Rhizoctonia solani: RhiXN_10942
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Entry
RhiXN_10942 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH_2
Chromo
RT_RNaseH
rve
Integrase_H2C2
Motif
Other DBs
NCBI-GeneID:
67033220
NCBI-ProteinID:
XP_043186102
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Position
14:complement(join(986492..987651,987715..988071,988174..988303,988376..988660))
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AA seq
643 aa
AA seq
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MDQKKIEAVMSWPTPKTVKQVQAFLGCVNYLCCFIPNFSAVAHSLHNLTKKDTPWSWGSQ
EEEAFQELKTLVTKSLVLIHSNPKLPYYLETDASGSFSGAKANYNMHDKELLAIIKALEE
WQIFLEATDRPIQVFTDHWKQSGKPDALSRCSDYTDIPQEPEVMLPAEVFANTSQEELEI
VTEIHSQLREDPSLEPIIQFLTEDVENGPLSIQKVYKDYDWEEDLLWYQGKLVVPDSEPL
KEKLLREFHDSPLAGHPAKEWVECCPTCQANCCPHAPVIALKPLEVPPFSFHTISYNFIT
GFPKSQGCNTILVVIDSFSKFGHFIPTSKKITAKGLADLFITHIWKLHGLPVKTVSDWGT
TFMGRFLRALYQWLGVKLAFSSAYHPESDGQTERVNQFIEFYLQSYIAANHSNWAAWLPL
AEYAYNNAKHAATGRTPFELVYGRNPVMNPSNVPANIPEADTVADTLAWEWKEAKAAHRM
SKERMSRNQGTLPEYSIGKKVWIDGKNMELRTNSNKLDPKQLGPFEITEKISSHAYCLKL
PESLKIHDVFYMGLLSKTHKSPNQPFPEQPPPETIEGEEEYKVEQIINSKRQQGKWFYLI
KWKGYGPEDNLWEPEELLEHSQEEISCFNKSQLKKACDSAKSL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaagaagattgaagctgtgatgtcatggcccacacccaaaacagtcaaacag
gttcaggcattcctaggatgtgtaaactatctctgctgttttatcccaaactttagcgca
gttgcacactccctccacaacctcacaaaaaaggataccccatggtcctggggaagccaa
gaggaggaagcgttccaagaactgaaaaccctagtcacaaaaagcctggtcctcattcat
tccaaccccaaattaccctactatctggaaacagacgcgtctgggtccttctctggcgcc
aaagccaactacaacatgcatgacaaagagctattggcaatcatcaaggcattagaagaa
tggcagatatttttggaagcaacagatagacctattcaggtgttcacagatcattggaaa
caatctggaaagcctgatgcactgtccagatgctcagactatacagatataccccaagaa
ccagaagttatgctcccagctgaagtctttgccaacacctcccaggaggagttagaaatt
gtcacagagatccattcccagttgagagaagacccatcactggaacccatcattcaattc
ctgacagaagatgtggaaaatggacctctgtccatccaaaaggtgtacaaggactatgat
tgggaagaggacctactttggtaccaaggaaaactagtagtcccagactcagaaccacta
aaggagaagttgttgagggaatttcatgactccccattagcaggacacccagccaaagaa
tgggttgaatgctgcccaacttgccaagcaaactgttgcccacatgccccagtaattgct
ttgaaacccctagaagtgcccccattttcattccacaccatctcctacaacttcatcaca
ggattcccaaagtcccaagggtgcaacactatcctagttgtaattgactcattctccaag
tttggccactttatccccacctccaagaagatcactgctaaaggccttgcagacctgttc
atcacccacatctggaaactccacgggctacctgtcaaaacagtctctgattggggaaca
acctttatggggagattcctgagggcactctaccagtggcttggtgtcaaactggcattc
tcttcagcctatcatccagaatcagacggtcaaacagaaagggtgaaccagttcattgaa
ttctacctacaatcctacattgcagccaaccactccaattgggctgcttggttaccattg
gcagaatatgcatacaataatgccaaacacgcagcaacaggaagaacaccttttgaacta
gtctatggacggaatccagtaatgaacccatctaatgtcccagccaacatcccagaggca
gacacagtagcagatacactggcctgggaatggaaagaagccaaggcagcccacaggatg
agcaaggaaaggatgtctaggaaccaaggaacacttccagaatattcaataggcaagaaa
gtgtggatagatgggaagaacatggaactcagaaccaactccaacaaactagaccccaaa
cagttaggtccctttgaaatcacagaaaaaatctccagccacgcatactgtctaaaactc
ccagaatccttgaaaatccatgatgtgttctacatgggtctcctatccaaaacccacaaa
tccccaaaccaaccattcccagaacaaccccctcctgaaacaatagaaggggaggaagaa
tacaaggtggaacaaatcatcaactccaaaagacaacagggaaaatggttttacctaatc
aaatggaagggatatggcccagaagacaacttgtgggaacctgaagaactactggaacat
agtcaagaagaaattagctgcttcaacaaatcacaactgaaaaaggcttgtgactctgcc
aaaagcctttaa
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