Rhizoctonia solani: RhiXN_08649
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Entry
RhiXN_08649 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Retrotrans_gag
Ty3_capsid
zf-CCHC
DUF4939
Asp_protease_2
RVP_2
gag-asp_proteas
zf-CCHC_2
zf-CCHC_3
RIB43A
Motif
Other DBs
NCBI-GeneID:
67030928
NCBI-ProteinID:
XP_043183850
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Position
10:complement(join(1543211..1544358,1545881..1546563,1546638..1547024,1547109..1547553,1547603..1547966))
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AA seq
1008 aa
AA seq
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MATRSRTASQAQSPFDQGYLEPALPPTTSVEFGKVSLEQVTRLLLGLLGQIERLEQEIAE
IKEAGIETRTNVENISQTVNVVKDGLRSLQTHGPRTPKGLQTKAVEETPRPLPKTEPVGL
ATAPPQVPSPPPSLRLQSPIGTSAPPPPAPVAAYPAPVKVDHPDAYTGKIGSEAKQWLTR
MLAWTRLNSQMFPTNQEVLSFLLMNMKDTAGAWAHPHLNQLGSHRAIIQTVKGFKLEFLA
AFGDPDATRAAKRKITTLTQSGTCTDYITNRQIATRKHQPRTLLELQNAALVINNALRKE
RASHPPRDNKSSKSSNPARGTSTGQSTTGLKKLSDDPNFVSEEERNCRRAAGACIKCGKM
GHKFAECRTGWKATPIEEKGKAKETAKIGKDSKYQLGKDNNRISPLFTISIKPEKQAEHL
EVLIDSGATLSFLHPRTAEALRLPLIDLPTPRTVTMLDGSSPQAGKIWKKASLTFTFDGK
KMTETFLICNTGNHSAILGLKWLDAHNPEIDWNLRTLSFPHTPPEHVAIAKEEEADKKPL
EGVPSKYHQYAKVFGEEEFNKLPPHRHCDIGIELTKEGPLNLPLYSMTDAESATLKDWLR
DKLKAGKIRPSKSPISSPVMFVPKKDAPPPPPAGTSAATSTNPPPAPTSSNSDLKFAKPN
KFGGKKEDALNFIIACQAYIRAKGANRSHKEKILWVTSYFEGAAEDWVCPYKERKVFRGE
AVPLLEDIGIFWAEFTKHYVDTNCDEKYRQKWNNLRQKALVQEYTREFQQYSVSLGYSNE
TLRDKYYDGLKNEIKDIMLSTMFQWRRATAQQVYDKAEEIANHIESTRLSNPSVSTVCAT
PTVVPTSTSNPTPARTCLNVGDNVYMIDPTTRRAKKGAITSIVCTTSGNMPNIRWNGETK
DTMIPFPSLKKDECPAAATPVKTIIAPTPVLASNSKGPGPMDLDGRGFSSLTCHVCGGKG
HFARNCPSKPMSGHVANVEWSWERPKEENRIKVVSDKEESGKGKAKAD
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggctacccgctccaggacagcctctcaagcccaatccccctttgatcaaggatacctg
gaacccgcacttccgccaaccacctctgttgaatttggcaaggtatcccttgaacaagtc
acacggctcctccttggcctccttggccaaattgaacgccttgagcaagaaattgccgag
atcaaggaagccggaatcgagacccggacaaatgttgagaacatctcccaaactgtcaat
gttgtcaaggatgggctcaggtccctacaaacccatggtccccgcacacccaaaggactc
caaaccaaggctgtggaagaaacgccacgccccctaccaaaaaccgagcctgttggattg
gctactgctcccccgcaagtaccatctccccctccatctctgcgtctccaatccccgatt
gggacatccgcccctccacctccggctccagttgccgcctatcccgctccagtcaaggtt
gaccaccccgacgcctacacaggcaaaatagggagcgaagcaaagcagtggctaactcgt
atgttagcctggacccgtctcaactcccaaatgttccccaccaatcaagaggtattatcc
ttcctcttgatgaatatgaaggacactgctggggcctgggcccaccctcacctcaaccag
ctaggctcgcaccgggccattattcagacggtcaaaggtttcaaactggagtttttggcg
gcatttggtgaccctgacgccacaagggctgccaagcggaagatcaccactctcacccag
tccggcacatgcacggactacatcacaaaccgccagattgccacccgcaagcaccaaccc
cgcaccctcctcgagctgcaaaacgcagcacttgtcatcaacaacgctctccgcaaagag
cgcgctagccacccaccaagggataataagtctagcaaatcatccaaccccgcaaggggg
acaagtaccggtcaatcaactaccggtttgaagaagctctccgatgaccccaactttgta
tcggaggaggaacgcaattgccgccgcgccgcaggcgcctgtatcaaatgcggtaaaatg
ggtcataagtttgcagagtgccgcacgggctggaaggccacccctatcgaggaaaagggg
aaggccaaggaaaccgccaagattggcaaagactccaagtaccagttgggaaaagataac
aatagaatttcccccctgttcacaatctcgattaaaccagagaaacaagcggaacactta
gaagtcctgatagactcaggcgccacattgtcattccttcacccccgtaccgctgaggca
ttacgcctacctctcatagacctcccaactccccgcaccgttactatgctcgatgggtca
agcccccaggctggcaaaatctggaaaaaggcgtcactaacctttacctttgatggcaag
aagatgacggaaacattcctcatatgtaacactggaaaccactcagccatcttaggccta
aaatggttggacgcccataacccggaaatagattggaacttgcgcaccctctcattccct
cacacgcccccagaacacgtagccattgccaaagaggaggaagctgacaagaaacccctt
gaaggagtaccctccaagtaccaccaatacgctaaggtatttggagaagaagaattcaat
aagctcccacctcacaggcactgcgacattggaattgaactcaccaaggaaggccccctt
aatttgcctctctatagtatgaccgacgctgagtccgccacgctcaaggactggcttagg
gacaaactcaaggcgggcaaaatacgtcctagcaaatctcccatcagctcccccgtgatg
tttgtccctaaaaaagatgctcctccacctccacctgctggtactagcgcagccacctcc
accaatcccccacctgcccctacatcttctaattcagatctgaagtttgccaagcccaac
aagtttggtggtaaaaaggaagacgccctcaactttattattgcctgtcaggcatatata
agggcaaaaggagctaatagatcccacaaagagaaaatattgtgggtaacgtcatatttt
gaaggtgcagcagaagattgggtttgcccctataaagaaaggaaggttttcaggggagaa
gcggtcccattattggaggatattggcatattctgggcagagttcactaagcattatgtg
gacactaattgcgatgagaagtaccgtcaaaaatggaataacttgcggcagaaggcattg
gttcaggaatatacccgggaattccaacaatactccgtgtccctgggttacagcaatgag
acactgcgcgacaagtactatgacggtctaaaaaatgaaatcaaggatattatgctatcc
actatgttccaatggcgtcgcgctacagcccaacaggtttatgacaaggcagaggaaatt
gctaaccatattgaatctacacgtctatccaacccctctgtctccactgtttgtgccact
cctactgttgtccccacttccacttccaaccccactcccgctcgcacttgtctcaacgtt
ggggacaatgtctacatgattgatcccactactcgccgcgccaagaaaggcgccatcacc
tcaattgtatgcacaacttctggcaatatgcccaacatcaggtggaatggggaaaccaag
gacacaatgatcccattcccatccctcaaaaaagatgaatgccctgctgccgctacgcct
gttaaaaccatcattgcgcctactcctgttctagcctcaaactctaaaggtccaggcccc
atggatcttgatggaagaggattttcaagccttacatgccatgtatgcggcggaaaaggt
cattttgcgcgcaattgtccctctaagcccatgtctggacatgtggctaacgttgaatgg
tcttgggaaaggcctaaagaggaaaatcggatcaaagttgtctctgacaaggaggagtca
ggaaaaggaaaagccaaggccgattaa
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