Rathayibacter toxicus WAC3373: APU90_03395
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Entry
APU90_03395 CDS
T04269
Name
(GenBank) succinyl-CoA synthetase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc00020
Citrate cycle (TCA cycle)
rtc00640
Propanoate metabolism
rtc00660
C5-Branched dibasic acid metabolism
rtc01100
Metabolic pathways
rtc01110
Biosynthesis of secondary metabolites
rtc01120
Microbial metabolism in diverse environments
rtc01200
Carbon metabolism
Module
rtc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rtc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
APU90_03395
00640 Propanoate metabolism
APU90_03395
00660 C5-Branched dibasic acid metabolism
APU90_03395
Enzymes [BR:
rtc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
APU90_03395
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
CPSase_L_D2
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
ALS56930
UniProt:
A0A0C5BRD0
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All DBs
Position
complement(743390..744553)
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AA seq
387 aa
AA seq
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MDLFEYQARDLFEKHGVPVLPGIIAETPEEARSAAEKLGGVTVVKAQVKVGGRGKAGGVK
VAKTPEEAEEAAKAILGLDIKGHVVTRVMVAGGARIDREFYFSVLLDRANRSYLSLTSYE
GGMEIEQLAVERPEALARVEVVPGRGIDLAKAEQIAREAKFPEELIAKVAPVLVTLYQVY
TAEDATLVEVNPLVLTEEGTIVALDGKVSLDENASFRHADHEALEDKEATDPLEAKAKKN
DLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHNGVKPANFLDIGGGASAQVMANGLD
VVLGDDQVTSVFVNVFGGITACDAVANGILQALDILGDVATKPLVVRLDGNKVEEGRAIL
EAAANPLITLAATMDEGADKAAALAAA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtggatcttttcgaataccaggcccgtgatcttttcgagaagcatggtgttcccgtgctt
cctggcatcatcgccgagacaccggaggaggcgcgcagcgccgccgagaagctgggtggc
gtcaccgtggtcaaggcacaggtcaaggtcggaggccgcggcaaggcgggtggggtgaag
gtcgcgaagactccggaggaggcagaggaagcggcgaaggcgatcctcggcctcgacatt
aagggccacgtcgtcacgcgggtcatggttgccggtggcgcgcggatcgaccgcgagttc
tacttctcggtcctgcttgaccgggccaatcgttcctacctttcgctcacctcctacgag
ggcggcatggagatcgagcagctcgccgtcgagcgtcccgaggctctcgcccgcgttgag
gtcgtccctggccggggcatcgacctcgccaaggctgagcagattgcccgcgaagcgaag
ttcccggaggagctcatcgccaaggttgcgccggtgctcgtcaccctctatcaggtctat
acggctgaggacgcgaccctggtcgaggtcaacccgctcgtgctcaccgaggagggcacc
atcgttgcgctcgatggcaaagtctcgctcgacgagaacgcgagctttcgccatgccgac
catgaggccctcgaagacaaggaggccaccgacccgctcgaggcgaaagctaaaaagaat
gatctcaactatgtcaagctcgacggtgaggtgggcattatcggcaacggcgccggtctg
gtcatgtcgaccctcgacgttgtcgcttacgccggcgagaagcacaacggggtgaagccg
gccaacttcctcgatatcggcggcggagcctccgctcaggtgatggcgaatggcctggac
gtggtcctcggcgacgatcaggtcacgagcgtcttcgtgaatgttttcggcggcatcacc
gcgtgcgacgccgtcgccaacgggatcctccaggcgctcgatatcctcggcgacgtggct
accaagccgcttgtcgtgcgccttgacggtaacaaggtggaggagggccgcgcgatcctc
gaggccgccgccaacccactcattaccctggccgcgacgatggacgaaggcgccgataag
gccgccgcactcgctgccgcgtaa
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