Raphanus sativus (radish): 108822319
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Entry
108822319 CDS
T06014
Name
(RefSeq) homeobox-DDT domain protein RLT1
Organism
rsz
Raphanus sativus (radish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WSD
DDT
Homeodomain
HARE-HTH
WHIM1
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108822319
NCBI-ProteinID:
XP_018450870
UniProt:
A0A6J0KSG1
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All DBs
Position
8:5700742..5707652
Genome browser
AA seq
1572 aa
AA seq
DB search
MEMGSDEEDQIKNGSENKKKKIDTLNNNKKRQMKTPFQLQTLEKVYSEETYPSEATRAEL
SVKLDLSDRQLQMWFCHRRLKDKKDGQAKKPAAPPPPAAAALSSLNELPAAGDRSGLGSG
SGSGCSPYSEPRRNFAGGSSSSRDEVDEYEQPRLSAMVRRAVACIEGQLGEPLREDGPVL
GMEFDPLPPGAFGTPIGMEEHQGHPYESKMYEPHDVRPRRPVARSFHAQQSLDDPSSYTP
EMYGRYSESQARGNGRSYGIHGNASLNCSTSQQDMPSPIVPSAHGDSFLMERKINDGRVG
RGSGQKDPEKVEVQRKKYEERMRKEMERHERERRKEEERLMRERIKEEEKLQREHRREVE
RREKFLQRENERAEKQKQKDEIRRERDAIRRKIAIEKATARRIARESMDLIEDEQLELMD
LAATSKGLPSVLQLDHDTLQNLELYRDSLSTFPPKALQLKMPFTISPWKDSEENVGNLLM
VWRFLISFSDVLDLWPFTLDEFIQAFHDYDSRLLGEIHITLLRSIIRDIEHVARTPYSGI
GNNQYTTANPEGGHPHIVEGAYAWGFDISSWKKHLNPLTWPEILRQLALSSGFGPKLKKK
SSHVTQTAHKDETKGCEDIISTIRSGSAAETAFASMLEKGLMAPRKSRHRLTPGTVKFAA
LHVLSLEGSKGLTLLELADKIQKSGLRDLSTSKTPEASISVALTRDAKLFERIAPCTYCV
RAPYVKDPADGEAILAEARKKIRAFENGLTGPEDLNDLERDEDFECDVDEEPEVDDLVTL
ASASNGNDLGVANGLSGKGGDDMSCDVKADVNNEAEKEFSPPPSSIKSIVPQYHSKDSAV
SCVDDTNAVVEDSNQGQSWIQGLTEGDYCHLSVEERLEALVALVSIVNEGNSLRASLEDR
MEAANSLKKQMWAEAQLDNSCMRDVLKLGFQNLSSNKTESTMEVVSNDLHKSPAERASIN
QEANTSQENCSLKRSRSQLKSYIGDKAEEVYPYRSLPLGQDRRHNRYWHFAASASRSDPC
SGLIFVELHDGKWRLIDSEEAFDTLVASLDMRGIRESHLRIMLQKIEGSFKENACKEKSV
VNHSPVDSVSPSSAISGSNSDSMETSTSIRVELGRNDREKGSLSKRFHDFQRWMWTETYS
SLPSCARKHGKKRRELLATCEVCVASYPSEYTHCTSCRRKLNMVDDSSERKILGSGLTAS
PLPFGVRLLKALLVFLEASVPDEALESFWTEDKRKNWGFRLNASSSPEELLQVLTSLESA
IKKEYLSSNFASAKELLGATDDSGSVEVVPWIPKTVSAVALRLLDLDASVMYVKPEKPEL
IPEDDKEEQISLFPGKSLIKGKGHREQEDQDEVVPNSGKKSKKRRVRFGSVSNRKVKRTK
LQGGPNRFVAGRSNVEVDRNLGSVELNHHQVPGRGKRTVRKRPERNDEDSYRLASRMADI
VRPNSEEVEEEEEEQTFRDINEDWASETPKRVMTPMQVDDESDNSVGVESEDDDDEGQFV
VYDQRNKWGLDWNSNPNEAMEDDEEGVGVERVEREDVAEMSESSEDDDDAPANNVATNNY
DSESEDYSSSDS
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atggagatgggttctgatgaagaagatcagatcaagaatggtagcgagaataagaagaaa
aagattgatactttgaataacaacaagaagcgtcagatgaaaactccctttcaactccaa
actctggagaaagtttattcagaggaaacgtatccgtcggaggcgacgagggctgagttg
tctgtgaaattggatttgtccgatagacagttacagatgtggttttgtcataggaggtta
aaggacaagaaggatggccaggccaagaaaccggctgctcctcctcctcctgctgctgct
gctttgtcgtcgcttaacgagttaccggctgctggtgatagatctggtttgggttctggc
tcaggctcaggctgcagcccttattctgagcctaggaggaatttcgcgggcggtagcagt
agctctcgagatgaggtggatgaatacgagcagccacggctgtctgccatggttcgtaga
gctgttgcctgcattgagggtcagttaggggagccactgagagaggatggaccggttctt
ggcatggagtttgatccgttgcctcctggtgcatttggaacacccataggaatggaggag
caccaaggtcatccatatgagagcaaaatgtatgagccacatgatgtccgacctcgaaga
cctgttgctcgttctttccatgctcaacaatcactggatgatccgtcttcctacacacct
gagatgtatgggcggtactctgagagtcaagcacgtggtaatgggcggtcctatggtatc
catggaaatgcatctttgaattgttctacatctcaacaagacatgcctagccccattgtc
ccatcagctcatggtgatagcttcctgatggagagaaagattaacgatggtagagtcgga
agagggagtggacagaaagatcctgagaaagtagaagttcagaggaaaaagtatgaagaa
cgcatgagaaaggagatggaaagacatgaacgtgagaggcgtaaagaagaagagaggctg
atgcgtgaaagaataaaagaagaggagaagttacagcgtgaacatagacgtgaagtggaa
agaagagaaaagtttctacagagagaaaatgaacgtgcggagaaacagaagcaaaaagat
gagattcgacgggagagagatgctataagacgcaagattgccattgagaaggcaactgca
cgtagaattgctagagagtctatggatctaatcgaagacgagcagctagagctgatggat
ttggctgctactagcaaaggattaccctcggtattgcagcttgatcatgatacgttgcaa
aaccttgaactgtatagagattctttgagcacatttccaccaaaggctttgcaactaaaa
atgccgtttaccatctctccatggaaggattctgaggaaaatgttggaaaccttctaatg
gtttggagattcctaatatcattttctgatgttctagacctatggccttttaccctggat
gagtttattcaggctttccatgactatgactcaagattgctgggggagatacatattact
cttctgagatcaataatacgagacattgaacatgttgctagaacaccttatagtggaatc
ggaaataaccaatataccacagccaatcctgagggtggtcatccgcatattgttgaaggg
gcttatgcatggggctttgacattagtagttggaaaaagcatttgaacccactaacatgg
cctgagattctccgccagttggcactctctagtggatttggacctaagcttaagaagaaa
agttcccatgtgacacaaactgctcacaaggatgagactaaaggttgtgaagatattatt
tctactattcgaagtggttcagcagctgaaactgcttttgcatcaatgctggagaaaggg
ttgatggctccgcgcaagtcgaggcatcgtttgacacctggaactgtcaaatttgcagcc
ttgcatgttctctctcttgagggaagcaagggactaacactattagaacttgccgacaag
attcagaaatctggacttcgggatttgtcgacaagcaagacgccagaggcttctatctcc
gttgcattgacgagagatgcgaagcttttcgaaagaatagcgccttgtacttattgtgta
cgagcgccttatgtgaaggaccctgcggatggagaggcaatactcgcagaggctaggaag
aagataagggcattcgaaaatggattgacaggtccggaagatttgaatgatcttgaaaga
gatgaagactttgaatgtgatgttgatgaggaacctgaggttgatgatttagtcactctg
gctagtgcctcaaatggtaatgatctcggtgtagcaaatggtttgtctggaaagggagga
gatgatatgtcctgtgatgttaaagcagacgttaataatgaggctgagaaggaattttct
cctcctccaagcagtattaagagcattgttccacaataccatagtaaagattcagcggtt
agctgcgtggatgataccaatgctgttgttgaagatagcaaccagggacaatcatggatt
caaggtcttacagaaggggattattgtcatctaagtgttgaagagcgccttgaggccctt
gttgctttagtcagcattgtcaatgaaggaaattccctcagagctagtcttgaggatcgt
atggaagcagcaaattctcttaaaaagcaaatgtgggcagaagcacagttagataacagc
tgcatgagggatgtacttaagcttggttttcaaaacttatcaagcaataaaaccgaatca
actatggaagttgtttcgaatgatctacataagtcacctgctgagagagcctctatcaac
caagaggccaatacaagtcaagagaactgttctttaaagagatcacgctcacagttaaaa
tcatatataggcgacaaagcagaagaagtgtatccctaccgatctttgccgcttggacag
gaccggcgccacaaccgttactggcattttgctgcatcagcatctagaagtgatccttgc
tcggggcttatatttgttgagctccatgatggcaaatggcgcctcattgattcagaagag
gcttttgacactctggttgcatcactggatatgcgtgggatcagagaatctcatttacgc
ataatgctgcagaagattgagggatcgttcaaagagaatgcttgtaaggaaaagagcgtt
gtgaatcattctcctgtggattccgtgagcccatccagtgctatatcagggtctaattct
gattcaatggaaacttcaacttctatcagagttgagctagggagaaacgacagggagaag
gggagtttatcaaaacggttccatgattttcagagatggatgtggaccgagacgtacagc
tcgctgccttcttgtgctaggaaacacgggaagaagagacgtgaactgttggcaacatgc
gaagtgtgtgttgcatcttatccatctgagtatacacactgcacttcttgtcgccggaaa
ttgaacatggttgatgatagttcagagaggaagatattaggttcaggtttgactgcatct
cctcttccttttggagtcaggttgctgaaagcactacttgtttttcttgaggcatctgta
ccagatgaagctcttgaatcattttggacagaggacaaaagaaaaaattgggggtttagg
ttgaatgcttcatcatcacctgaagagcttctgcaggtgttgacttccttagagagtgca
atcaagaaagagtatttgtcatctaattttgcgtcggcaaaggagctcttgggagctact
gatgattcaggatcagtagaagttgttccatggataccaaagacagtatcagcggttgct
ttgagacttttagaccttgatgcatccgttatgtacgtgaagccagagaaacctgagcta
atcccagaagatgacaaggaggagcagattagcttgtttcctggaaagtctcttatcaaa
ggcaaaggacacagagagcaagaagaccaagacgaggttgttccaaactcgggtaaaaaa
agtaagaaacgaagagtaagatttggttctgtatcaaacagaaaggtgaagaggacgaaa
ttgcaaggtggtccaaacagatttgtcgctggtaggagcaatgttgaagtggataggaac
ttaggaagcgtcgagttgaaccatcatcaagtccctggaaggggaaagaggacggttaga
aaaagaccagagaggaacgacgaggacagttaccgcttagccagcagaatggctgacatt
gttaggcctaatagcgaagaagttgaagaggaggaggaagagcaaacattcagagacatt
aatgaagactgggctagtgaaacacctaagagagtgatgacgcctatgcaggtggatgat
gaaagtgacaacagtgtaggagttgagtcagaagatgatgatgatgagggtcagtttgtg
gtttacgatcagagaaacaagtggggactagattggaatagtaacccgaatgaagcaatg
gaggatgatgaagaaggtgttggggttgagcgggttgaaagagaagatgttgcagaaatg
agtgagagctctgaagacgatgatgatgcacctgctaataatgtagcaacaaataattac
gacagtgaatcagaggattacagcagcagcgattcgtga
DBGET
integrated database retrieval system
