Raphanus sativus (radish): 108817063
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Entry
108817063 CDS
T06014
Name
(RefSeq) COP1-interactive protein 1
Organism
rsz
Raphanus sativus (radish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crescentin
KIP1
ATG16
Birna_VP5
Fez1
AAA_13
HOOK
Mod_r
HMMR_N
Cnn_1N
APG6_N
Motif
Other DBs
NCBI-GeneID:
108817063
NCBI-ProteinID:
XP_018445162
UniProt:
A0A6J0KB12
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All DBs
Position
7:complement(19256331..19263213)
Genome browser
AA seq
1591 aa
AA seq
DB search
MRKHLFRETLKSFFEPHFDHEKGEMLKGTKSEIDEKVKKILGMVESGDIDEDKSKRQEVS
ELVNEFYKEYQSLYHQYDDLTGVIRKKVHEKGENSSSSSSDSDSDHSSKKETKKNGKVET
DGLKQQIETANQETANLRNKLTASVEEKEAVDSELEAALVKLKESEEIISNLKLETEKLE
GEKTTALSDSRELRQKLEVAGITETDLNQKLEDMKKERDQLQTEIDIGIKRFQEAEKIAE
DWKTTSDQLKDEATDFKQQLEAAEQRVSDLTRGMSSAEEENKSLSLKVTELSGEIQQAQK
TIQELTSELGEVKEKYKEKESEHSSLVELHETHEKESSSQVRELEARVESSEKLIADLTQ
NLNNAEEEKKLLSQRISKAQNTIQELMSESEQLKQSHSVKEREIFGLKDIHETHQRESFT
RTSELEAQLESSDKRVSDLSASLKATEDENKAISSENAETLDKLEQAQKTIHELMAELGE
LKDRHKEKESELSSLVEIHEAHQRDSTSRVKELEALVGSAEQQVADMKQSLYNAEEEKKL
LSQKISDISTEITEAQNTIHELKSESGQLKESHGEKERELSGLRDIHETHQRESTTRVSE
LEAQLESSEQRVSEMSVSLEAAEEENKAISSKILETTDKLEQAQNTIEELIAELEEIKER
YKEKESQHSSLAELHETQLRESASHVKQLEAQVEASEKLVADLSQSLNNAEEEKKLLSQK
ISEISKEIQEAQNTIQELVSESEQLKESHSVKEREFSGLRDIHETHQRESSTRTSELEAQ
LKSSEQRVSELSASLNVSEEESKSMSSKILETSDELKQTQNKVQELMAELAESKSIHIQK
ESELSSLVEVHEAHKRDSSSRVKELEALVESAEQRVNDLNQSLNSAEEEKKMLSQRISEM
SNEIKQAENTIQELMSESGQLKESHSEKDKELFSLRDIHETHQRESSTQLRDLEAQLKSS
EQRVSDLSESLRIAEEENKTLSTKISDTSEELERVQVTLQELTVESSKLKEQLAEKEAEL
LHLTEKESKSQVQTKELEATVATLELELQSVRARTVDLETEIAGKTTEIEQLEAQNREMV
ARISELEKTMDERGTELSALTQKLEDNEKQSSSTIESLTAEIDGLRVALDSVSLQKEELE
KLMESKGDEASIQIKGLIDEINGLGQKVASLESQKAELEIQLERKSKESSEYMSQITNLK
EEIISKVKDNDNILEERNGLAEKIKGLEVEIETLRKQRSELDEELRTKTEEMVQMRDKIN
ESSAETVALTEQINNLQHELDSLQVKKSETEAELDREKQEKSELSNQITEVKRALVEQET
AYNMLGEEHKEINQLLKEREESLNKLAEDHKEAQKLLEETGNEVTSRDSAIAGHEETMES
LRNELEMKGEEIEALVEKISNIEVKLRLSNQKLRVTEQMLTEKEETFRREEAKHIEEQAL
LEKSLTVTHETYRGMIKAIAEKVNATLDGFQSVSEKITEKQGKYEKTVMEASKLLWTATN
WVIERNHEKEKIKKEMERKEEEIKKLGEKVREDEKEKETMKETLMGLGEEKREAIRQLCV
WIDHHRGRCEYLEEILSKTVVARGQRQSQRA
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcatctgtttagagagaccttgaagtctttctttgagcctcattttgatcat
gagaaaggtgaaatgcttaaaggaaccaaatctgaaatagatgaaaaggtgaagaaaatc
ttgggaatggttgagagtggagacatcgatgaagataaatctaaacgacaagaggtttcc
gagttagtgaatgaattctacaaggagtaccagtcactatatcaccagtacgatgatcta
acgggagtgattaggaagaaggtccacgagaaaggagaaaactcttcttcatcaagctca
gactcggattctgaccattcttcgaagaaggagaccaagaaaaatggaaaagtagagaca
gatggcttgaagcaacaaatcgaaactgcgaatcaggaaactgctaatctgagaaataag
ttgacagcgagcgttgaagaaaaagaagcagtagattctgagcttgaagcagctttggtg
aagttaaaagaatcagaagagatcatcagcaatctgaaacttgaaactgagaagttagag
ggcgaaaagacaacagctttgagtgatagccgagaactacgtcagaaactggaagttgct
ggcataacagaaactgatctgaaccagaagctagaagatatgaaaaaagaaagagatcaa
ctgcaaactgagatagacattggtatcaaaagatttcaagaagctgaaaaaattgcagaa
gactggaaaacaacgagtgaccaacttaaagatgaagctactgatttcaagcagcagcta
gaagcagcagaacagcgagtttctgatctgacccgcggaatgagtagtgcagaggaagag
aacaaatctctatccttgaaagttacagagctttccggtgagatccaacaggcacagaaa
accatacaagaactcacttccgaattgggagaggtgaaagaaaaatacaaggaaaaggag
agtgagcactctagtttggtggagttacatgagacccatgagaaagaatcatccagtcaa
gtcagagaattagaagcacgagtagaatcatcagagaagttgattgcagatttaacccaa
aacctgaataatgcagaggaagagaagaaactgctctcccagagaatctcaaaggcgcag
aacaccatacaagaactcatgtctgagtctgaacagctgaaacagagccacagtgtgaaa
gagagagaaattttcggtttgaaggacatccatgagactcatcagagagaatcattcacc
cgaaccagtgaattagaagctcaactggaatcctcagacaagcgggtctcagatttaagt
gcgagtctgaaggctacagaagacgaaaacaaagctatctcctcggaaaatgctgaaact
ctggacaagcttgaacaggcgcaaaagactatacatgaactcatggctgaactgggggag
ttgaaagaccgacacaaagagaaagagagcgagctttctagtttggtggagatacacgaa
gcgcatcagagagattcaacaagtcgagtgaaagagttagaagcgctggtgggatcagca
gagcaacaggttgcagatatgaagcagagtttgtacaatgcagaggaagagaaaaaactg
ctctctcagaaaatctcagatatttctaccgagattacagaggcacaaaacaccatacat
gaactcaagtctgagtctggacagttgaaagagagccacggtgagaaagagagggaactt
tctggtttaagggacatccatgagactcatcaaagagaatcaaccacccgagtaagtgaa
ttagaagctcaactagaatcatcggaacagcgtgtctcagagatgagtgtgagcctggag
gctgcagaggaggagaacaaagctatatcatcgaaaattttggaaactacagacaagctc
gaacaggcacagaacaccattgaagaactaatcgctgaattggaagagataaaagaaagg
tacaaggaaaaggagagtcagcattctagtttggcggagttacatgagacccagcttaga
gaatcagcgagtcatgtaaaacaattagaagcgcaagtggaagcatcagagaaattggtt
gcagatttgagccaaagcttgaacaatgcagaggaagagaaaaagctgttatctcagaaa
atatcagaaatctccaaagagattcaagaggcgcagaacaccatacaagaacttgtgtct
gagtctgaacagttgaaagagagccacagtgtgaaagaaagagaattctcgggtttaagg
gacatccatgaaactcaccagagagaatcatctactcgcacgagtgagttagaagctcaa
ctgaaatcatcagaacagcgggtctcagagttgagtgcgagtctgaatgtttcagaggaa
gaaagcaagtccatgtcctcgaagatcttggaaacttcagacgagctcaaacagacgcag
aacaaggtacaagaactaatggctgaattggcagagtcgaaaagtatacacatacaaaaa
gaaagtgagctttctagtttggtggaggtacacgaggcacataagagagattcatcaagt
cgagtgaaagaattagaagcactggtggaatcagcagagcaacgagttaacgatttgaac
cagagcctgaacagtgctgaggaggagaagaaaatgttatctcaacgaatttcagaaatg
tcgaatgagatcaagcaggcggagaacaccatacaagaactcatgtctgagtctggacag
ttaaaagagagccacagtgagaaagacaaggaacttttcagtttgagggatatccatgag
actcatcagagagaatcatccactcaactaagagatttagaagcgcaactgaagtcatct
gaacaaagggtttctgacctgagtgaaagtctgaggattgcagaggaagaaaacaaaacc
ctgtcgactaaaatctcagatacttcagaggagctcgaaagggtacaggtcacgttacag
gaactcacagttgagtcaagcaaactgaaagagcagcttgctgagaaagaagctgaactt
ttacatctgacagagaaggaaagcaaatcacaggtgcaaactaaagagctagaagcaaca
gtagcgacccttgagctggagctacagtcagttcgtgctcgtacagtagatcttgagaca
gagattgcaggcaagaccactgaaattgagcaactggaagcgcaaaacagagaaatggtt
gctagaatctcggaacttgagaagacaatggacgagagaggaactgaactctctgcttta
acccaaaaacttgaggataacgagaagcaatcatcgtccacaatcgagagtttgacagct
gagatcgatggcctaagagtagcactagattcagtgtctcttcaaaaagaagagttagag
aaactaatggagagcaaaggcgatgaagcttcaattcagattaagggtttgatcgatgag
atcaatggtctgggccagaaagtagcgtcacttgaaagccagaaagcagaacttgagatt
caacttgaaaggaagtccaaggagagctctgaatatatgagtcagattacaaatctaaaa
gaggagatcataagcaaggtcaaagataacgataatattctagaagagagaaatggttta
gctgagaagatcaagggtcttgaagttgagatagagactctacggaaacagagaagtgag
cttgatgaggagctaagaactaaaacagaagagatggttcaaatgcgcgataagattaac
gaatcatcggctgaaacagtggccttaacggaacagataaacaatctgcagcacgaactt
gattcactgcaggtgaagaagagtgaaaccgaagcagagcttgatagagagaagcaagag
aaatcagaattgtctaatcagatcactgaagtcaaaagagcattggtagagcaagaaact
gcttacaatatgctgggagaggaacacaaagagatcaaccaactgttaaaagaacgggag
gagtcacttaataagctagcagaagatcacaaagaagcccaaaaattgttggaggagaca
ggcaatgaagtaacatccagagattctgcaatcgcaggtcatgaagaaacgatggagagt
ttacgtaacgagctggaaatgaaaggagaagagatagaagctctcgtggagaaaatcagt
aacatcgaggttaagcttcgtttatcgaaccagaaactgagggtaaccgaacagatgtta
acagagaaagaggaaactttcagaagagaagaagctaagcacatagaggaacaagcattg
cttgagaaaagcctcacggtgactcatgagacatatcgaggtatgataaaagcgatagct
gagaaagtgaacgcaacacttgatgggtttcaatcagtgtcggaaaaaatcacggagaag
caaggaaagtacgagaagacggtaatggaggcatctaaattactgtggactgctacaaat
tgggtgatagagaggaatcacgagaaggagaagataaagaaagagatggagaggaaagaa
gaggagataaagaagcttggagaaaaggtacgagaagatgaaaaggagaaggagacgatg
aaggagactttgatgggacttggagaagagaaaagagaagctataaggcaattatgtgtg
tggatagaccaccatagaggtcgctgtgaatatcttgaagagattttgtctaagactgtt
gtggctcgaggacaaagacagtcgcagcgagcctaa
DBGET
integrated database retrieval system
