Rhizoctonia solani: RhiXN_12076
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Entry
RhiXN_12076 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH
RT_RNaseH_2
Chromo
RVP_2
gag-asp_proteas
Asp_protease_2
Motif
Other DBs
NCBI-GeneID:
67034354
NCBI-ProteinID:
XP_043186652
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All DBs
Position
15:complement(join(877161..877532,877592..877645,877705..878031,878100..878282,878354..879995,880046..880269,880321..880446))
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AA seq
975 aa
AA seq
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MSNQPADTLKTLIDSGATSNFISPLIVEKYKIPKTQLKNPQVVQLTVLANGHSHTIPFLV
CPIGNTSAILGMTWLTSESPLIDWQQGTVTFPEQAQIALEEEADPNPLADLPPQYHKEYD
ISIDLTLDAKLTTGPIYGMTNAESKALKQHIDKELATGKIRPSTSSAGAPVMFVKKADSS
LQLVVDYWKLNDVTQKNVYPLPRQDDLMAKLRNAKMFTKLDLHWGYNNVRIKEGDKWKTA
FRTKYGLFEYLVMPFGLTNAPAAFQHFMNNLFRDLIDITVVIYLDNILIFSKDPNKHPEH
VREVLLRLLKNQLFCKLSKCHFHVTTVDYLGIVISPAGFSMDQKKIEAVTSWPTPKTVKQ
VQAFLGFVNYLCCFIPNFSSVARPLHNLTKKETPWSWGNLEETVFQELKSLVTRSLVLVH
SDPNLPYYLETDASGVAMGAILSQQGEDNRLHPVAYMLKSFSGAEANYNTHDKELLAIIK
ALEEWRIFLEATGKPIQVFTDHQNLEYWMQARTFNRRHAQWRIFLGNFNFEIHYCPGKQS
GKPDALSRRADYVDMPPDPEVMLPAEVFANTSKEEVEIVTEICSRVREDPSLEPIIQFLT
EDADLAPPSIWKAYRDYNWEEDLLWYQGKLVVPDSETLKERLLKEFHNSPLAGHPGQQGR
LNLSANQRAHAPVISLKPLEVPPFPFHTISYDFITGFPKSQGFDAILVVIDSFSKFGHFI
PTTKKDNIRQGTTFTGKFLRALYQRLGIKPSFSLAYHPESDGQTERVNQFIKFYLRSYIA
ADHLDWASWLPLVEYAYNNAKHSATGRTPFELVYGRNPVMNPSNVPANVPESDNEKMAGT
KGVTPEYSIGEKRLGPFKITKKISSHAYRLELLETMKIHNVFYVGLLSKVHKSPSQPLPE
RRPPETIEGEEEYKVEQIIDSERQQGKWFYLIKWKGYGPEDNSWEPKELLEHSQKEIQRF
NKSQLKKACDSAKSL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcaaccagcagacaccctcaaaactctcattgactcaggagccacgtcaaac
tttatctcccctttgattgtggaaaaatataaaataccaaaaacccaactcaaaaatcca
caagttgttcagctcacggtcttggccaatggccattcacacaccatccccttcctagtc
tgccccattgggaacacctccgctatcctagggatgacctggcttacatcagaatcccca
ctcattgattggcaacagggaacagtcacattccctgaacaggcccaaattgccttggaa
gaagaagcagaccctaatcctttagcagacctcccccctcagtatcacaaggagtatgat
atctcaattgacctcactctggatgccaaactcacaacaggtccaatctacggcatgacc
aatgcggaatctaaggcactgaagcaacatattgacaaagaactagccacgggcaagatc
cgccccagtacttcatcagcaggtgccccggtaatgtttgtaaagaaggcagacagctcc
ctacaactggttgtggactattggaaactgaatgacgttacccagaaaaatgtctaccca
ctccccagacaggatgaccttatggccaaacttagaaacgctaaaatgttcactaagcta
gatttgcactggggttacaacaatgtcaggatcaaggaaggggacaaatggaagactgcc
ttcaggactaaatatggcctatttgaatacctagtaatgccctttggtctgacaaacgcc
ccggcagcattccaacattttatgaacaacctattccgcgacctcattgatatcacagta
gtcatttacttggacaacatcctaatcttctccaaagaccctaacaaacacccagaacat
gttagggaagtcttattgcggttattaaagaatcagctgttctgtaagctgtccaaatgt
cacttccatgttaccactgtggattatctaggaatcgtcatctcacctgcaggcttctca
atggatcaaaagaagatagaagccgtcacctcctggcccacacccaagacagtcaagcaa
gtccaggccttccttggttttgtcaactacctttgttgcttcatccccaatttcagttca
gtagcacggcctctccacaatctcaccaaaaaggaaaccccctggtcatggggtaaccta
gaagagacagtgtttcaggaattgaagtccttagtaacaaggtcactggttctagtccac
tcagatcccaatttgccctactatctagaaacagatgcgtcaggagtagccatgggagca
atcctgagtcagcaaggagaggataaccgcctacacccagtagcctatatgttgaaatcc
ttctctggtgctgaggccaactacaacacccatgacaaggaactcctagccatcatcaag
gccctggaggagtggcgtattttcttagaagcaacgggtaaacccatacaggtgttcacg
gatcatcaaaacttggaatattggatgcaggccagaacattcaatcgcaggcatgcccaa
tggcgcatattcttgggcaatttcaactttgagatccactattgcccaggaaagcaatca
ggaaagccagacgcgctatctaggagggcagattacgtagacatgccgccagatccagag
gtcatgttaccagcagaggtctttgccaatacctccaaagaagaagttgaaattgtcaca
gaaatttgctccagagtcagggaagatccatctctggaacctatcatccaatttctcaca
gaggatgcagaccttgcacccccctccatttggaaagcttacagggactacaattgggaa
gaggacctcctatggtaccaagggaagctagttgtcccagactcagaaaccctgaaggaa
cgtcttctgaaggaattccacaactctccactggcaggacatccaggacaacaaggacgc
ttgaacttgtcagccaatcaacgcgcacatgctccagttatctccctgaaacccttggaa
gtcccccctttccctttccacacaatttcctatgacttcatcacaggcttccctaaatct
caaggatttgacgcaattctggtagtaatagattccttctccaaatttggacacttcatt
ccaactaccaagaaagacaatatcagacagggaaccacatttacagggaaattcctaagg
gcactgtaccaacgtcttgggatcaagccctcattctcattggcttaccacccggagtca
gacggtcagacggagagggtgaatcaattcatcaagttctacctgagatcatacatagca
gcagaccacttggactgggcctcctggttgccattagtggaatacgcatacaacaatgct
aaacactccgccaccggaagaaccccctttgaattggtatatggaaggaacccggtcatg
aacccgtccaatgtcccagcaaacgtaccagaatctgacaatgaaaaaatggcaggaacc
aagggagtcaccccggaatattcaattggagagaaacgcctaggacccttcaaaatcacc
aaaaaaatctccagccatgcgtaccgcctggaactcctggaaaccatgaaaatccacaat
gtattctatgtaggactactgtccaaagtccacaaatcccctagtcaaccactcccggaa
cgccgtccacctgaaacaatagaaggagaggaggagtacaaagtagagcagatcattgac
tctgaaagacaacaaggaaaatggttctacttgatcaaatggaagggatatggtccggaa
gacaactcatgggaacccaaagaactgctggaacacagccagaaagaaattcaacgcttc
aacaagtcacaactgaaaaaggcttgtgactccgccaagagcctttaa
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