Raphanus sativus (radish): 130503118
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Entry
130503118 CDS
T06014
Name
(RefSeq) putative pentatricopeptide repeat-containing protein At3g15930
Organism
rsz
Raphanus sativus (radish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
PPR_3
E_motif
PPR_long
Eplus_motif
TPR_19
Motif
Other DBs
NCBI-GeneID:
130503118
NCBI-ProteinID:
XP_056853745
UniProt:
A0A9W3CQE1
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MLIRNPVNPKASIFKALFNDYSHFISILESCNTTDQFKQLHSQIIIRGLEPNPTIQNKLI
LSWCSRLGGDMGYAYKLFVKMPEPDVVVWNNMIKGLSRVGCVKEGVGLYLSMLKKGVSPD
GYTFPFLLNGLKADDDEALACGEKLHCHVLKFGLGCNVYVQNGLVRMYSLCGLMGMARGV
FDRGRKDDVFSWNLMISGCNRMKQYEESVKLFAEMERRMVIPTSVTLLLVLSACSKVRDK
DLCKRVHGYVSVGSRESSLKLVNALVNAYAACGEMDTAVRIFNNMKTRDVISWTCIVKGF
VDIGNLELARTYFDDMPVRDRISWTIMIDGYLRGDCFNESLELFREMQNAGMVPDEFTMV
SVLTACAHLGALEIGEWVKTYIDKNKIKNDVVVGNALIDMYFKCGCSERAQKVFREMRRR
DKFTWTAMVVGLANNGQGEAAIKVFFQMQDMSIQPDEITYLGVLSACNHSGMIEQARIFF
SKMRSDHRIEPSLAHYGCMVDLLGRAGLVKEAYEMIRNMPMSPNSIVWGALLGASRLHND
ESVAELAAKKILELEPDNGAVYALLCNIYAACERWEDLREVRRKMVDIATKTIPGCSLIE
VNGVAQEFVCGDKSHLQSEEIHMKLEELAQESTFAEYLPSELLFEAG
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcttatacgcaatccagttaaccctaaagcatcgatttttaaggcactcttcaatgac
tactctcatttcatctccatcctcgaaagctgcaatacaacggaccagttcaagcaacta
cactcccaaatcatcatccgaggtttagaaccaaacccaacaatccaaaacaagcttata
ctctcctggtgtagtcgcctaggtggagacatgggttacgcctataagttgttcgttaaa
atgcctgaaccagacgtggtcgtgtggaacaatatgatcaaaggtttatctcgagtgggt
tgtgtcaaggaaggagttggattgtatttgagtatgctgaagaaaggtgtgagccctgac
gggtacacgtttccctttttgctcaacggtcttaaggcggatgatgatgaagcgttggct
tgtggtgagaagctgcattgccatgttctgaaattcggattgggttgtaacgtttatgtg
cagaatggtcttgtgcgaatgtactctttgtgtggactgatgggtatggctcgtggggtt
ttcgacagggggaggaaagatgatgtcttttcttggaacttgatgatctctgggtgtaat
aggatgaaacagtacgaagaaagtgtgaaacttttcgcggagatggagagaagaatggtt
attccaacttctgttaccttacttcttgttctctctgcttgctctaaggttagggataag
gatctttgtaaaagggttcatggatatgttagtgtgggttcgagagagtcaagtttgaag
ctggtgaatgctctggtcaatgcatatgctgcttgtggggagatggatacagcggtgagg
attttcaataatatgaagactagggatgtgatttcttggacatgtattgtcaaagggttt
gttgacatagggaatctagagttagcaaggacgtactttgatgatatgccagtgagagat
agaatctcttggactattatgatcgatggttacctacgaggtgattgctttaatgaatct
ctggaacttttccgtgagatgcaaaatgcagggatggtaccagatgaattcaccatggtt
agtgttctcacagcttgtgctcatctaggtgccttggagataggtgagtgggttaagaca
tacatagacaaaaacaagatcaagaacgatgttgttgtagggaatgctttgatcgatatg
tacttcaaatgcgggtgttctgagagagcgcagaaggtttttcgtgagatgcggcggaga
gacaagttcacatggacagccatggttgttggtcttgcgaacaatggacaaggtgaagct
gccattaaagttttctttcaaatgcaagacatgtcgatacaaccagatgagattacttac
ctcggtgttctctctgcttgtaaccatagtggtatgatagagcaagcgaggatctttttc
tccaagatgagaagtgaccataggattgagccgagtttagcacactatggatgtatggtt
gacctgcttggtagagctgggctggtcaaggaagcgtatgagatgataaggaacatgccg
atgagtccaaactcgattgtgtggggagctctactcggtgcttctagacttcataatgat
gaatcagtggctgagttggcagctaagaagattctagagctggaaccggataatggggct
gtttatgctttgttatgcaatatatatgcagcttgcgaaagatgggaggatctgcgagaa
gtcagaagaaagatggtggacatagcaaccaagacgataccagggtgcagtttaattgaa
gtaaacggtgtagctcaggagtttgtttgtggagacaagtcacatcttcaatcagaagag
attcacatgaaactagaagagttagcacaagagtcgacgtttgcagagtacttaccttct
gaattgttgttcgaggctgggtaa
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