Raphanus sativus (radish): 108813148
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Entry
108813148 CDS
T06014
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108813148
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108813148
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108813148
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108813148
Spliceosome [BR:
rsz03041
]
Common components
Common spliceosomal components
SR proteins
108813148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_5
Motif
Other DBs
NCBI-GeneID:
108813148
NCBI-ProteinID:
XP_018441115
UniProt:
A0A6J0JZE2
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All DBs
Position
6:25758470..25760736
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AA seq
231 aa
AA seq
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MADSPRMRDSQSPSPLRELSRSRSRSRSRSRSRSRSRSRSWSVPRHRSRSRSRGRSRDRG
RTETENPGNTLYVTGLSTRVTERELETHFSKEGKVASCFLVVEPRTRASRGFAFVTMDSY
EDADRCIKYLNQSVMEGRYITVERSRRKRPRTPTPGHYLGLKNDRDYGGRDRDRGRHYGR
DDYGERRSARRSPLRGRRDYSPPPRRERSRRDRSYSPYGSPERRRHHRGSG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctccgagaatgagagattcacaatctccttcacccctgagggaactttcc
aggtctcggtccagatcaagatctaggtctaggtctaggtctaggtctaggtcaaggtct
tggtctgtcccaaggcatagatcaagatcaagaagccgcggaaggtcgagggaccgtgga
aggactgaaactgaaaaccctgggaatactctctatgtgacgggcttatctacaagggtc
acagagagggagcttgaaacccatttctccaaggagggaaaggttgcctcgtgctttctc
gtggtggagccccgcactcgtgcgtctcgtggttttgcctttgttacgatggatagctat
gaagatgctgaccgctgcattaaatacctgaaccagtctgttatggagggccgttacatt
actgttgaaaggtcaaggaggaagcgtccaagaactcccactccaggacactatcttggt
ctgaagaacgacagggattatgggggtcgtgaccgagaccgtggtagacactatgggcgt
gatgattatggagagcgtaggtcagcaagacgatcacctttgagaggaaggcgtgactat
tcacctccacctcgtagggaaaggtcgaggagagatcggtcttactctccttatgggagt
ccagaaaggaggagacaccaccgtggttcagggtga
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