Raphanus sativus (radish): 130498783
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Entry
130498783 CDS
T06014
Name
(RefSeq) syntaxin-125-like
KO
K08486
syntaxin 1B/2/3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130498783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130498783
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
130498783
Membrane trafficking [BR:
rsz04131
]
SNARE
Syntaxin (Qa)
Stx-PM
130498783
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130498783
Exosomal proteins of other body fluids (saliva and urine)
130498783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
COG6_N
Syntaxin-6_N
CCDC-167
CD225
DUF6041
Helo_like_N
Erp_C
HTH_25
Stonustoxin_helical
DUF1664
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
130498783
NCBI-ProteinID:
XP_056848371
UniProt:
A0A9W3C9V7
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All DBs
Position
1:complement(4893988..4895268)
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AA seq
298 aa
AA seq
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MNDLFSNSFKRNQAQMSDVEAGQETMNLDKFFEDVENVKDDMKGVETLYKKLQGSNEECK
TVHNANKVKELRAKMDADVGQVLKRVKIIKQKLEALEKANANSRNVPGCGPGSSTDRTRS
SVVSGLGKKLKDLMDSFQSLRARMNDEYKETVERRYFTITGEKADERTIDNLIASGESEN
FMQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIE
SHVAKASSFVRRGTDQLQDAREYQKSSRKWTCYAIILFIVVFILLLIPAMPHIMLMLK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttattctcaaattcattcaagcggaaccaggctcaaatgagcgatgtcgag
gcaggtcaagaaacgatgaacctcgacaaattcttcgaggacgtggagaatgtcaaagat
gacatgaaaggtgtcgagactctttataagaagcttcaaggctcgaacgaagaatgcaag
acggtgcacaacgccaataaggtgaaggagctacgcgctaagatggatgctgacgtaggt
caggttcttaagagggtcaaaatcattaagcagaagctcgaagccctagagaaagccaac
gctaatagccgtaacgtcccgggttgtgggcccggttcgtctacggataggactcggtct
tctgtggtcagcggtctcgggaagaagctcaaggacttgatggatagtttccagagtcta
cgcgcgcgtatgaacgatgagtataaggaaaccgtagagcgcaggtatttcacgataaca
ggggaaaaagcggacgagcgaacgattgataacttgattgcgagcggcgagagtgaaaat
ttcatgcaaaaagcgattcaagagcaaggaagagggcagatcatggacacgatatctgag
atccaagaaagacatgatgcagtgaaggagatcgagaagaatctactggagttgcaccaa
gttttcttggacatggcggctctggtggaagcgcaggggcaacaactgaacaacatagag
agccatgttgcaaaggcgagctcgtttgtgagaagagggactgatcagctccaagacgcg
agagagtaccaaaagagctcgaggaaatggacttgttacgccatcattctcttcatcgtt
gtctttatccttcttctcattcccgctatgccacatattatgctcatgttgaaatga
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