KEGG   Raphanus sativus (radish): 108830293
Entry
108830293         CDS       T06014                                 
Name
(RefSeq) nuclear-pore anchor
  KO
K09291  nucleoprotein TPR
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108830293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108830293
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108830293
SSDB
Motif
Pfam: TPR_MLP1_2
Other DBs
NCBI-GeneID: 108830293
NCBI-ProteinID: XP_056851109
UniProt: A0A9W3CHW2
LinkDB
Position
9:950170..962844
AA seq 2107 aa
MPLFMPDDELARLSSSDAASVVVAERADEYIRKLYAELDSVRAKADAASITAEQTCSLLE
QKYLSLSHDFASLESQNAKLQSDLDGRLAELAQSQAEKHQLHLQSIEKDGELERMTTEMS
ELHKSKRQLMELLEQKDSEISEKNSNIKSYLDKIVKLTDASSEKESRYAEAGAELARSQA
MCSRLSQEKELMERHTKWLDEELTAKVDSYAELRRRHSDLEAEMSAKLVDVEKNYNECSS
SLNWHKERLRELEAKVTSLQEELSSCRVAAAATEEQYNAELSTANKLVELYKESSEEWSR
KAGELEGVVKALEARLNQVESGYKDSLEKEMSTNQQLEKENQDLKQKHEKLEAEIEKTRK
TNELTLLPFSSFTRGADDSGTSNMIEESHAIISKVPAGVSGTALAASLLRDGWSLAKIYE
KYQEAVDAMRHEQLGRKEAELILQRVLSELEEKAEFIQDERGEHERLVEAYSLVNQKLQD
SVSEQSNMEKYIMELKADLRRRERENILSQKDISDLQKQVTILLKECRDVQLRCGAARDD
EEDDTQLSDVEMDMESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESREMEL
KEMFETELKKKTDEASSKVAIVLKRAEEQGQMIEALHTSVAMYKRLYEEEQKRYSSNSRS
SDLPPVPGRNNFLHLLEDSQEATKRAQEKTFERIRNLEEDLAKARSEIIAIRSERDKLAM
EANFVREKLEGIMKESERKREEMNGVLARNIEFSQLIIDHQRKLRESSESLHAAEEISRK
LSMEVSVLKQEKEVLSSAEKRASDEVSALSQRVYRLQATLDTIQSTEEVREEARAAERRK
QEEHIKQLEKEWAEAKKELQEERSNSRNSTSDRNQTLNNAVMQVEEMGKELANALKAVTA
AESRASVAEARLSDLEKKIRSSDPKGLDMDSGGVVSLSDNEMSVELRTAKEEMEKLRGDV
ESSKSHMLQYKSIAQVNETALRQMESAHENFRLEAEKRQETLEAELVSLRERVSELENDC
LQKSEQIANAAAGKEDALVSASAEIASLREESLVKSSQIEAMNIQMSTLKDDLEKEHEKW
RVAQTNYERQVILQSETIQELTKTSQALASLQEEASELRKLADSRGTEISELNSKWSEEK
CMLEQQKNQAEKMYHELNEQNKLLHSRLEAMHLRSAEKDSRSGNLSSGSTDSDQLGDSGL
QSVVNYLRKTKEIAETEISLMRQEKLRLQSQLESALKMAESARGSLNAERASTRASLLSE
DEIKSLQLQVSEVNLLRESNMQLREENKHNFEECQRLREVAQKAKTDSENFENLLKQKQT
ELDLCIREMERLRKDSDLEKKRVDELRETYKNIDVADYNRLKDEVRQLEDKLKAKDDHIE
VFKKLLLEKQNKIALLEKDLANCKNELSEREKDLTKCKAEVSEREKKLDAAQQAEATMQS
ETEKLKADITRIRKSYTFMKKKLEKERDDLNSDNQSLSKQLGEAKEAGKRTATDATVEQA
VKERDEKEQKIQILDKYLHSLKDDLKKKDDELTKEKTERKSVEKILGDSLAKIKEEKTKV
DEELVKLERYQTALANLSEELDKLKQADGNLPEGTSAVQVLSGSVLNDQAAAYVSAVESF
ERMARTFVLNSQGNTSSTDMVTEASPAIVESSAIARASSSKAPVATTQQPPKVKRLTLQK
PNTELRRGRIIRPQLGKLEEPPQVDAEMPEAEVAGGEGKQPSSNVTESQGTTVVPPVQTQ
VRKRQADSLTSEPPQATQGEASTEIVPPASKKSKGSENEPDTAEGENLSKEPDVDETMDA
TLAAEDDNEETEAETADEETVEAQQENEPEEGQDKIDDEPVEENPTQTEEELKDQTEQEN
QDLPTDAEFDKEEGELDLDTLEDLEETTDVATTPMQSPIRMETTMEEAETTIEPPLDDVK
DDEGGDVAAEEASDKPNDGKNQQVAEADLKPESTVVTTASASASATPPTSSTPASASPVE
TPETEETKRNRSQVAETKVATTVSASTTPASAGASETPETEETKRAASPSRTINIADKAK
EKAAIRQAGVAATLGGTRTPSPANRAPSPPAPRGRGRIVNTRGGNRVLLTRGGRTQRGGR
GPPPSQP
NT seq 6324 nt   +upstreamnt  +downstreamnt
atgcccttgtttatgcccgacgacgagctcgcgcggctctctagcagcgacgccgcctcg
gtggtggtcgccgagagagccgacgagtacatccgcaagctctacgccgagcttgacagc
gtccgcgccaaggctgatgctgcttccatcaccgcggagcagacgtgctcgcttctcgag
cagaagtacctctcgctctctcacgatttcgcgtcgctcgaatctcagaacgcgaagctt
cagtctgatctcgatggtagattggctgagctcgcgcagtctcaggcggagaagcaccag
cttcatttgcaatcgattgagaaggatggagagttagagaggatgactacggagatgtct
gagctacacaagtccaagaggcagctgatggagttgctagagcagaaagattccgagatt
agcgagaagaattcgaatatcaaaagctatttggataaaattgttaagttgactgacgct
agttcggagaaggagtccagatatgctgaagcaggcgcagagttggcgcgttcacaagct
atgtgcagtcgtttatctcaggagaaagagctcatggagaggcatactaaatggcttgat
gaggagttaacagccaaagttgatagttatgctgaactccgtaggaggcattctgatctc
gaggctgaaatgtcagcgaagcttgtggatgttgagaaaaattacaatgagtgctctagt
tcgttaaattggcataaggaaagactgagagagctggaagctaaggttacttcattacaa
gaggagctcagctcgtgcagagttgcagcagcggccactgaagagcaatacaatgctgaa
ctttctactgcgaacaagcttgttgagctgtacaaggaaagttcggaggaatggtccaga
aaggcgggcgaacttgaaggtgtcgttaaggccttagaggcacgcttgaaccaagtcgag
agtgggtacaaagatagtcttgagaaagaaatgtctacaaaccagcagctagagaaggag
aaccaagaccttaaacaaaaacatgagaagcttgaagcagagattgagaaaactaggaaa
acaaatgagctaacgcttttacctttcagcagtttcacaagaggggcagacgattcaggg
accagcaacatgatagaggaaagccatgcaataatttccaaggttcctgctggtgtgtca
ggaacggcactggcagcttcactcttacgtgatgggtggagtttggccaaaatttatgag
aagtatcaagaggctgttgatgcaatgagacatgagcaattaggtcgaaaggaagctgag
ttgatactacaacgggttttatccgaattagaagagaaagctgaatttatccaagatgaa
agaggtgagcatgagcgtttggttgaagcttattcactagtcaatcaaaaacttcaggat
tctgtatctgagcaatcaaatatggagaagtacatcatggagctaaaggctgacttgagg
agacgggaacgtgaaaatattctatctcagaaagatatatctgacttacagaagcaggta
acgatactactgaaggagtgccgtgatgtccaactccgctgtggagctgccagggatgat
gaagaagatgatactcagctttctgatgttgagatggatatggaatctgaagctgataaa
attatttcagagcatcttttgaagtttaaagatataaatggactagttgagcagaatgtt
aagctccgaaaccttgttcgtagtctctcagagcagattgaaagtagggaaatggagctc
aaggaaatgtttgagacagaactaaagaaaaagactgatgaagcttcttccaaagtagcc
atcgtgctcaaaagagctgaagagcagggtcaaatgattgaagcacttcacacatctgtt
gcaatgtataaacgactatatgaagaggaacaaaaacgttattcatctaattctcgttct
tcagatttgcctccagtgccaggaaggaataactttttacacctgcttgaggattcacag
gaagctacgaaaagagcccaagaaaaaacttttgaacgcatccgaaatctggaagaagat
ttagcgaaggctaggagtgagataatagcgataaggtctgaacgggataagttggccatg
gaggcaaattttgttagggaaaaactagaaggcatcatgaaagaatctgaacgcaagaga
gaagaaatgaacggtgttttggcaagaaacatagagttctcgcagctgatcatcgaccac
caaaggaagttacgtgagagttctgagtctctgcatgcagcggaagagatttctcgaaaa
ttatcaatggaggtttcggttctaaaacaagaaaaagaggtgttatccagtgctgaaaaa
cgagcttctgatgaagtttctgctctatctcagagagtttatcgtcttcaggctaccttg
gatactatacagagtacagaggaagttcgtgaggaagcaagagctgccgagagaaggaaa
caagaggagcatatcaagcaacttgagaaagaatgggctgaagctaaaaaagaattgcaa
gaagaaaggagcaattcgcgaaatagcacttcggaccgcaatcaaactttgaacaatgct
gttatgcaggtcgaagaaatgggaaaagaattggctaatgccttgaaggctgtcacggca
gcagagtcaagggcttctgtggctgaggctagactttctgatttggagaagaagataagg
tcttcagatcctaagggccttgatatggacagtggtggggtcgtctctctttctgataat
gagatgtccgtagaactgcgtactgcaaaggaagaaatggaaaagctgaggggagatgta
gaatctagcaaaagccacatgcttcagtacaagagtatagcacaggtgaacgaaactgcg
ttgaggcaaatggaatctgcccatgagaacttcagacttgaggctgaaaagagacaggaa
acattggaagcagagcttgtttctcttagggaaagggtgtcagaacttgaaaacgactgt
ctacaaaaatctgagcagatagccaatgctgctgcaggaaaagaagatgctcttgtatca
gcatcagctgaaattgcaagcctgagagaagaaagcttagttaaaagttcccaaatcgaa
gcaatgaatatccaaatgtccactttgaaggatgacttggagaaggaacatgagaaatgg
cgtgttgctcagacaaattatgaaagacaggttattctacagtctgaaactattcaagag
ctgacgaaaacttcgcaggctttggcttcccttcaagaggaggcatctgaactacgtaaa
ttggctgattcgaggggaacggaaatttccgagcttaactccaagtggagtgaagagaaa
tgtatgctagagcagcaaaagaatcaagcggagaagatgtatcatgaacttaatgaacag
aacaaattactccatagccgacttgaggctatgcatcttcgctcggctgagaaagatagc
cgttctggaaacctatcatctggaagcactgactcggatcaacttggagattctggttta
caaagtgtagttaattatttgcgcaaaacaaaggaaatagctgaaacagaaatatcactt
atgagacaggaaaaattacggttgcaatcgcaacttgagagtgccttgaagatggcggaa
tctgcccggggttcacttaatgctgagcgtgccagtacaagggcctcattattgagtgaa
gatgaaatcaaatctcttcagctccaggttagtgaggtgaacttgctccgtgaaagcaac
atgcaactcagagaagaaaacaaacacaattttgaggagtgccagagattgcgtgaggta
gctcaaaaggctaagacggattccgaaaactttgaaaatctattgaagcaaaagcaaacc
gagttagacttgtgtataagagagatggaaaggctaaggaaggactcagatcttgaaaag
aagagggttgatgagttgagggagacgtataaaaacattgatgttgctgactacaatcgc
ctcaaagatgaagtgcggcaactcgaggataagctgaaagcgaaagatgaccatattgaa
gttttcaagaagcttctgttagagaagcagaataagatagcgctactagagaaggatcta
gcaaactgtaaaaacgaactgagcgagagggagaaggatctaacaaaatgcaaagcagaa
gtgagtgagagggagaagaaattagacgctgctcagcaagcagaggcgactatgcagtca
gagactgagaagctgaaagcagatatcacaaggattaggaaatcttacaccttcatgaag
aaaaagctcgaaaaagaaagggacgatttgaacagtgataatcagtcactctctaaacag
ttaggggaagccaaagaggctggaaagagaacagcaactgatgctacggtggagcaggcc
gtcaaggagagagatgaaaaggaacaaaaaattcagatattggataagtatcttcattca
ctgaaagatgacctgaagaagaaggatgacgaattaacaaaagagaaaacagaacgcaag
tctgttgagaagatacttggagactccttggccaaaattaaagaggagaaaacaaaagtg
gatgaagagcttgttaagctcgagaggtatcagacggcattggctaatctctctgaagaa
ttggacaaattgaagcaagcagatggaaatcttccagagggtacttcggctgtccaggtt
ctctctggaagcgtattgaatgaccaagccgctgcctacgtatcagctgttgagtctttt
gaacgcatggctcgtacttttgtcctcaattctcaaggcaacaccagttctaccgatatg
gttactgaagcttcccctgctatagttgagtcttcagccattgccagagcttcttcgtca
aaagcaccggtggcaactacccagcagccacccaaagtgaagagattgactttgcagaaa
ccaaacactgaactccgcagagggaggattattcgtccccagcttggcaaactagaggaa
cctccgcaagttgatgctgagatgccagaagctgaagtagctggtggtgaaggaaaacag
ccttcctccaatgtcacagagagtcaaggaaccaccgttgtaccgcctgttcagacacaa
gtccgtaaacgccaagctgattcgttgacttctgagccaccgcaagcgactcaaggggaa
gctagtaccgagattgtaccacctgcgtctaagaagtcgaaaggatctgagaatgaacct
gatactgccgaaggtgaaaacctctccaaagagccagacgtggatgaaaccatggatgct
acccttgccgccgaagatgataatgaagaaacagaagctgagactgcagatgaggaaact
gtggaagcacaacaagaaaatgaacctgaagaagggcaggataaaattgatgacgaaccg
gtagaagaaaatccaacccagaccgaagaagagttgaaggatcagaccgaacaagagaat
caagatcttccgacagacgcggagtttgataaagaagaaggagagctcgatctagataca
ctggaagatctcgaagagactactgatgtagcgactacacccatgcagtcacctattagg
atggagacaactatggaggaagctgaaacaaccattgagccaccactagatgatgttaag
gacgatgaaggaggtgatgtagctgctgaagaagcctctgataagcccaacgatggtaag
aatcaacaagtagcagaagccgatctcaagcccgagagcacagtagttacaactgcatct
gcatctgcatctgccactccacccacttcctctactccagcatctgcaagtccggtcgaa
actccagaaactgaagaaacgaaaagaaaccgatctcaagtagcagagaccaaagtagct
acaactgtctctgcatctaccactccagcatctgcaggtgcgagcgaaactccagaaact
gaagaaacgaaaagagcagcgtcgccaagtaggactattaatatagctgataaagcaaag
gagaaagcagctataagacaagccggagtagctgctactctaggagggacccgaactcct
tcaccagccaaccgtgctccttcaccacccgctcctagaggtcgtggtcgaattgtgaac
actcgaggaggcaatcgagtgctacttactcgtggtggccgaacccaacgtggtggacgt
ggaccaccgccgagccagccgtga

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