Rissa tridactyla (black-legged kittiwake): 128905080
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Entry
128905080 CDS
T09443
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128905080 (AFF3)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128905080 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
MACPF
Motif
Other DBs
NCBI-GeneID:
128905080
NCBI-ProteinID:
XP_054046560
LinkDB
All DBs
Position
1:73472838..73800058
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AA seq
1239 aa
AA seq
DB search
MDSFDLALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQEDGAFNTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQTSLPKPDEHLVADSRPPP
PPPISSTTSSTPAALPAQQSKSAAMGWQKTGHNAASDGQQRASKHGHRSLESHKGDFKLA
SQKPSLEKLKRYASSPTSSSSSSSNTAQQSSLRATLGDNVNRVQQPAKLNCSSDGGAQAQ
ERPAKHGGGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKLPAETTKSY
RGVPSNKPDSARTKSKIAKFSIPKQEEDSGTGDNSCIEEILREMTHSWPPPLSAIHTPGK
AEQSKFPFPNKESQQGSTGHSNTRKSDVEPKSPEKSATHTSMLEDDLKLSSDEEENDQQA
AQRSALRVLSDSLVVPQSNTRASGLSSKGSSSSSSSESETSSESDSESESSSSESDGSKP
SHYSSPEPEPPSSNKWQLDKWLNKVTPHKAPILTHHDGTALEAHPYYGRVKAERQESEKT
PATGPVEHRSGEGRATTTVTAAIGDGPRPRTANKAPGSKGGRQKSPPAADGGPPRRAAGK
KAPRRAERTSAGDGPHCPGVEEPPSSHSFLESTAGEAPRARPGSGSSGGGCRAGHRRGEP
RSAAAGEKRRARGPSKTAPKSKEFIETESSSSSSSSDSGSESEREERPLPKAPLTAGAEP
RAKDAGTGAASKPHGGCSAFGSINARTSSEIAKELEEQFYTLVPFGRNELLSPLKDSDEV
KSLWVNIDLALLSRIPERLPEEPLAMSAGASQAASLPQGSSADPPAEKGLPKSRRKRKCE
NEEECRDIKKTHLERESSSRLAASAHSITTANHCNMNENSLAIPINKNEKMLRSPVSPLS
DASKHKYSNDDLTSSSRPNGSSLLPSISSSKKHKGEIQSQPHPGDLNKAIHINSENVLCN
KPQSQTESWSPLSSTPRDCRRTKLIFDDMPRNADYFMQEAKRKKHKADAMVEKFGKALNY
AEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHSGPNATPEDKQLAALC
YRCLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAAQNPSPWGASGKSTGTPSPMSPSP
SPVSSVGSQGSTGAPSPSPIISIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENRD
FFNDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSAHLS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagctctcctgcaggagtgggacctcgactctctctgtgtctac
gagccggatagaaacgtactgcgaaggaaagaatgggaaaggagaaatcaggaggcccag
caggaggatggcgcgtttaacacgagttactccctcttcagtgaaccatacaagactaac
aagggggatgagctctcgaatcgcatccagaatacgctgggcaactatgatgaaatgaaa
gacttgttaactgaccgatcaaaccagagccatcttgttggggttccaaaacctggggtt
cctcagacatctctccccaagcccgatgaacatcttgtagcagactcgagaccgccgcct
cctcctcccatttccagcactacttcttccacaccagcagccctacctgcccagcagagc
aaaagcgccgcgatgggttggcagaagaccgggcacaatgccgcttcagatggccagcag
agagcaagcaagcacgggcaccggtcactggagtcacacaagggtgacttcaaactggca
agccaaaaacccagtttggagaaactaaaacgctatgcatcgagtcccacctcctcctcc
tcttcctcctccaacactgcccagcaaagctcactgagggccacgctaggagacaatgtc
aacagagtgcagcagccggcaaagctcaactgtagctcggatggaggagctcaagcgcaa
gagaggccagcaaagcatggtggcggacactgcgtccaaaacttcccgccctctcttgct
tcaaagcccagtctggttcagcagaaaccaacagcttatgtaaggccaatggacggtcaa
gaccaggctcctgatgagtctccaaagctgaagttaccagcagagacgaccaagtcgtat
aggggagtgccttctaacaagcctgattcagccaggaccaagtcaaagatagccaagttc
agcattcctaagcaagaagaggacagtggaacaggagataacagctgcattgaagaaata
ctgcgggagatgacccattcatggcctccaccactgtcagctattcacacaccagggaag
gcagaacaaagcaagtttcccttcccaaacaaggagtcgcaacagggatctacaggacac
agcaatacaaggaaaagtgatgtagagccaaagagtccagagaaaagcgcaacccataca
tcaatgctagaagatgacctcaagttaagcagcgatgaagaggagaatgaccagcaggca
gcacagagatctgctctccgcgttctatctgacagcctggtggtgccacagtccaacacc
cgagcctcgggactctccagcaaggggtcgagcagcagcagctccagtgaatcagagacc
agctcagagtctgactcagagagcgagagcagctccagcgagagtgacggcagcaaaccc
tcacattactccagcccagagcctgagccaccctcatctaacaagtggcagctggacaag
tggctgaataaagtcaccccgcacaaagcacccatcctgacccaccatgacggcacggcg
ctggaggcccatccctactacggacgcgtgaaggcggagcggcaggagagcgagaagacc
ccggccaccggcccagttgagcaccgcagcggggagggccgtgccaccaccaccgtcacc
gccgccattggggacggaccgcggcccaggaccgccaacaaagccccgggcagcaaaggc
ggccggcaaaagtcaccccctgcagctgacggcgggcctccgaggcgggcggcggggaag
aaggcaccgcggcgggctgagaggacctctgccggggacggcccccactgccccggggtg
gaggagcctccttcgagccacagctttctggaaagcactgctggagaggcgccgagggcc
cggcccggcagtggcagcagtggcggtggctgcagagcagggcatcgccgaggggagccc
cgctcggccgcggcaggcgagaagcgtcgggcccggggaccgagcaaaacggcgcccaaa
tccaaggagttcattgagaccgagtcttcgtcctcgtcatcgtcctccgactcgggctct
gagtcagagcgggaggagcgcccactgcccaaggcgccgctcacagctggggccgagccg
cgggccaaggacgcggggaccggcgccgccagcaaaccccacggcggctgcagtgccttt
ggctccattaatgccaggactagtagtgaaatagcaaaggagctggaggaacagttttac
accctggttcctttcggtaggaatgagctcctgtctcctctgaaagacagtgatgaggta
aagtcgctgtgggtcaacattgacttggctcttttgtccaggattccagagcgtttgccc
gaagagccgctggccatgagcgccggagcaagccaggcggccagcctcccgcagggtagt
agtgctgacccccccgcagagaaaggtttaccgaaatctagaaggaaacgcaagtgtgag
aatgaggaagagtgcagagacatcaagaagactcacttagagcgagagagttcttcacga
ttagctgcctctgcccacagcatcacaacagcaaatcactgcaatatgaatgaaaatagc
ttggcaataccaataaataaaaatgagaaaatgcttcggtcacccgtctctcccctctct
gatgcatcaaaacacaaatactccaacgatgatttaacttcctccagcagacctaatggc
agcagtctattaccttccatctcctccagcaaaaaacataagggtgaaatccagtcgcag
ccacatcctggagacttaaataaagcaattcacatcaattcggaaaatgttctctgcaat
aagccccagtcccaaacagagtcttggtcacctctgtccagcacacccagggactgcaga
aggacaaagcttatctttgatgatatgccacgcaatgcagattactttatgcaggaagct
aaacggaagaagcataaagcagatgcaatggtggaaaagtttggaaaggcactgaattat
gcagaagcagcactatcgtttattgagtgtggaaatgcaatggaacaaggcccaatggaa
tctaaatccccttatacaatgtattcagaaacagttgaactcatcaggtatgcggtgaga
ctaaaaacccactcaggccccaacgccactccagaagacaaacagctggcagcattatgt
taccgctgcctggcccttctgtactggaggatgttccgactcaagagagaccacgcggtc
aagtattcgaaagcgcttattgagtatttcaagaattcgtcaaaagctgcccagaaccca
tctccttggggtgccagtggaaagagcacaggaactccatcacccatgtcgcctagccct
tctccagtcagctctgtaggatcccaggggagcacaggggccccttccccatctcctatc
atcagcatcccacagcggattcatcagatggctgccaaccacgtcagcatcaccaacagc
atcctgcacagctatgactactgggagatggctgacaacctggccaaggaaaacagagat
ttttttaacgacttggatgcattgatggggcctatcaccttgcacagcagtatggagcat
ttagttcagtacactcaacaaggacttcactgggtgcggaatagcgcccacttgtcataa
DBGET
integrated database retrieval system
