Rhizoctonia solani: RhiXN_11881
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Entry
RhiXN_11881 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH_2
RVT_1
RT_RNaseH
Integrase_H2C2
Chromo
rve
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
67034159
NCBI-ProteinID:
XP_043186457
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Position
15:121802..124993
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AA seq
1063 aa
AA seq
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MLDGSSPQAGKIWKKANLTFSFDGKSMTETFLICNTGSHAAILGLKWLDAHNPEIDWNAQ
TLSFPHTPLEHVAIAKEEEADKDPLEGVPPEYHQYAKVFGEEEFNKLPPHQHYNIGIELT
KEGPLNLPLYSMTNAESSTLKDWLRDKLKAGKIHPNKSSISSPVMFVPKKDGSCCLVVDY
CCLNNWTKKNVYPLPCPDDLMAQLCGAKIFTKLDLQWGYNNVQVKEGNKWKTAFRTKYSL
YKSLVMTFGLTNAPTSFQHFMNNLFKDLLDVCVIIYLDDILIYSKDDASHMQHVHKVLRR
LMDNQLFCKASKCTFHVTSVEYLGIIVLDKGFSLDKLKIQAVQEWPTPTKVKEVQSFLGF
ANFLRWFVANFSHLARPLHNLVKKDTPWKWDTKEQEAFHGLKDAITNAPVLCHTDPTKPY
FLETDASGAALGSILSQQQEDGCLHPLGFLSKSFKGAEQNYNKHDKELLAIICSFEYWRI
FLEGTLHPITVFMDHQNLEYWKESRTFNRCHAQWHLLLAGYNFQIVYCPGKQSGKPDALS
RRSDHANIPPANQTMLLDPIFANVALVTPEKVLQRQIESALDQDKSLEEILQFLQNKSKA
PPSIKRAFKDYKMEAGLLFYQGRIVVPDVGALRTDLLCIFHDSPLAGHPGRQRTLELLSR
NYYWPRICADTYWHVDSCKTCQQIRKPKYASLPPQPLELPSRPWQHVSYNMIVDLPKDGN
CNLILVIIDSFTKYGIFVKCSKKLKAPELAELFLENIWKRHGMPKKTVSDRGRVFNNKFL
KALYKRLGIDPHFSLAYHPQSNSQTEQVNLSIEHFLRAYSGINQRDWTKWLPMVEFAYNN
VVHSSTGKTPFKALYGWEPTLTPSNVPTDVPEADKLAKSMEAQWREVEAALQQSKVQMVA
GEMGIPIEFEVGEEAWLDAKNVKLKTLSPKLTEQQLGPFKVIEKISNQAYRLELPSTMQI
HNVFYVGLLSKVKQDNKQTFKNRLPPITVDGEEEYKVEGITDAEEQDGKWFFRVKWKGYG
SEENTWEPQENLKNAGKILKKYEEEMKKKALGAAKALKGGAVL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgggtcaagcccccaggcaggcaaaatctggaaaaaggccaatttaaccttc
tcctttgacggcaaatcaatgactgagaccttcctcatctgcaacacagggtctcatgct
gccatcttaggactgaaatggctagacgctcataacccagaaattgattggaacgcgcaa
accctctccttccctcacacaccactggaacacgtggccattgccaaagaagaggaagct
gacaaagacccgcttgaaggagtacccccagaataccatcaatatgctaaggtatttggg
gaggaagaattcaacaagcttccaccacaccagcactacaacatagggattgaactcacc
aaagaaggcccccttaacttgcccctctacagcatgaccaacgctgagtcatccacgctc
aaggactggcttagggacaaactcaaggctggaaagatccatcccaacaagtcatctatc
agttcccccgttatgtttgtacccaaaaaagatggttcctgttgccttgtagttgactac
tgctgcttgaacaattggactaaaaagaatgtctatccactaccttgccctgatgacctc
atggcccagctctgtggtgccaagatcttcacaaagctggacctacaatggggttacaat
aatgtccaagttaaggaaggcaacaaatggaaaacggctttccgcaccaagtacagccta
tacaagtctctggtcatgacatttggtttgacaaatgctcccacctctttccaacacttc
atgaacaacctgttcaaggacttattggatgtatgcgtcatcatttaccttgatgacatc
ctaatctactccaaggatgatgcttctcacatgcaacatgtccacaaagtcctaaggcgt
ctaatggataaccagttgttctgtaaggcttcaaagtgtaccttccatgtgacatctgtg
gagtatctggggatcattgtattggataagggatttagcttggataagctcaagattcaa
gcggttcaagaatggcctacacctactaaggtcaaggaggtccagtccttccttgggttt
gccaatttcctccgttggtttgtggccaacttcagtcacctggctagacccctacacaat
ctggtcaagaaggatacaccatggaaatgggataccaaagagcaagaagccttccatgga
ctgaaggatgccattaccaacgccccagtactctgtcacacagaccctacaaaaccttac
ttccttgaaacagacgcatcaggtgcagccttgggttctatactaagccaacaacaggag
gacggatgcctacaccccttagggttcctatccaaatcattcaaaggggcggaacagaac
tacaataaacatgataaggagttgctggccatcatctgttcctttgagtactggcgtatc
ttcctggagggaaccctacatcccattactgtcttcatggatcaccagaacttagagtat
tggaaggagtctagaactttcaaccgctgccatgcacaatggcatctccttctagccggc
tacaacttccaaattgtttactgccctgggaaacagtcagggaaaccggacgccctttca
cgccgctcagaccacgccaatattcctcctgccaaccagaccatgcttctggaccccata
tttgccaatgtagctttagtcacccctgagaaagtactacaacgccagattgaatctgcc
ctggatcaggacaaatcactagaggagattctacaattcctacaaaacaagtcaaaagcc
ccgccttccatcaaacgcgccttcaaagactacaaaatggaagcagggttattgttctac
cagggacgcattgtagtaccagatgttggggcattaagaacggacttactttgtatcttc
catgacagtcccctagcagggcacccagggagacaacgtaccctagagttgttgtcaagg
aactactactggcccagaatctgcgctgatacttactggcacgtggattcttgcaaaacc
tgccagcaaataaggaagcccaagtacgcgtcattgccaccccaaccattagaactccct
tccagaccctggcaacatgtttcctacaatatgattgtggacctgcccaaggacggaaac
tgcaacttgatcttggtcattattgacagcttcaccaagtacgggatatttgtcaaatgt
tccaaaaaacttaaagcccctgagctagcagaactgtttctggaaaacatatggaaacgg
catggcatgcccaagaaaacagtctcagacagaggaagggttttcaataataaattccta
aaggcactgtacaaacgcctgggaatagacccccacttctccttggcataccacccccag
agcaacagccaaacagaacaagtgaacctgtcaatagaacatttccttagggcttactca
ggaattaaccaaagggactggaccaagtggctcccaatggtggaatttgcgtacaacaat
gtggtacatagcagcacagggaagacccccttcaaagccctgtacggttgggaacctaca
ctaaccccgtctaatgttccaacggatgtaccggaagcagacaaacttgccaaatcaatg
gaagcccaatggagagaagtagaagccgccctgcaacagtccaaggtacaaatggttgcc
ggagaaatgggaatcccaatagaatttgaggttggagaagaagcatggttggatgccaaa
aacgtcaaactcaaaaccctgagtcccaaattgacggagcaacaactgggaccctttaag
gttattgagaagatctccaaccaagcataccgcctagaactcccttcaacaatgcaaatc
cacaatgtcttctatgtaggattactgtccaaagtcaaacaagacaataagcagaccttc
aaaaaccgcctgccaccaatcactgtggatggggaagaggaatacaaggttgagggcata
acagatgcagaggaacaagatgggaagtggttctttagggtgaaatggaagggatacggg
tcagaagaaaacacgtgggagccccaggagaatctgaaaaatgccgggaaaattttaaag
aaatatgaggaagaaatgaaaaagaaggcccttggcgctgccaaggcccttaaagggggg
gcagtgttgtag
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