Raphanus sativus (radish): 19816359
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Entry
19816359 CDS
T06014
Symbol
rbcL, RadishC_p029
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00630
Glyoxylate and dicarboxylate metabolism
rsz00710
Carbon fixation in photosynthetic organisms
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01200
Carbon metabolism
Module
rsz_M00165
Reductive pentose phosphate cycle (Calvin cycle)
rsz_M00532
Photorespiration
rsz_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
19816359 (rbcL)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
19816359 (rbcL)
Enzymes [BR:
rsz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
19816359 (rbcL)
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Top1B_N_bact
Motif
Other DBs
NCBI-GeneID:
19816359
NCBI-ProteinID:
YP_009046922
UniProt:
A0A068L8Y3
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Position
Pltd:53847..55286
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AA seq
479 aa
AA seq
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MSPQTETKASVGFKAGVKEYKLNYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALAALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL
NATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRLSGGDHVHAGTVVGKLEGDRESTLGFVDLLRDDYVEKDRSR
GIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLAVEGNEIIREACKWSPELAAACEVWKEITFNFPTIDKLDGQD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagagactaaagcaagtgttggattcaaagctggtgttaaagagtat
aaattgaattattatactcctgaatatgaaaccaaggatactgatatcttggcagcattc
cgagtaactcctcaacccggagttccacctgaagaagcaggggctgcggtagctgctgaa
tcttctactggtacatggacaactgtgtggaccgatgggcttaccagccttgaccgttac
aaaggccgatgctaccacatcgagcccgttccaggagaagaaactcaatttattgcgtat
gtagcttaccccttagacctttttgaagaagggtctgttactaacatgtttacctcaatt
gtgggtaacgtatttgggttcaaagccctggctgctctacgtctagaggatctgcgaatc
cctccggcttatactaaaactttccagggaccacctcatggtatccaagttgaaagagat
aaattgaacaagtatggacgtcccctattaggatgtactattaaacctaagttggggtta
tccgcgaagaactatggtagagcagtttatgaatgtctacgtggtggacttgattttacc
aaagatgatgagaatgtgaactctcaaccatttatgcgttggagagaccgtttcttattt
tgtgccgaagctatttataaatcacaggctgaaacaggtgaaatcaaaggacattatttg
aatgctactgcgggtacatgcgaagaaatgatgaaaagagctatatttgccagagaattg
ggagttcctatcgtaatgcatgactacttaacagggggattcaccgcaaatactagtttg
gctcattattgccgagataatggcctacttcttcacatccaccgtgcaatgcacgctgtt
attgatagacagaagaatcatggtatgcacttccgtgtactagctaaagctttacgtcta
tcgggtggagatcatgttcacgcgggtacagtagtaggtaaacttgaaggagacagggag
tcaactttgggctttgttgatttactgcgcgatgattatgttgaaaaagaccgaagccgt
ggtatctttttcactcaagattgggtctcactaccaggtgttctacctgtggcttcaggg
ggtattcacgtttggcatatgcctgctttgactgagatctttggagatgattccgtacta
caatttggtggcggaactttaggccacccttggggaaatgcaccgggtgccgtagctaac
cgagtagctctagaagcatgtgtacaagctcgtaatgagggacgtgatcttgcagtcgag
ggtaatgaaattatccgtgaggcttgcaaatggagtcctgaactagctgctgcttgtgaa
gtatggaaggagatcacatttaacttcccaaccatcgataaattagatggccaagactag
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