Raphanus sativus (radish): 108852072
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Entry
108852072 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108852072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108852072
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108852072
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108852072
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF1644
zf-C3HC4_2
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
108852072
NCBI-ProteinID:
XP_018481064
UniProt:
A0A6J0N964
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Position
1:22741501..22743041
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AA seq
291 aa
AA seq
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MAGVSISEASGQVNGSSSALSQKRQRSLVSPGGDGAKKRSLMLMDSDLLDCPICYEPLTV
PIFQCDNGHLACSSCCPKLSNHCPSCASPIGDKRCRAMENVLESTFVPCQNAELGCTKNV
SYGKESTHKRECNFSPCSCPVQDCNFIGTYKDLYVHYRITHSKNYLLDRFTCGVSFSTQL
NIKNETVILRENSKYLLFTMHCFRKPYGVIVTISCIAPSAPEVGEFSYHLSYTVDGHTLT
YESSKVKRVLEVSCQTGQENFMLIPHCLLRGDLLKMELCIRSRRSITEQEG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtttcaatttcagaagcttcaggccaagtaaatgggtcgagtagtgctctc
tcgcaaaagagacaacgctctttggtatctcccggtggcgacggagcgaagaaacgctcg
ctgatgctgatggactcagatcttctcgactgtcccatttgctatgaaccattgacagtt
cccatcttccagtgtgataatggacacttggcttgctcttcttgctgtcccaaattgagt
aatcactgcccttcttgtgcttcccccattggtgacaaaagatgtagagcaatggagaat
gttcttgaatcgacctttgtcccatgccaaaacgccgagctaggttgcactaagaacgtc
tcttacgggaaagaatcaacccataagagggaatgcaacttctctccttgctcttgtccg
gttcaagactgcaatttcattggcacatacaaggatctatacgttcactacagaattacc
cactcgaaaaattacttgttagataggttcacttgtggagtttccttcagcacgcagttg
aacatcaagaatgagacagtaattttgagggaaaatagtaagtatctgttgtttacaatg
cactgtttcaggaagccgtatggtgttattgttacaataagctgcatcgcaccatctgct
ccagaagttggagaattctcataccatctctcctacactgtggatgggcacactttgact
tacgaatcctcaaaggttaagagggttcttgaagtgagctgtcaaaccggtcaagagaat
ttcatgttgattcctcactgtttgttacgtggggatttgttgaagatggagctttgcatc
agatcaagaagatcaataaccgagcaagaagggtag
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