Ramlibacter tataouinensis: Rta_11430
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Entry
Rta_11430 CDS
T01544
Symbol
gabD
Name
(GenBank) candidate succinate-semialdehyde dehydrogenase (NADP+)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00250
Alanine, aspartate and glutamate metabolism
rta00310
Lysine degradation
rta00350
Tyrosine metabolism
rta00650
Butanoate metabolism
rta00760
Nicotinate and nicotinamide metabolism
rta01100
Metabolic pathways
rta01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rta_11430 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Rta_11430 (gabD)
00310 Lysine degradation
Rta_11430 (gabD)
00350 Tyrosine metabolism
Rta_11430 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
Rta_11430 (gabD)
Enzymes [BR:
rta01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
Rta_11430 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
Rta_11430 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
Rta_11430 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AEG92228
UniProt:
F5Y110
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Position
1177467..1178906
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AA seq
479 aa
AA seq
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MTYPSTQLFINGQWQDAADGRTLAVFNPATGKEIGRVAHASKADLDQALAAAQKGFETWR
DMTAADRSKVMRKAAGFMRERAEAIGRLLTQEQGKPLAEAKGEALAAADIIEWFAEEGFR
VYGRIVPSRWNLSVRQMVVKDPVGPVAAFTPWNFPINQVVRKVGAALAAGCSMLVKAPEE
TPAGPAELIRAFQDAGLPPGVLGLVYGNPAEISSYLIPHPVIRKITFTGSTPVGKQLAAM
AGQHMKRVTMELGGHAPVIVCEDADIALAAKSAGSAKFRNAGQVCISPTRFLVHESVKKE
FASALAQQAQKLKVGDGLAEGTQMGPLANPRRLTAMAEFTKDAVAKGATVLAGGERIGDA
GNFWQPTILADVPVEAKVFNDEPFGPMAAIRSFNTLDEAIAESNRLPYGLAGYAFTKSLK
NADLLARRVEVGMLWVNMPAMPSAELPFGGVKDSGYGSEGGPEALEAYLNTRAVSVANV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcccagcacccagctcttcatcaacggccagtggcaggacgcggcggacggc
cgcacgctggcggtgttcaacccggcgacgggcaaggagatcggccgcgtggcccatgcg
tccaaggccgacctggaccaggcgctggccgccgcgcagaagggtttcgagacctggcgc
gacatgaccgccgccgaccgcagcaaggtcatgcgcaaggccgccggcttcatgcgcgag
cgcgccgaggccatcggccgcctgctgacgcaggagcagggcaagccgctggccgaggcc
aagggcgaggccctggccgcggccgacatcatcgagtggttcgccgaggagggcttccgc
gtctacggccgcatcgtgccctcgcgctggaacctgtcggtgcggcagatggtggtgaag
gacccggtgggcccggtggccgcgttcacgccctggaacttcccgatcaaccaggtggtg
cgcaaggtgggcgcggccctggccgccggctgctccatgctggtcaaggcgccggaggag
acgcccgccggcccggccgagctgatccgcgccttccaggacgccggcctgccgcccggg
gtgctgggcctggtctacggcaacccggccgagatctccagctacctgatcccgcatccc
gtgatccgcaagatcaccttcaccggctccacgccggtgggcaagcagctggccgcgatg
gctggccagcacatgaagcgcgtgaccatggagctgggcggccatgcgccggtgatcgtc
tgcgaggacgccgacatcgcgctcgcggccaagtccgcgggcagcgccaagttccgcaac
gccggccaggtgtgcatctcgcccacgcgcttcctggtgcacgagagcgtcaagaaggag
ttcgccagcgcgctggcgcagcaggcccagaagctcaaggtgggcgacggcctggccgag
ggcacgcagatgggcccgctggccaacccgcgccgcctgaccgccatggccgagttcacc
aaggacgccgtggccaagggcgccaccgtgctggccggcggcgagcgcatcggcgatgcc
ggcaacttctggcagcccaccatcctggccgacgtgccggtggaggccaaggtgttcaac
gacgagcccttcggccccatggccgccatccgcagcttcaacacgctggacgaggccatc
gccgagtccaaccgcctgccctacggcctggccggctatgcgttcaccaagtcgctgaag
aacgccgacctgctggcgcggcgagtcgaggtcggcatgctgtgggtcaacatgccggcc
atgccctcggccgagctgcccttcggcggcgtcaaggactcgggttatggctccgaaggc
ggccccgaggcgctggaggcctacctcaacacccgcgcggtcagcgtggcgaacgtctga
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