILSQRQEDGRLHPLGFLSESF
KGAEQNYNTHDKELLAIIRSFEYWRIFLEGTAHPITVFTDHRNLEYWKESRTFNRRHARW
HLLLAGYNFQIVYRPGKQSGKPDALSRRADHADIPPADQTMLPDPVFANVALVLPEKELQ
RRIKSSLDQDESLEEILQFLQNESKAPPSIKRAFKDYEMEAGLLFYQGRIVVPDVGTLRT
DLLKIFHDSPLAGHPGRQRTLELVSRTYYWPGIRADTYWHVDSCETCQRIRKPKYALIPP
QPLELPSRPWQHVSYDMIVDLPKDGNCDSILVIVDSFTKYVILVECSKKLKAPELADLFL
RHVWKRYGMPEKTISDRGRVFNNKFLKALYQRLGIDPHFSLAYHPQSDGQTERVNPTVEH
FLRAYSGVNQKDWVKWLPMAEFAYNNAVHSSTGKSPFKALYGWEPSLTPSNVPTDVPEAD
NLATQMEEQWREIEAALRQSKTRMVAGEAGEPLEFEIGEEAWLDAKNVKLKTLSPKLTEQ
RLGPFKVTEKISDRAYHLELPPTMRIHNVFYVGLLSKVKRDKKRTFENCPPPVTVDGEEE
YEVEGITDMEERNGKWFFRVKWKGYGPEENTWEPRENLKNAGKILKKYEEEMRKKALGAA
KALRGGAVS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgttcccggacggcctctcgagcccaatacccttttgattcgggacacctg
gaaccccagcttccgccaacctcctctgtcgaatatggcgaagtctccctcgaacaagtc
acccgactcctcctcggcctactcggccaagttgagcgcctcgagcgagaaatcgctgag
atcaaggaagcagggatcaagacccggacaaacgtcgaaaatatctcacaaaccatcgat
gttgtcaaggatggtctcaagtccctccagctccaaggcccccgtaccccagaagggaac
caacccaaggcagtggaagaaacgccacgccccataccaaaaaccaagcctattggatcg
gttagcagggtacccttctggtcagaaccaactagggaagccccaggccttgcccagcct
accccaagaagagccgcacccccgcgagtcccgtctccccctccatctccgcgtctccga
tcccccatcggagcacctgcccctcctccaccggcttcagttgccgcatatcctgccccg
gtcaaagtagaccacccagatgcctatacaggcaagattgggagcaaggccaaacagtgg
ctcacaaggatgttggcctggacccggctaaactcgcgcatgtttcccacggaccaagaa
gtcctatccttccttctgatgaatatgaaggattccgcgggagcatgggcacacccacac
cttgaccagcttggatcacaccgggcaatcatccaaacggttgagggattcaaaatagag
tttttggcagcatttggcgaccctgatgccacaagggccgccgagcggaagattaccacg
cttacccagtccggcacatgcgcggattatatcacaaagttcagaaccctggcaatggaa
ctggactggaacgacgcggcccttcgaggccagtttgcccgcggcctccactgggaggtc
agccgccaaatcgctacccgcaaacatcgcccccgaacactccttgagctgcaaaacgca
gcacttgttattgacaacgccctccgggaagagcgtgctagccacccgccgagggataat
aagcctagcaaacaacccaaccccgcaaggggaacgagtaccggccaatcaagtaccggt
tcgaagaaactctccgacgaccccaatttcgtgtcggaggaggaaaggaatcgccgccgc
gccgctggcgcctgcatcaagtgcggcaaaatgggccacaagttcgcggaatgccgcaca
ggctggaaggctacccctactgaggacaaagggaaagccaaggaaaccgccaagattggc
aaagactccgagtaccaatcgggaaaagaccacaatagaatctcccccctcttcactatt
ttcatcaaaccagagaaacaagcggatcacttagaagtcctgatagactcaggcgccacc
tcatccttcttacacccccgtacagcggaactactccgccttcctctaatagagctccca
caaccccgtactgttactatgctcgatgggtcgagcccccaggctggaaagatttggaag
aaggcccacctaaccttcctatttgatggcaaacgcatgacggaaaccttcctgatttgc
aataccggatcacacgctgccatcctaggaattaaatggttagagaatcataatcccaaa
atcgattggaactcgcgcaccctctcattccctcacacgcccccggaacacatagccatt
gcggaagaggaggaagctgacaagacaccccttgaaggagtaccccccaagtaccatcaa
tatgcaaaggtatttggggaagaagaattcaataaacttccccctcatagacactacgat
attggtatcgaacttacggaagaaggacccctgaactcccccctttacagcatgactgat
gccaaatccgccacactcaaggactggctcagggacgagctcaaggctggaaaaatccga
cccagtaaattgccaatcagctccccagttatgttcgtgcccaaaaaggatggttcccgt
cgacttgtagtagactatcgtcgcctgaacaaccggacaaagaagaacgtttacccgcta
ccccgtccagatgacctcatggcccagctttgcagtgccaaggtcttcaccaagctagac
ctaagatggggttacaataacgtccgtgttaaagaaggtgacgaatggaaaacggctttc
cgcaccaaatatggcctatacgaatccctggttatgacctttggcttgactaatgctcct
gcggccttccaacatttcatgaacgaactgttcaaagatttattggatgtatgcgtcatc
atctaccttgatgatatcctaatctactcaaaggatgacgcaacccatacccagcacgtc
catgaagtcctacgacgcttaatggagaaccaattgttctgtaaggcatccaagtgtaca
ttccacgtcacatcagtggagtatttaggaataattgtattggataagggattcagcctg
gataagctcaaaatccaggcagtccgagaatggcccacgcccaccaaagtcaaggaagta
caatcgttcctaggctttgccaatttcctgcgccgttttgttgccaattttagtcacata
gcccggccactgcacaacctggtaaagaaagatacgccatggaaatgggaaactagggaa
caggaagccttccaaaacttgaaggatgccatcactagtgccccggtactctgccacgcc
gaccctgccaaaccatacttcctcgagacggatgcctctggcgcagcactgggctccata
ctaagccaacgccaagaggatggtcgcctacatcccctaggtttcttgtcagaatcattc
aaaggtgccgaacagaactacaacacccacgacaaggaactccttgcgatcatccgctcc
tttgaatattggcgaatcttcctggaaggaacggcccaccccataacggtattcaccgat
cacaggaacttagagtactggaaagaatcccgaaccttcaaccgtcgtcatgcaaggtgg
cacctcttactagctggctacaatttccaaatagtctatcgccctggcaagcagtccggc
aaaccagatgccctgtcccgccgcgccgaccacgccgatattccgcctgccgaccaaaca
atgctgcccgaccccgtctttgccaacgtggcactagttctaccagaaaaagagctacaa
aggcgtatcaagtcaagcctggaccaggacgagtccctggaagagattctccaattctta
caaaacgagtccaaggcaccaccctccatcaaacgcgcgttcaaggattatgaaatggag
gctggactgttgttttatcagggacggattgtggtaccggacgtaggaaccttgaggacg
gatctgctcaaaatcttccacgatagtccgttggcgggccatccaggcagacaaaggact
ctagaactagtatccagaacttactactggcccggcatccgtgcagatacatactggcac
gttgactcatgtgaaacctgccaacggattcggaaacccaagtacgcattgatcccgcct
cagcctttagaactcccatcacgcccgtggcaacatgtgtcatacgacatgatagtagac
ctacccaaagacggaaactgcgattctatcctggtcattgtggatagttttactaagtac
gtgatcctagtagagtgctccaagaagctcaaggccccggagttagcagacctattccta
cgccatgtgtggaagcgttacggcatgcctgagaagacaatatcagaccgcggacgggtt
tttaataacaaattcctgaaggcgctgtaccaacgcctgggaatagacccccacttctct
ttggcctaccatcctcaaagcgacgggcaaacggaacgcgtgaaccccacggtggaacac
tttttacgggcgtactcaggggtaaaccagaaagactgggtcaagtggctaccaatggcg
gaatttgcctacaacaacgcagtacacagctcaacaggcaaatctcccttcaaggcactt
tacggctgggaaccttccttgactccaagtaacgtcccaacggatgtccccgaggcagat
aatctggcaacccaaatggaagaacaatggcgggaaatagaggcggcactccggcaatca
aagacacgcatggtagccggagaagcaggtgaaccacttgaattcgaaatcggggaagaa
gcctggctggacgccaagaatgtgaagctaaagacccttagtccaaagctaactgaacaa
cgcctaggccccttcaaggtaaccgagaaaatctccgacagggcttaccacttggaactt
cccccaaccatgcggatccataacgttttctatgtgggactcttatctaaagtcaagagg
gacaaaaagcgcacctttgaaaattgtccccctccagtcaccgtggacggggaagaggaa
tacgaagtggaagggataacggacatggaagagaggaacggaaaatggttcttcagagtc
aaatggaagggctacggaccagaagagaacacgtgggagccccgagagaacctcaaaaat
gcggggaaaattttgaaaaaatacgaagaagaaatgagaaagaaggccctcggcgctgcc
aaggcccttagagggggggcagtgtcgtag
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