Raphanus sativus (radish): 108815804
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Entry
108815804 CDS
T06014
Name
(RefSeq) nuclear-pore anchor-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108815804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108815804
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108815804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
108815804
NCBI-ProteinID:
XP_018443800
UniProt:
A0A6J0K730
LinkDB
All DBs
Position
7:complement(14616620..14630006)
Genome browser
AA seq
2077 aa
AA seq
DB search
MPLFMPDDDLARLSNDAASVVVVAERADEYIRKLYADLDSVRAKADAASITAEQTCSLLE
QKYLSLSRDFASLESHNAKLQSDLDDRLAELAQSQAQKHQLHLQSIEKDGELERVTTEMS
ELHKSKRQLMELLEQRDSEISEKNSNIKSYLEKIVKLTDASSEKESRFAEAGAELARSQA
MCFRLSQEKELMERHTKWLDEELTAKVDSYAELRRRHSDLEAEMSAKLVDVEKNYNECSS
SLNWHKERLRELETKITSLQEELSSCKDAATTTEEQYSAELLTANKLVELYKESSEEWSR
KAGELEGVIKALEARLSQVESGYKDRLEKEMSTNQKLEKENEDIKQKLEKYEAEIEKTRK
TDELTLVPFSSFTRGVDVSGTSNMIEESHEIISKVPAGVSGTALAASLLRDGWSLTKIYE
KYQEAVDAMRHEQLGRKEAELILQRVLSELEEKAGFFQEERGEHERLVEAYSLVSQKLQD
SVSEQSYMEKIIMELKAELRRRERESILYQKDISDLQKQVTILLKECRDVQLRCGAARDE
EEDDTQLSDVEMDLESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESREMEL
KEKYEIDLKKKTDEASSKVAIVLERAEEQGKMIESLHASVAMYKRLYEEEQKLHSSNSHF
SVSPPAVVPGRKNFLHLLEDSQEATKRAQEKTFERIRSLEEDLAKARSEIIAIRSERDKL
SMEANFAREKLEGIMKESERKREEMNSVLARNIEFSQLIIDHQRKLRESSESLHAAEGIS
RKLSMEVSVLKQEKEVLSNAEKRASDEVCVLSQRVYRLQATLDTIQSTEEVREEARAVER
RKQEEHIKQLEKEWAEAKRELQEERSNARNSTSDRNQTLNNAVRQVEEMGKELANALKDV
SEAESRASVAEARLSDLEKKIRSSDPKVRDMDSGAVVSLSDNEISVGLHTAKDEMEKLRG
EVESSKSHMLQYKSIAQVNETALKQMESAHENFRIEAEKTHKSLEEELVSLRERVSELEN
DCIQKSEQIANAAAGKEDALVSASAEIASLREESLIKSSQIEAVNIQMSTLKNDLEKEHE
KWRVAQRNYERQVILQSETIQELTKTSQALASLQEEASELRKLADARGTEISELTSKWSE
EKYMLEQQKNLAEKKYHELNEQNKILHSRLEAMHLHSAEKDSRSGKISSESTGSDQLGDS
GLQTVVNYLRRTKEIAETEISLMKQEKLRLQSQLESAVKMADSARGSLNAERASTRATLL
TEDEIKSLQLQVNEMNLLRESNIQLREENKHNFEECQRLREVSQKARMDFENSENLLKQK
QTELDLCMKETERLRKEIDLQKRRVDELRETYKNIDVADYNRLKDEVRQFEEKLKGKDAH
IEEIKKLVLEKESKISLLEKDLTNCKNELREREKDLTKCKTEMSEREKRLDAAQQAQVAM
QSEIENLKAEISKLKGDSERFRKSFSNIKRKLDKEKDDLNRENQSLSKQLEEAKEAGKRT
TADATVEQAVKERDEKEQKIQILDKFHRSLKDDLKKKDDELTKEKTERKSVEKVFGDSLA
KIKQEKAKVDEELVKLERYQTALAQLSEELDKLKQADGNLPEGTSAVQALSGSVLNDQAA
AYVSAVDYFERMARTIVLNSQDSTKSTGTVTEASPATVEPSATVKASPSKAPVATTQQPT
KEKRLVSLKPSAELRRPVRRIKRPQFIKPEEPPQADVEMPEAEGAGDEGKQPSSHVLTES
QVATMAPPVQTHVRKRQADSLISEPHQGTQGETSSETAPPASKKPKGSESEPDTTETLSK
EPDVDESMDATTGAEDDNEETEAETAEEKTEETTEAQQESEAEEQEKADEPVEENPAETE
TIPTEEEFKEQTEQENQDLLGDVEFDKEEGELDLDTLDDLEEARDVATTPTQSPSRMETT
MEEPETTIEPPLEDVKNDEAAEEVSDKPNDDNNQQVAETDLKPETTIATTVSASTSSTPA
SASPSETPETEEAKRAASPSRTINIADKAKEKAALRQAGVATLGGTRTPSPGNRAPLSST
LRGRGRIANTRGGRLPTRGGRTPRGGGGGRGPPPSQP
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgtttatgccagacgatgatctcgcgcggctctcaaacgacgccgcgtcggtg
gttgtggttgcagagagagccgacgagtacatccgaaagctgtacgcagatttggacagt
gtacgtgccaaggccgatgctgcttccatcacggcggagcagacgtgctcgctcctcgag
cagaagtacctctcgctctctcgggatttcgcgtcgcttgaatctcataacgcgaagctt
cagtctgatctcgacgatcgattggctgagctcgcgcagtctcaggcgcagaagcaccag
cttcatttgcaatcgattgagaaggatggagagttggagagggtgacgacggagatgtcg
gagctgcataagtccaaaaggcaactgatggagttgctggagcagagagattctgagatt
agcgagaagaattcgaatatcaagagctatttggagaagattgttaagctgactgacgct
agctcggagaaggagtctagatttgctgaagcaggagctgaattagcacgatcgcaagct
atgtgctttcgtttgtctcaggagaaagagctcatggagagacatacgaaatggcttgat
gaggagttaacagctaaagttgatagctatgctgaactccgtaggaggcattctgatctc
gaggcggaaatgtcagcgaagcttgtggacgttgagaagaattataatgagtgctctagt
tcgttgaattggcataaggaaagattgagagagctcgaaacgaagattacttcattacaa
gaggaactcagctcgtgtaaagatgcagcaacgacgactgaagagcaatacagtgctgag
cttctcactgcaaacaagcttgttgagctgtacaaggaaagttcggaggaatggtctaga
aaggctggggaacttgagggtgtcattaaggccttagaggcacgcttgagccaagtcgag
agtgggtataaagatagacttgagaaagaaatgtctacgaaccagaagttggagaaggag
aacgaagacattaaacaaaaacttgagaagtatgaagcagaaattgagaaaactcggaaa
acagatgaactaacgcttgtacctttcagcagtttcacaagaggggttgacgtttctggg
accagcaacatgatagaggaaagccatgaaataatttccaaggttcctgctggtgtgtca
ggaacggcactggcagcatcactcctacgtgacggatggagtctgaccaaaatttatgag
aagtatcaagaggctgttgatgctatgagacatgagcagttaggtcgaaaggaagcggag
ttgatactacaacgggttttatccgaattagaagagaaagcggggttcttccaagaggaa
agaggcgagcatgagcgtttggttgaagcttactctctcgtcagtcaaaaacttcaggat
tctgtctctgaacaatcatatatggagaagatcatcatggagctaaaggctgaattgagg
aggcgggaacgtgaaagtattctatatcagaaagatatatctgacctacagaagcaggta
acgatactactgaaggagtgtcgtgatgtccaacttcgctgtggagctgctagggatgag
gaagaagatgatacccagctttctgatgtcgagatggatctggaatctgaagctgataaa
atcatttcagagcatcttttgaagtttaaagatataaatggactagttgagcagaatgtt
aagctcaggaatcttgttcgtagtctctcagagcagattgaaagtagggaaatggagctg
aaggagaagtatgagatagacctgaagaaaaagactgatgaagcttcttcaaaagtagcc
atcgtgctagaaagagctgaagaacagggtaaaatgattgaatcactgcacgcatctgtt
gcaatgtataaacgactatatgaagaggaacagaaactccattcatctaattctcatttt
tcagtttctcctccagctgtagtgccaggaaggaagaacttcttacatctgcttgaggat
tcacaggaagctactaagagagcccaagaaaaaacttttgaacgcattcgaagtctggaa
gaagatttagcgaaggctaggagtgagataattgcgattaggtctgagcgtgataagttg
tccatggaggcaaattttgctagggaaaaactagaaggcatcatgaaagaatctgaacgc
aagagggaagaaatgaacagtgttctggcaagaaacatagagttctcgcagctgatcatc
gaccaccaacggaagttacgtgagagttctgagtctctgcatgcagcggaagggatttct
agaaaattatctatggaggtatcggtgctaaaacaagaaaaagaggttttatcaaatgct
gagaaaagagcctctgacgaagtttgtgttttatctcagagagtttatcgtcttcaggct
accttggatactatccagagtacagaggaagttcgtgaggaagcaagagctgtcgagaga
aggaaacaagaggagcatatcaagcaacttgagaaagaatgggctgaagctaaaagagaa
ttgcaagaagaaaggagcaatgcgcggaatagcacttcggaccgcaatcaaactttgaac
aatgctgttaggcaggtcgaagaaatggggaaagaattggctaatgccttgaaggatgtc
tcggaagcagaatccagggcttctgtggctgaggctagactttctgatttggagaagaag
ataagatcttcagatcctaaggttcgtgatatggacagtggtgcagtcgtctctctttct
gataatgagatctccgtaggccttcatactgctaaagacgaaatggagaagttgagggga
gaagtagaatctagcaaaagccacatgcttcagtacaagagtatagctcaggtgaatgaa
acagctttaaagcagatggaatctgcccatgagaacttcagaattgaggctgaaaagaca
cataaatcgttggaagaagagcttgtttctcttagagaaagggtgtcagaacttgaaaac
gactgtatacaaaaatctgagcaaatagccaatgctgctgcaggaaaagaagatgctctt
gtatcagcatcagctgaaattgcaagtctgagagaagaaagcttaattaaaagttcccaa
atcgaagcagttaatatccaaatgtccactttgaaaaatgacctcgagaaagaacatgaa
aaatggcgtgttgctcagagaaattatgaaagacaggttattttgcagtctgaaaccatt
caagagctgacgaaaacatcacaggctttggcttcccttcaagaggaggcatctgaacta
cgtaaattggctgatgcaaggggaacggaaatttccgagcttacctccaagtggagtgaa
gagaaatatatgctagagcagcaaaagaatctagcggagaagaagtatcatgaactcaac
gaacagaacaaaatactgcatagccgacttgaggctatgcatcttcactcggctgagaaa
gatagccgttctggaaaaatatcatctgaaagcactggctcagatcaactcggagattct
ggtttgcaaactgtagttaattatttgcgcagaacaaaggaaatagcagaaacagagata
tcacttatgaaacaggaaaaattgcggttgcaatcgcaacttgagagtgccgtgaagatg
gcagactctgcccggggttcacttaatgctgagcgtgccagtacaagagccacattattg
actgaggatgaaatcaaatctcttcagcttcaggttaatgagatgaacttgctccgcgaa
agcaacatacaactcagggaggaaaacaaacacaattttgaggagtgccagagattgcgt
gaagtatctcaaaaggctaggatggatttcgaaaactcagaaaatctattgaagcaaaag
cagaccgagttagacttgtgtatgaaagaaacggaaaggctaaggaaggagatagatctt
caaaaaaggagggttgatgagttgcgagagacgtataaaaacattgatgttgctgactac
aatcgcctcaaagatgaagtgcggcaattcgaggagaaactgaaagggaaagatgctcat
attgaggaaatcaagaagcttgtgttagagaaggagagtaagatatccctactagagaag
gatctaacaaactgcaaaaacgaactgagagagagggagaaggatctaacaaaatgcaaa
acagaaatgagtgagagggagaagaggttagacgctgcccagcaagcacaggtggctatg
cagtcagagatagagaatctgaaagcagagatctctaagttgaaaggagattctgaaagg
ttcagaaaatctttttctaacattaagaggaagctcgataaagaaaaggacgacttaaac
agagaaaaccagtcactctctaaacagttagaggaagccaaagaggctggaaagagaacg
acagctgatgctacggtggagcaggccgttaaggagagagatgaaaaagaacaaaagatc
cagatattggataagtttcatcgttcactgaaagatgaccttaagaagaaagatgacgaa
ttaactaaagagaaaacagaacgcaagtctgttgagaaagtattcggagactcattggcc
aaaattaaacaggagaaagcaaaagtagatgaagagcttgttaaactcgagaggtatcag
acggcattggctcaactctctgaagaattggacaaattgaagcaagctgatggaaatctt
cccgagggtacttcagctgttcaggctctctctggaagcgtattgaatgaccaagccgct
gcgtacgtgtcagctgtagactattttgaacgcatggctcgtactattgtcctcaattct
caagatagcacaaaatctactggtacggtgactgaagcttcccctgctacagttgagcct
tcagccactgtcaaagcctctccttcaaaagctccggtggcaactacccaacagccaacc
aaggagaagagattggtttcgctgaaaccaagcgccgagctccgcagaccggttaggagg
attaaacgtcctcaatttattaaaccagaggaacctcctcaagctgatgttgagatgcca
gaagctgagggagctggtgatgaaggaaaacagccttcctcccatgttttaacagagagc
caagtagccacaatggcaccacctgttcagacacatgtccgtaaacgccaggctgattca
ttgatttctgagccacatcaagggacccaaggggaaaccagttccgaaactgcaccacct
gcgtcgaagaagccaaaaggatccgagtccgaacctgatactaccgaaaccctctctaaa
gagccagacgtggatgaatccatggatgcgactactggcgccgaggatgacaatgaagaa
acagaagccgagactgcagaggagaaaactgaggaaacgacggaagcacaacaagaaagt
gaagctgaagagcaggagaaagctgatgaaccagtagaagagaatccagctgagacagaa
accatccctaccgaagaagagtttaaggagcagaccgaacaagagaatcaagatcttctg
ggagacgtggagtttgataaagaggaaggagagctcgatctagatactctggacgatctc
gaagaagccagggatgtagctactacacccacgcagtcacctagtaggatggagacaaca
atggaagaacctgaaacaaccattgaaccaccactagaagatgttaagaacgatgaagct
gctgaagaagtctctgataaacccaacgatgataacaatcaacaagtagcagaaaccgat
ctcaagccagagaccacaatcgctacaactgtctcagcatccacttcctctactccagct
tctgcaagtccgagcgaaacaccagaaactgaagaagcgaaaagagcagcttcgccaagt
agaactattaatatagctgataaagcaaaagagaaagcagctctaagacaagccggtgta
gccactcttggtggaacacgaactccttcaccgggcaaccgagctcctttatcatccacc
ctcagaggtcgtggtcgaattgcaaacactcgaggcggcagactgcctactcgtggtggc
cgaaccccacgtggtggtggtggtggacgtggcccacccccgagccagccgtga
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integrated database retrieval system
