Rhizoctonia solani: RhiXN_08266
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Entry
RhiXN_08266 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RVT_1
RT_RNaseH_2
Integrase_H2C2
Chromo
Retrotrans_gag
RVP_2
gag-asp_proteas
rve
Ty3_capsid
zf-H2C2
Asp_protease_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
67030545
NCBI-ProteinID:
XP_043183467
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Position
10:join(236595..237768,237834..241192)
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AA seq
1510 aa
AA seq
DB search
MEPEPSLTTLLEAITALTATIGSLQDQIKSQGKQITQLAAICKETNDLVGDKDQGGAQAK
PGPLTGPVTPPTHSGGETHTPGTVRPGLKAPFRPSRGTGFDSEEEEEPRRAPKKEPMGTP
KRSLSSLTPFDSGSSVKQPKMELPDPYKGDTRGRKATQWLNQMLLWVALHRDLFKEEEQM
VVWILYHMTDKAADWALPLIGTIIKGEGNPPTTIPALTAKFKEAFANPDAKRAAARKIAT
LVQTSTTSEYVTEFCNLIAELDWNKEAYIAQFMQGLHWKVKELLSTKDSIPDKLEAIFVA
AIKINNIRRKNEENRPKKAPAKSPATVATNSTTSTQQVHLLEDPNYVTPEERDRRRASGL
CVKCGQKGHGIKQCPNGWKATIKEEAKVAEEDSFEFVSLALDSNKKPLLFTDLHVQNFPA
EPLKTLIDSGATLNFISPLIVEKYKIPKTQLKNPQVVRMLDGTISQTGRIWHQVHLTVLA
NGHPHSIPFLVCPIGNTPAILGMTWLTTEAPLIDWQQGLVTFPEQAQIASEEEADLDPLA
DLPPQYHEFAKVFGKEEFKVLPPHREYNISIDLVPDAKLSPGPLYGMTNAESKALKQHIN
KELATGKIRPSTSSTGAPVMFVKKADGSLRLVVDYQKLNDVTHKNVYPLPRQDDLMAKLR
HAKIFTKLNLCWGYNNVRIKEGDKWKTAFRTKYRLFEYLVMPFGLTNAPATFQHFMNDLF
RDLINVTVVIYLDNILIFSEDPKDHPTHVREVLSRLMKNQLFCKLSKCHFHVTTVDYLGI
VISPAGFSMDQKKIEAVTSWPTPKTVKQVQAFLGFVNYLRQFIPNFSSVACPLHNLTRKE
TPWSWGNLEEAAFQELKILVTKLPVLIHSNPGLPYYLETDASGVAMGAILSQQGPDNQLH
PIAYMSKSFSGAEGNYNTHDKELLAIIKALEEWRIFLEATDKPIQVFTDHRNLEYWMQAR
TFNQRHARWRVFLSNFNFEIHYCPGKQSGKLDALSRRLDYVDNPQEPEVMLPPEVFANTA
EEELEIVTDICAKLKEDPSLEPIIKFCTEDADNAPPSIRKAYRDYDWEEDLLWYRGKLVV
PDSEPLKERLLREFHNSPLAGHPGQQRTLELISRSYWWPGMKSSAKEWVKCCPVCQANQR
AHAPTISLKPLEVPPYPFHTISYDFITGFPKSQGHDAILVIINSFSKFGHFIPTSKKVTL
KGLADLFVNHVWKLHGLPIKTVSDRGTTFTGKFLRALYQQLGIKPAFSLAYHLESDGQTE
RVNQFIEFYLRLYVAADHSDWATWLLLAEYAYNNAKHSATGKTPFELVYGRNPVMNPSNV
PANVPEADLVADTLAQEWKEAESALRMTKERMAGVKGTTPEYTVGEKVWLDAKNVEIQSN
SNKLDPKRLGPFEVTKKISSHAYRLKLPESLKIHDVFYVGLLSKSHKSPNQPFPERPPPE
TIRGEEEYKVEQIIDSKRQQGKWFYLIKWKGYGPEDNSWEPEVLLEHSQEEIRCFNKSRL
KKACDSAKSL
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagagccgtcccttaccactctccttgaggctatcacagccctcactgccacc
attgggtccttgcaggaccaaatcaaatcacaaggcaagcaaattacacagcttgctgcc
atatgcaaggaaaccaacgaccttgttggtgacaaggaccagggcggagcccaagccaag
cctggcccattgactgggcctgtcacccctcctacccactcaggaggggaaacccacact
ccaggtacggttaggcctgggctcaaggcccccttccgcccttcaagaggaacaggtttt
gactctgaggaagaagaagagccaagaagagcccccaaaaaggagcctatgggaacgcct
aaacgctccctcagttccctcaccccctttgactctgggtcctcagtaaaacaacccaaa
atggaattaccagacccttacaagggggatacaaggggaagaaaggccactcaatggctc
aatcaaatgctactctgggtggcactccacagggatctattcaaggaggaagagcaaatg
gttgtatggatactttaccatatgacagataaagccgctgattgggcgttacccctcatt
gggacaatcatcaagggtgaaggcaacccccctaccaccatcccggctttaacagccaaa
tttaaggaagcctttgccaaccctgatgccaagcgggctgctgccaggaagatagctacc
ctggtccaaacctccaccacctccgagtacgtcacggagttctgcaacctcattgcggaa
ttagactggaacaaggaggcctatattgcacaattcatgcaaggcctccactggaaagtc
aaggaactgttgtccaccaaggatagcattcctgacaaacttgaagccatctttgtggcg
gcaattaagatcaataacatccgccgcaaaaatgaggaaaaccggccaaagaaggcccct
gccaagtccccagctaccgtggccaccaactccaccacttccacccaacaggtccaccta
ttggaagaccccaactatgtcacaccggaggaaagggaccgccgtcgcgcatcaggacta
tgcgtcaagtgcggccaaaaggggcacggtatcaaacaatgccccaatggctggaaagcc
accatcaaggaggaggccaaggtagcagaggaggatagttttgaatttgtatctctggct
ctagactcaaataaaaaacctctattattcactgatctacatgtccaaaatttcccggca
gaacccctcaaaactctcatagactccggagccacattgaatttcatttcccccttgatt
gtggaaaaatataaaataccaaaaacccaactcaaaaatccacaagttgtgagaatgtta
gatggtactatatcccaaactggtcgtatttggcaccaggttcacctcacagttttggcc
aatggccatccccactccattccctttcttgtttgccccataggcaataccccggcaatc
cttggcatgacttggttaaccacagaagctccccttattgactggcaacagggactagtc
accttccctgaacaagcacagattgcctctgaggaagaagcagacctagatcctttggca
gacctcccccctcagtaccatgaatttgctaaagtctttggcaaggaagagtttaaggtc
ctccctccacatagggagtacaatatatccatagaccttgtcccggatgccaaactatcc
ccaggacccttatatggcatgaccaatgcggaatccaaggcgctcaagcagcacatcaac
aaagaattagcaacaggcaagatccgccccagcacttcttccaccggcgccccagtcatg
tttgttaaaaaggcagacggatctcttaggctggttgtggattaccaaaaactcaatgac
gtaacccacaaaaacgtatacccactcccaagacaggacgacctcatggcaaagctgaga
catgctaaaatattcacaaagctcaatctatgctggggttacaataacgtcaggatcaaa
gaaggagacaaatggaagacggcttttagaacaaagtacaggttatttgaatacctggtg
atgccctttggccttaccaatgccccagccacctttcaacacttcatgaatgacctgttt
agggacctcatcaacgtcactgtggttatttacttggacaacatcctgatcttctcagag
gaccccaaggaccatccaacccatgtcagggaagtcctatcacgattgatgaagaatcag
ttattctgtaaactttccaagtgtcacttccatgtcaccacggtagattacttgggtatt
gtcatttccccggcaggcttttctatggatcagaagaagattgaggcggtcacatcatgg
ccaacccccaaaacagtcaagcaggtccaagccttcctaggatttgtcaactacctccgc
caattcatccccaatttcagttcagtagcatgccctctgcacaaccttaccagaaaggaa
accccctggtcatggggcaacctagaggaagcagcatttcaggaattgaagattcttgtc
accaagttgccagttctcatccattccaacccagggctcccctattaccttgagacagac
gcctcaggggttgccatgggagccattcttagtcagcagggcccagataaccaactacac
ccaattgcgtatatgtccaaatcgttctcaggggcagaaggaaactacaacactcacgac
aaggaactcctggccatcatcaaggcactggaggaatggcgtattttcctggaagctacg
gacaagccaattcaggtatttacagaccaccgcaaccttgagtactggatgcaggcaagg
acattcaatcaacggcatgctagatggcgtgtattcctgagcaatttcaattttgaaata
cattattgcccagggaagcaatcagggaagctggatgccttgtccagacgattggactat
gttgacaacccccaagaaccagaagtcatgctaccgccagaggtttttgcgaatacagcg
gaagaggaattagaaattgtcacggatatttgcgccaaactcaaggaagatccatcactg
gaaccaattatcaagttctgtactgaggatgcagacaacgcgcccccttcaattaggaag
gcctatagggactatgattgggaagaagatttgctatggtaccgcgggaaactggtggtt
ccggactcagaacccctgaaagaacgactcttgagggaattccacaactccccactggca
ggacatccaggccaacaaaggacgcttgaacttatcagcaggagctattggtggcccgga
atgaaatcctctgctaaagaatgggtcaaatgctgtccagtttgtcaagccaaccaacgc
gcgcacgccccaactatctccctgaaacccttagaagtccccccttatcctttccacacc
atatcctatgacttcatcacaggtttccccaaatcccagggacacgacgccatactggtc
ataatcaattccttttcaaaatttggtcatttcattcccacctcaaaaaaggtcacattg
aagggtctagcggacttatttgtcaaccacgtctggaagttacatgggctacccataaaa
accgtctctgatagaggtaccacgttcaccgggaagttcctcagggcactataccaacaa
cttggaattaagcccgccttctcattggcctatcacctggaatcagatggtcaaacggaa
agggtcaaccagttcatagagttctacctcagattgtatgtggctgcagatcactcagat
tgggccacatggttgctgctggctgaatatgcatataacaacgccaagcattctgccaca
gggaaaaccccttttgaactggtttatggaagaaacccggtaatgaacccatccaacgtc
ccagcaaatgtcccagaagcagaccttgtagcagacacccttgcacaggaatggaaggaa
gcagaatccgctttaaggatgacaaaggaaagaatggcaggagtaaaaggcacgacccca
gaatacactgttggggaaaaagtatggctagatgcaaagaatgtggagattcaatccaac
tccaacaaattagaccccaagcgcctaggaccttttgaagtcaccaagaagatctcaagc
cacgcataccgcctaaagctccctgaatcactgaaaatccatgatgttttttacgtagga
ctgctttccaaaagccacaaatcaccaaaccagccattcccagaacgcccccctcctgaa
acaataagaggagaggaagaatacaaggtggaacagatcatagattccaagaggcaacaa
ggaaagtggttctacctaatcaaatggaaaggatacgggccagaagacaactcttgggaa
ccagaggtactactggaacacagtcaggaggaaatccgttgcttcaacaagtcacgactg
aaaaaggcttgtgactccgccaagagcctttaa
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