Rhizoctonia solani: RhiXN_11660
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Entry
RhiXN_11660 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
Chromo
rve
RVP_2
Asp_protease_2
gag-asp_proteas
Motif
Other DBs
NCBI-GeneID:
67033938
NCBI-ProteinID:
XP_043184985
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Position
12:complement(1325918..1329268)
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AA seq
1116 aa
AA seq
DB search
MSPLFTILIKPEKKAEPLEVLIDSGATSSFLHPRTAELLRLPLIDLPTPRTVTMLDGSSP
QAGKIWKKAVLTFSFDGKKMTETFLICNTGSHAAILGLKWLDAHNPEIDWNRRTLTFPHT
TPEHVAIAEEEEADKNPLEGVPSKYHQYAKVFGEEEFNKLPPHRHYNIGIELTEEGPLNS
PLYSMTDAESATLKDWLRDELKAGKIRPSKSSISSPIMFVPKKDGSCRLVVDYRRLNNRT
KKNIYPLPRPDDLMAQLRGAKIFTKLDLRWGYNNVRVKEGDEWKTAFQTKYGLYESLVMT
FGLTNAPAAFQHFMNDLFKDLLDVCVIIYLDDILIYSKDDATHTQHVHEVLRRLMENQLF
CKASKCTFHVTSVEYLGIIVLDKGFSLDKLKIQVIQEWPTPTKVKEVQLFLGFANFLRRF
VANFSHMARPLHNLVKKDIPWKWDTREQEAFQGLKDAITNAPVLCHANPAKPYFLETDAS
GAALGSILSQRQEDRQLHPLGFLSESFKGAEQNYDTHNKELLAIIRSFEYWRIFLEGTAH
PITVFTNHRNLEYWKESRTFNRRHAQWHLLLAGYNFQIVYCPGKQSGKPDALSRRSDHAN
IPPADQTMLPDPVFANVALVLPEKELQRQIEQSLDQDESLEEILQFLQNKSKAPPSIKRA
FKDYEMEAGLLFYQGQIVVPDVGTLRTDLLQIFHNSPLAGHPGRQQTLELVLRNHYWPGI
RADTYWHVDSCETCQQIRKPKYASIPPQPLELPTRPWQHVSYNMIVDLPKDGNYNSILVI
IDSFTKYGIFVKCSKKLRAPELAELFLEHVWKRHGMPEKTVSDRGRVFNNKFLKALYKRL
GIDPHFSSAYHPQSDGQTERVNPSIEHFLRAYSGVNQRDWTKWLPMAEFAYNNAMHSSTG
KTPFKALYGWEPTLTPSNVPTDVPEADELAQTMEAQWKEVELALRQAKQRMTAGESGSPT
EFKVGEEAWLDAKNVNLKTLSPKLTEQRLGPFKVTKKISDRAYRLELPPTMRIHNVFYVG
LLSKVKRDNKRAFENRPPPVTVDGEEEYEVEGITDAEERNGKWFFRVKWKGYGSEENTWE
PQENLKNAKKILEKYEKEMKKKALGAAKALRGGAVS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccctgttcaccattttgatcaaaccagagaaaaaagcggaacccctagaagtc
ctgatagattcaggcgccacctcatccttcctccacccccgtaccgcggaactactccgc
cttccactcattgacctccctacaccccgtaccgtcactatgcttgatgggtcaagcccc
caggcaggcaagatctggaagaaggcagttctaaccttctcctttgatggcaagaagatg
acagagaccttccttatatgtaacacagggtctcatgctgctatcttaggattgaaatgg
ttggatgcccacaacccagagattgattggaacaggcgcacccttaccttccctcataca
acccctgaacatgtggccattgccgaggaagaggaagcagataagaacccccttgaagga
gtaccctccaagtaccatcaatacgccaaggtattcggggaagaagaattcaacaagctc
cctccacaccggcattacaatattggaatagaactcacggaagaaggcccccttaactcc
cctctttacagtatgacagacgccgagtccgccacactcaaggactggctcagggatgag
ttgaaagctgggaagatccgccctagcaaatcttccatcagttcccccataatgtttgtc
ccaaaaaaggatggttcctgccgcctggttgttgactaccgtcgccttaacaatcgcacc
aagaaaaacatttatccgcttccccgcccagatgatcttatggcccagctccgtggcgcc
aagatctttaccaaactagacttacgatggggttacaacaatgtgcgagttaaagaaggt
gatgagtggaagaccgcattccaaaccaagtacggcctctatgaatccctggtgatgact
tttggtttgacaaacgcccctgccgcctttcagcatttcatgaacgacttgttcaaggac
ctcctggatgtatgcgtcatcatttaccttgatgacatcctaatctactctaaggatgac
gcaacacacacccagcacgttcatgaagtcctacggcgcttaatggagaaccaattgttc
tgtaaggcatccaagtgtactttccacgtcacctcagtggagtatctaggaataattgta
ttggataagggattcagtctggataagctcaaaatccaggtgatccaagaatggcctaca
cccactaaggtcaaagaagtacaattgttcctgggttttgccaatttcctacgccgcttt
gttgccaactttagccatatggccaggccattacataacctggtcaaaaaggacatacca
tggaaatgggatactagggagcaagaagcattccaagggttaaaagacgccattaccaac
gcaccagtactatgccacgccaatcctgccaaaccttatttcctggaaacggacgcctca
ggtgcggccttagggtctatactcagtcaacgccaggaagacagacaattacacccctta
ggattcctgtcagaatcgttcaagggagcggaacaaaactatgatacccacaacaaagaa
ctactggctatcatacgatcttttgaatactggcgtatattcctggaaggaactgcacac
ccaatcaccgtgtttaccaatcaccgcaatctggagtactggaaggagtcaagaaccttc
aaccgtcgccacgcacaatggcaccttctactagccggttacaacttccagattgtctat
tgccccggaaaacaatcagggaaaccggatgccctttcacgccgttcagatcacgccaac
attcctccagctgaccaaaccatgctcccagaccctgtctttgccaacgttgcactggtc
ttgccagaaaaagagttacaacgccagattgagcaatccctagaccaagatgagtctttg
gaggaaatcctccaattcctccaaaacaaatcaaaggcaccaccttccatcaaacgagca
ttcaaggattatgaaatggaagccgggttgttattctaccaaggacaaattgtagtacca
gatgtaggcaccctaaggacggacttgctacaaatattccacaatagccccttagctgga
catcctggtagacaacaaaccctggaattggtcttgcgcaaccactactggcctggcatc
cgtgcggacacctattggcacgtggactcctgtgaaacttgtcaacaaatcaggaagccc
aagtatgcgtctatcccacctcagcctctagaacttccgactagaccctggcaacacgtt
tcttacaacatgatcgtggacttaccaaaggacggaaactacaactcaatcctggtcatc
attgatagcttcaccaagtacgggatatttgtcaaatgctccaaaaagctgagagccccg
gaactagcggaactattcctggaacacgtatggaaacggcacggcatgcccgagaaaaca
gtctcagatagagggagagtgttcaacaacaagttcctaaaggcgctgtacaaacgcctg
ggaatagacccccacttctcctcggcgtatcatccccagagcgacggacagacagagcga
gtcaacccttccattgaacacttcctaagggcctattcgggggtcaaccaacgggactgg
actaagtggctgccaatggcggaatttgcatacaacaatgccatgcacagtagtactggg
aaaactcctttcaaggccttatacggatgggaacccaccttaaccccgtccaacgtaccc
acagatgtcccagaagcggatgaacttgcccaaacaatggaagcacaatggaaggaagta
gaattggccctccggcaagccaagcaacggatgacagccggagaaagcggaagcccaacg
gaattcaaagtcggagaagaagcttggctcgacgccaagaatgtcaacctcaaaacctta
agccccaagctaacagaacaacgtttgggcccgtttaaggttaccaagaaaatctccgac
cgcgcttaccggcttgaactacccccaacaatgcgcattcacaacgtcttctacgtgggg
cttctatctaaggtcaaaagggacaacaaacgcgcctttgagaaccgcccaccaccagtc
accgtggatggggaagaagaatacgaggtggaggggatcactgatgctgaagaaaggaac
gggaaatggttcttccgagtcaaatggaagggctacggatcagaagaaaatacatgggag
cctcaagaaaacttaaaaaacgccaaaaaaattttagaaaaatacgaaaaggaaatgaaa
aagaaggcccttggcgctgccaaggcccttagagggggggcagtgtcgtag
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