Rhizoctonia solani: RhiXN_11152
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Entry
RhiXN_11152 CDS
T09256
Name
(RefSeq) nucleoporin nup44
KO
K14308
nuclear pore complex protein Nup54
Organism
rsx
Rhizoctonia solani
Pathway
rsx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
RhiXN_11152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_11152
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
RhiXN_11152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Nup54_C
Motif
Other DBs
NCBI-GeneID:
67033430
NCBI-ProteinID:
XP_043186312
LinkDB
All DBs
Position
14:complement(join(1700261..1700404,1700463..1700540,1700599..1700899,1700967..1701076,1701138..1701895,1701966..1702013,1702070..1702085))
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AA seq
484 aa
AA seq
DB search
MAFSFGQPSTSAPTTTSAPAFGGSTFSFGANNPNTAGTTGAAGTTGTGLFGQATATQPTT
GTGTATGTGLFGNTGTSGTTGTAGGGLFGNTNTTTAGTGTTGGLFGNNTTTATASAPATG
GLFGAANTNTTGTTGGGLFGNTNPAAAAPASGGLFASTTTAPTAATGGGLFGNTTTTQQP
SGGLFGSTTTAPTSGGLFGAKPAAPSLFGQPAANPLAQSTLSASTLGPPPAQPAKNNLQV
SVFGTPGSGGLTLEQRIEAIFQAWSPASPDCRFQYYFYNLVENPQAYGRPANATNEALWK
RAISENPNPERLVPALAIGFDDLKKRTLSQQQENQSHMAALAQLRTRLAAVTAKHDTTRL
ARLAQTHTELSRRVRALARQLHMLIPAVRRSALTPRKRSEEKVVGVGGRGWARGKEAAGG
RVEWAVVDEEGLASIAQILKDQQNGLAHVTKILQDDLRALKIIKRVSLRTINLLGLMYCF
LDTF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccttttcgttcgggcaaccttctacctcggcacccactacaacctcggcgccggcg
tttggcggctcaacattcagctttggagccaacaacccaaacactgcaggaacgacagga
gctgcgggtaccaccgggacaggactatttggtcaagcaacagctacgcaacctaccacg
ggcacgggcacggccactggtactggattattcggtaacactgggacttccgggacgaca
ggaacagccggaggaggacttttcggtaatacaaacacaaccacggctggaactggcacg
accggcggtctgtttgggaacaacacgactacagcgaccgcctctgctcccgcaactggt
gggttattcggcgcagcgaataccaatacgaccgggaccacaggaggaggcttgtttggt
aacaccaatcctgccgccgctgccccagcttcgggtggactctttgcttccactactacc
gcgcctactgctgcaaccgggggtgggcttttcgggaatacaacaactacccaacaaccg
tctggcggattgtttggctccactaccactgcacctacctcgggcggtcttttcggtgcc
aaaccagctgccccctccttgttcggtcagcctgcggcaaatccgctcgcgcagtcgaca
ttatcagcctcaacactcggtcctccccctgcccaacccgcgaagaataacttgcaggtc
tcggtgtttggaacgcctggttctggtggtttgacacttgaacaaaggatcgaagccatc
ttccaggcatggagtccggcttcacctgattgtcgcttccagtactacttttacaacctg
gttgaaaacccacaagcctatgggcgtcctgcaaacgctacaaacgaagcactatggaaa
cgcgcgatcagcgagaatccaaatccagaacgactagtcccggccctggcaataggtttc
gacgaccttaaaaagcgaaccctctcgcaacaacaagaaaaccaatctcacatggctgcc
cttgctcaactacgcacgcgactcgccgccgtaacagcaaaacacgacacgacccgtctc
gcccgtctggctcagacccacaccgagttgtcgagaagagtgcgggccctcgcaaggcag
ttgcacatgcttatcccagccgtgcgcaggagcgcgttgactccgaggaagaggagtgag
gagaaagttgttggcgttggaggaaggggctgggctcgtggtaaagaggctgcgggaggt
agagtggagtgggctgttgtcgatgaagaagggctggccagcattgctcagatcctaaag
gatcaacaaaacgggctagcgcacgttacaaagattttacaggacgatttgcgcgcgctg
aaaatcatcaagagggtgtccctacgcacaattaacttgctcggacttatgtattgcttt
ctagacacgttctaa
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