Raphanus sativus (radish): 108807071
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Entry
108807071 CDS
T06014
Name
(RefSeq) histone-lysine N-methyltransferase ASHR1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00310
Lysine degradation
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108807071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108807071
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108807071
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
108807071
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108807071
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
108807071
NCBI-ProteinID:
XP_018434814
UniProt:
A0A6J0JJ10
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Position
6:25405761..25409155
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AA seq
489 aa
AA seq
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MEEATLMADLQSFLRDRCLTVSNLPEKGRSLFTSTHFRPGEVILRQEPYVSVPNNNSSES
RCDGCFKNNGLKKCSGCQVVWYCGSSCQKSEWKLHRHECKALCRLEKEKRLLVTPTIRLM
VKLYLKRNLQNEKVIPTTTTDNYSLVEALVSHMSELDEKQLMLYAQMANLVNLILQFPSL
DLKEIAENFSKFSCNAHSICDSELRPQGIGLFPLVSIINHSCSPNAVLVFEEKMAVVRAM
ENISKDSEVTISYIETAGSTLTRQKSLKEQYLFHCQCARCSNIGKPHDIEESAMLEGYRC
ANEKCNGFLLRDPDDKGFVCQKCMLLRSKEEVKKLAGDLKTVSEKAPASPSAENKQDAIA
LYKTMEKLQEKLYHSFSISLMRTREKLLKMLMEVESWREALDYCKLIVPVYQRVYPETHP
LIGLQFYTQGKLEWLLGQTEEAVSSLIKAYDILRISHGTSTPFMKDLSEKLDEARAEASY
KLLALKDGN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctacactaatggcggatttgcagagctttctacgagatcgctgcttaacc
gtgtccaatctcccagaaaaaggccgctctctattcacctccacacactttcgtccagga
gaagtgattctaagacaagagccttatgtttctgttccgaacaataactcgtctgaatca
agatgtgatggatgtttcaagaacaatggcttgaagaaatgttctggttgtcaagtggtt
tggtactgtgggagctcatgccagaagtcagagtggaagttgcatcgccatgaatgcaaa
gctctctgtaggcttgagaaggagaaacgtctgttagtgactcctacaatacgtctgatg
gtgaagctttacctcaagaggaacctacaaaatgaaaaggtcatacctaccacgacaaca
gacaattacagtttggtggaggctttggtgtcccatatgtctgagcttgatgagaagcag
ttgatgttgtacgcgcagatggctaatcttgtgaacttgatacttcagtttcctagtctt
gatcttaaagagattgccgagaacttttcaaagttctcgtgcaatgctcatagcatttgt
gatagcgaattgagacctcaggggataggactgtttcccttggtttccatcattaatcac
agctgctctcccaatgcggtattagtgttcgaagaaaagatggcggttgttcgagcaatg
gagaacatatcaaaggattcagaggtaactatcagttatattgaaaccgctggaagcact
ctaactcggcagaagtctctgaaagaacaatacctcttccactgtcagtgcgccagatgt
agtaacattggaaaacctcatgatatcgaagagagtgccatgttggaaggctatcggtgt
gccaatgagaagtgtaatggcttcttactccgtgatcctgatgataaaggttttgtttgc
cagaaatgcatgcttcttaggagcaaggaagaggttaaaaagttggcgggtgatctgaaa
acagtttcagagaaggctcctgcatctccttccgcagaaaataaacaagacgctattgcg
ctgtataagacaatggagaaactacaagagaagctttaccattctttctccatctcttta
atgagaacccgtgaaaaacttctcaagatgctgatggaagtagaaagctggagagaagct
ttggattactgcaaacttatagtccctgtttaccaaagagtatatccagaaacacatcct
ttgattggcctgcagttctatacccagggaaaattagaatggttgctggggcaaaccgaa
gaggcggtgagttcactgattaaggcatatgacattctgcggataagccacggaacaagt
acaccattcatgaaagatctctcagaaaagttggatgaagctcgtgcagaggcttcttat
aagttgcttgcattgaaagatggcaactag
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