Raphanus sativus (radish): 130511793
Help
Entry
130511793 CDS
T06014
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-3
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03010
Ribosome
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
130511793
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130511793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rsz03011
]
130511793
04121 Ubiquitin system [BR:
rsz04121
]
130511793
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
130511793
Ribosome [BR:
rsz03011
]
Ribosomal proteins
Eukaryotes
Small subunit
130511793
Archaea
130511793
Ubiquitin system [BR:
rsz04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
130511793
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130511793
Exosomal proteins of colorectal cancer cells
130511793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Plexin_RBD
TBK1_ULD
Ubiquitin_5
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
130511793
NCBI-ProteinID:
XP_056865431
UniProt:
A0A6J0ML39
LinkDB
All DBs
Position
4:complement(50501862..50502546)
Genome browser
AA seq
157 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE
CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGAEA
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctaacggggaagacgataaccctcgaggtcgagtcctcc
gacaccatcgacaacgtcaaggccaagatccaagacaaggaaggcatccctccggaccag
cagcgcctcattttcgccggaaagcagctcgaggacggacgcaccctcgccgactacaac
atccagaaggagtcgacgcttcacctggttctccgtctgagaggaggagcgaagaagagg
aagaagaagacgtacacgaagccgaagaagatcaagcacaagcacaagaaggtgaagctc
gcggtgctccagttctacaaggtcgatggttccggcaaggtgcagaggctgaggaaggag
tgtcctaacgcgacttgcggtgctgggactttcatggcgagtcattttgatcgtcattac
tgtggtaagtgtgggcttacttatgtttaccagaaggagggtgccgaggcttga
DBGET
integrated database retrieval system