Raphanus sativus (radish): 108832689
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Entry
108832689 CDS
T06014
Name
(RefSeq) helicase-like transcription factor CHR27
Organism
rsz
Raphanus sativus (radish)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-rbx1
Cmr2_hel_dom1
Prok-RING_4
zf-RING_13
Motif
Other DBs
NCBI-GeneID:
108832689
NCBI-ProteinID:
XP_056842093
UniProt:
A0A9W3BS93
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Position
5:complement(35700605..35705550)
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AA seq
1054 aa
AA seq
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MDSAIEISSGSSSSSGSSGSDDEVSEPTRTRRNTAWLYGSRSFPQRGSSEVHTQASSSGA
PYQPRDSRASNVSGVDNEKLPSQQALKRTLPPSFNPPPAPSRSANSVSHGNKADDVSPAV
GNKNTTQASRSGAPPSYLPRDSSTFTRNDENVASSSVSGVNDKKLPAQQALKRTLPPSFN
PSRNGADYSSPAASALGNKNTFGEGYYRGAHAEIGIQRGVNGVRILPPSMTHGASASPLH
YGGQSDPIHRVVGIVEDRNSENDERLIYQAALRDLNQSNNEMDLIPGTLSVSLMRHQKIA
LAWMFQKETSSLHCSGGILADDQGLGKTVSTIALILKQKFESQIKSEISSKQEAEILDLD
ADDESEAPKHESESDVKPEVKVSSNSETTVKSAGDNDGNGSSVKGKAKVEGASTLKREFN
RKRPAAGTLIVCPASIVRQWATELDEKVSYESKLSVLIYHGGCRTKDPVELARYDVVVTT
YAIVTNEVPKESLVEDDEDDEKDNKGLAPGFSNYKKRKDAAGTSKKSKKRGRKGMDDSSF
DSDCGALSKVGWLRVVLDEAQTIKNHRTQVARACCTLRAKRRWCLSGTPIQNTIDDLYSY
FRFLRYNPYAVYKSFYHTIKVPISRNSLNGYKKLQAVLRAIMLRRTKETLLDGQPIINLP
PKKINLKRVDFSVEERSFYKKLEAESQSQFKAYQAAGTLSQNYANILLMLLRLRQACDHP
QLVKGYNSDPVGKESREAVKRLPREARINLLKRLESSSAICNICNDPPENPVISLCGHVF
CYQCVSEHINGDENVCPVRRCREDFGRDVVFSKSALRNSTTNDSGSSSSQNKSFSQKSEF
SSSKIQAVLDILQSLSKQGRRNSAQHGRNPSSSQPHEDDDDVTIVEPTTLHSSSPSQGPI
KTIVFSQWTGMLDLVEASFVENGIEFRRLDGTMSLAARDRAVKEFSKVPRVEVMLMSLKA
GNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVSVTRVTIKDTIEDKILSLQ
EDKRKMVASAFGEEHGGSSATRLTVDDLKHLFMA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggattctgctattgagattagttccggtagtagtagtagcagtggtagtagtggtagt
gatgacgaggtgtctgagcccactagaaccaggagaaataccgcgtggctctatggtagt
cgtagcttccctcaaaggggttcctctgaggttcatactcaagcttctagcagtggtgcc
ccatatcagccaagagactcgagagcttctaatgtttctggtgtggataatgagaagctg
ccttctcaacaagccttgaaaagaacccttccaccttcttttaatccgcctcctgctcct
tcaagaagtgctaacagtgtaagtcacggcaacaaggcggatgatgttagtccagctgta
ggtaacaagaatactactcaagcttctcgcagtggtgcaccaccgagttatctgccaaga
gactcttcaacatttacaaggaatgatgagaatgttgctagctctagtgtttccggtgtg
aatgataagaagctgcctgctcaacaagccttgaaaagaacccttccgccctcttttaat
ccatcaagaaacggggcggattatagtagtccagctgcgtcagctttaggcaacaagaat
acttttggcgagggttactaccgtggagctcatgctgagattggaattcagcgtggcgtg
aatggggttaggatcctgcctccatctatgacgcatggagcatctgcttctcctttgcat
tatggtggtcaaagtgatccaattcacagggttgttgggattgttgaggacaggaattct
gagaacgatgagcggctcatctatcaagctgcactacgggatttgaatcaatccaacaac
gagatggatctaattcctggtaccctttcagtttctctgatgaggcatcagaaaatcgca
ttggcatggatgtttcagaaggaaacaagtagtttgcactgttcaggagggatattagca
gatgatcagggacttggtaagacagtctcgacgattgctcttatcttgaagcaaaagttt
gagtcacaaataaagtctgaaatttcaagcaagcaagaggctgaaatcttggacctggat
gctgacgatgagtcagaagctccaaagcatgaaagtgaaagtgatgtgaaaccagaggtc
aaggtttcaagcaacagtgagaccacggttaagagtgctggtgataatgatgggaatggc
agttcagtgaaggggaaagccaaagttgaaggagcgagtactctgaaacgggaatttaac
agaaagaggccagctgctggtacattaattgtttgtccagcgagtattgtgaggcagtgg
gcaacagagcttgatgagaaggtttcttatgaatccaaactttctgttttgatctaccat
ggtggttgtaggaccaaagatcctgttgaattggcgagatatgatgtggttgtcacaact
tacgccattgtgaccaatgaagttcccaaagagtcattggtggaggatgatgaagatgat
gaaaaggataacaaaggtctcgcccctggcttctctaactacaagaaacgtaaagatgca
gcgggtacaagtaagaagagtaagaaaagaggtagaaaaggcatggatgattcttctttt
gactctgattgtggtgctctgtcaaaagttgggtggctcagagtagttctagatgaagct
cagacaatcaagaatcatagaactcaagtggcaagagcatgctgcactcttcgagccaaa
aggaggtggtgtttgtctggaacgccaatacaaaacaccattgatgatctgtatagttac
ttcaggttccttaggtataatccatatgccgtgtacaagtcattctaccatacaatcaag
gttccaatttccagaaattctcttaatggttacaagaagcttcaagctgttctaagggct
ataatgctgcgccgtaccaaagaaacattgcttgatgggcaaccaataatcaatctacct
ccaaagaaaattaatctgaaaagggtggacttttcggtggaggagcggtctttctacaag
aagcttgaagcagagtcacaatcacagttcaaggcatatcaagctgcagggactttgagc
caaaactacgccaatattcttctgatgcttttgcgtctacgccaagcttgtgaccaccca
caactcgtgaagggatataactcagatcctgttggaaaagaatcaagagaagcagttaaa
agactccctagggaggctcgaatcaatttgctcaaacgtttagagtcatcatctgccatc
tgcaatatctgtaatgatccaccagaaaaccctgttatttcgctctgtggccatgtattt
tgctatcagtgtgtttcagaacacatcaatggagatgagaacgtgtgccctgtaaggaga
tgcagagaagactttgggcgtgatgttgtgttctctaaatctgcccttagaaattctacc
actaatgattcaggctctagttcttcacagaacaaatcattttctcaaaaaagcgagttt
agttcgtcaaaaatccaagctgtcctggatattctgcagtcgctctccaaacaaggcaga
cgaaactcagcccagcatggtcgaaacccttcttcctcacagccacatgaagatgacgac
gatgtaaccattgtagagccaacgactcttcactcatcttcacctagccaggggccaata
aagacaatagtgttctctcagtggaccggtatgcttgacttggttgaggcgagttttgtt
gaaaatggtatagaattcagaagattagatggtacaatgagtcttgcagcaagagacagg
gctgtaaaagaattcagcaaagttccacgtgtagaggtgatgctgatgtcgctaaaagct
ggaaaccttgggttgaacatggtagctgcatgtcatgttatacttttggatctttggtgg
aatccaacaaccgaagaccaagctgttgaccgtgcacatcgtattggacaaactcggcct
gttagtgtaactcgtgtcactataaaagataccattgaggataaaattttgtctcttcag
gaagataaaaggaaaatggttgcatctgcgttcggtgaagaacatggtggaagctctgca
actcgactgacagtagatgatctcaaacatctttttatggcgtag
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