Raphanus sativus (radish): 108862490
Help
Entry
108862490 CDS
T06014
Name
(RefSeq) putative U-box domain-containing protein 50
Organism
rsz
Raphanus sativus (radish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
U-box
Pkinase
ATG14
DUF6706
E1_dh
Spc29
Motif
Other DBs
NCBI-GeneID:
108862490
NCBI-ProteinID:
XP_018492135
UniProt:
A0A6J0NXN3
LinkDB
All DBs
Position
5:32592143..32595195
Genome browser
AA seq
799 aa
AA seq
DB search
MEEVQNQVLEEEAKGSTTTMEKVYIAVGNDLQEGFKTIDWALKKWNNIPISIVLLHLCNI
SQDFVYTPFGKLPASSVSEEKLQVLRKYEDQKINKLLSKYVTFCKKLQVKAELHKVEKED
DSIQVLILDLISKLRITKLVMGITFMRSSSSWKSKSAISGSFHIYQNKPDFCEFYIICGG
KMVLLKRENDVNNNNIISWIGKMFHDPGRNLDRSSNSNDDPTASGSPWDKNLQEMEIYFQ
QLLSLNLEEDDEDNVQEEEEDENGDDGEDVLQHMNVEEKLEYVRRKVNEAKLMIDENMRQ
VKVNSERSDKAEWALSLCNCRIEELEDRIKEETERREKLQETLDSDRECIEQAKNDVEKG
KAKLGSLGELREELASKVKTMSDAKLQAEAELERVALEKREMVMEIEKLRNQRDVFNRRI
EFCKEKGVLEQEEEEEAKCGYREYVAEDIRLATEGYSDRLRLKSGGNWTNLYRGRIKHTT
MAVKVIGDRLSDEDFAAKVRLLNEVRHPNLVAIAGYCSEKPKCILFEYMHSGNLRDNLFT
SQRKTRRSKILKWHDRIRIAHQVCSGLGFLHSVKPKPIVHGRLTPSKILLDRNLVAKITG
FGLAMHQTDTKPDVMAFGVLVLHLLTGRNWPGLLKAMSMNQASILRDLDQTAGKWPLELA
KEFGALAVRCASVNRGGNVDYSTKEIMEELGKIVEKADEFRTKGGYEEAATSSNTDEADR
NEIPSVFICPILQEVMKNPHVAADGFSYELEAIEEWLSMGHDTSPMTNLRLDYQVLTPNH
TLRALIQDWHSKRAAQASS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttcagaatcaggtattggaagaagaagcaaaaggatcaacaacaacgatg
gagaaagtgtacatagctgtaggaaacgatttacaagaaggtttcaagacgatcgactgg
gctttaaagaaatggaacaacatcccaatctccatcgttcttctccatctctgcaacatt
tctcaagatttcgtttacaccccttttgggaagcttccagcgagttctgtgagcgaggag
aagcttcaagtactcagaaagtacgaggaccaaaagatcaacaagctgctgtctaaatac
gtcactttttgtaaaaagttacaggtgaaagcagagttacacaaggtggagaaggaagat
gattcaatccaagtgctaatcctagatttgatctcaaagctccgaatcacaaaactcgtc
atgggaatcaccttcatgagatcttcatcatcttggaaatctaagagtgcgataagcgga
tcgttccatatataccaaaacaaaccagatttttgcgagttttatataatctgtggaggc
aaaatggttttgctaaagagagagaacgatgtgaacaacaacaatattattagctggatt
ggtaaaatgttccatgatcctggaagaaacctagaccgttcatctaacagcaatgatgat
ccaacggctagtggaagtccatgggataagaacttgcaagagatggagatttatttccag
caattattgagtttgaatcttgaagaagacgatgaagacaatgtccaagaagaagaagag
gatgaaaatggtgatgatggtgaagacgtgctgcaacatatgaatgtagaggagaagtta
gagtatgtgagaagaaaggtgaatgaagctaaattgatgatagatgagaacatgagacaa
gtcaaagtcaactctgagagatcagacaaagctgaatgggctctctctttatgcaactgc
agaattgaagagctcgaagataggatcaaagaggaaaccgagaggcgagagaagctccaa
gagacgctagactcagacagagaatgcatcgaacaagcaaagaacgacgtcgaaaaagga
aaagcaaagctaggttctctaggtgagctacgagaagagctcgcaagcaaggttaagaca
atgtcagacgctaaactgcaagcagaagctgagctggagagggttgcgttagagaaacga
gagatggtgatggagatcgagaaacttaggaaccagagagatgttttcaaccgcaggatc
gagttctgcaaagagaaaggagtcttggagcaagaggaagaagaagaagcaaagtgtggg
tatagagagtacgttgcagaggatataagactggccacagagggttactctgatcggttg
aggttgaaatctggaggtaactggacgaacttgtaccgagggaggatcaaacacacgact
atggccgtgaaagtgatcggcgaccgtttatcggatgaggatttcgcagcaaaggtgagg
cttcttaacgaggttaggcatcctaacttggtggcaatagctggatactgctcggagaag
ccaaagtgcatactcttcgagtatatgcacagtgggaacttgagggataacctattcaca
tcgcagaggaagacaagaagaagcaagatactcaaatggcacgataggatacgtatagca
caccaagtctgctccggactcgggtttctacattcggttaagcctaaaccgatcgtccac
ggtcgcctcacgccttccaagatcctcttggaccgtaaccttgtagctaagataacgggg
tttggactcgcgatgcatcagaccgatacaaagcctgatgtgatggcttttggtgtgttg
gttcttcatcttttgacggggaggaactggcctggtttgctcaaggcgatgtcgatgaac
caggcgagtattctcagggatttggaccagacggctggtaagtggccgttggagttagct
aaggagttcggtgcactcgcggtgagatgcgcttcggttaacagaggagggaacgttgat
tattcgacgaaagagatcatggaggagcttggtaagatagtggagaaggcagatgagttt
agaaccaaaggaggatacgaggaagcagcaacgagttcgaataccgatgaagcggatcgg
aatgagataccgagtgttttcatatgtcctatacttcaggaagtgatgaagaatccacat
gtagcagcggatgggttctcatatgagctggaggcaatagaggaatggctaagcatggga
catgacacctctcctatgactaatctgagactggattatcaagttctaacacctaaccat
actcttcgtgctctcattcaagattggcatagcaaacgagcagcacaagcttcctcctaa
DBGET
integrated database retrieval system
