Rissa tridactyla (black-legged kittiwake): 128905144
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Entry
128905144 CDS
T09443
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128905144 (CHD7)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128905144 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
128905144
NCBI-ProteinID:
XP_054046670
LinkDB
All DBs
Position
2:complement(40715645..40851245)
Genome browser
AA seq
3013 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPSLQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHGSGAG
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQPQPTQPPQAPSGP
PGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLS
HVPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRS
QTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSN
SGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPG
SAGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHMR
PNGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPHH
QSWAQLHQSPQNTPQKVPVLQHSPSEPYLEKPVPDMTQVSGPNTQLVKSDDYLPSIEPQP
QQKKKKKKNNHIAAEGPSKGFGKEDFPGGLDSQNLSRNSVDCSQEEKKKKKKPKAKKEPK
DPKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKASNKKTDSENSAAKKKVNKG
KEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAA
GRDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKMENGEEVEIEEFYVKYKNFSYLHC
QWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSRSTDDNG
EPVMHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSES
SREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGP
FLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFH
AIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQ
NTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL
APKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLI
NGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRC
LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV
LQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTI
TIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRV
RKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGW
GRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRA
LVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKV
LLRVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIGV
FKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYK
PTRTPFKDEIDEFANSPPEDKEESIEIHPNKHSESNAELGQLYWPNTSTLTTRLRRLITA
YQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVS
TFGIIFDPVKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPDL
STMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKD
LLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGNVNTVSSVNPLGAGCSQTPPI
VPSTPVQEEKTTEQTESKVEGSENPAAKEKPDIKEETDTADKDTKPDCDAEAEPGSVKCE
LKDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGTVSQGKNFDEESNASMS
TARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRR
QMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASVSGSEDITASPQLSKEDALNLSVP
RQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSN
FSPVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRK
NVEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLEDG
TRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLD
INTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPE
SMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTS
LQNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLLN
NPITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSAA
TAATTATATTTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPAL
AGLQNAVGSNEEKAADKTEGTAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSL
DGGEEIENNENDE
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ttggaaggtcttggagaatgtggatatcctgaaaatacagtaaatcctatggggcagcaa
atgcccatggatcaaggatttccctctttacagtcatctcttcatcatccccctgcaaat
caaaatcaagccaagttgacccattttgatcactataatcaatacgaacagcagaaaatg
cacctgatggatcagccgaacaggatgataagcaatgcccctgggaatggtatagcgtct
cctcattcacagtatcacaaccctccagttcctcaggttcctcacggcagtggtgctggt
ggtcagatgggagtctatcccagcatgcagaacgaaaggcacgggcaaccctttgtagac
agtggctccatgtggggaccacgggcagttcaagtgccagaccagataagagcaccgtac
cagcagcaacagcagcagcaaccgcaaccgacacagccgccacaggcaccctccggaccc
cctgggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggtgat
ttttcaatgcagcagcatggtcagccgcaacagcagaggatgaaccagttttctcaaggc
caagaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttgtct
catgtgccccagcagaatcccagtatggcaccttctttgcgacactcagtccagcaattt
caccaccatccccccactgctctccatggagaatcagtagcccacagtcccagattctcc
cctaatcctccccagcagggtgctgttaggccgcaaacacttaattttagttctcggagc
cagacggtaccctcacctactataaacaactcagggcagtattctcgatatccttacagt
aaccttaatcagggattagttaataatacagggatgaatcagaatttaggccttacaaat
aacactccaatgaatcaatctgtaccaagatacccaaatgctgtcggatttccatcaaac
agtggtcaaggactaatgcaccagcagcccatccaccctagtggctcacttaaccaaatg
aacacacaaactatgcacccttcacagcctcagggaacttatgcctctccacctcccatg
tcacctatgaaagcaatgagtaatccagcaggtacacctcctccacaggttagacctggt
agtgctggaataccaatggaagttggcagttatccaaatataccccatcctcagccgtca
caccagccccctggtgccatgggaattggacaaaggaatatgggcccccgaaacatgcaa
cagaatcgtccatttatgggtatgtcttcaacaccacgggagatgggtgggcacatgaga
ccaaatggttgtccaggtgttggccttgcagatccacaagcaatacaagagcgactaata
tctggccagcagcttcctagtcaacagcagtcttttcaacagcaaatgccaacctgtcct
cccatgcagcctcatccagggatacatcatcagtcttcaccacccccacatcctcatcat
cagtcttgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtcctt
cagcattctccgtcggaaccctatttagagaaaccagtgccggatatgactcaggttagt
ggaccgaatacccagctagtgaaaagcgatgattatctgccatcaattgagccgcagcca
cagcaaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaaggt
tttggtaaggaagattttcctgggggacttgacagccagaatctaagcagaaactcggtg
gattgctcccaagaagagaagaagaaaaagaaaaagcccaaggcaaaaaaagaaccgaag
gatcctaaagaacccaaggaaaagaaggaacccaagacccccaaagtccctaagacccct
aaagagccaaaggaaaagaaagcaaaaaataccacgccaaaacccaagaccagcaaaaag
gctagtaacaagaaaacagattcagaaaatagtgctgcgaagaaaaaggttaacaaggga
aaggaaggttctgaaaattccgatttggaaaaaactccgccaccatcacctcatcctgaa
gatgaagatgacccaggggttcagaagcgacgctccagcaggcaggtgaagaggaagcgt
tatacagaagacctggagttcaagatttcagatgaggaggctgatgatgctgatgctgct
ggaagagactctccttcaaatacttctcagtcagagcaacaggaatctgctgatgctgaa
ggtcctgttgtggagaaaatcatgagtagccgttcagtcaagaaaaagatggagaatgga
gaggaagtagaaatagaggaattctatgtaaagtacaaaaacttttcttaccttcattgt
cagtgggcatctgtggaagagctggacaaagacaagagaattcagcagaagattaagcgg
tttaaggcaaaacagggccagaacaaattcctttcagaaattgatgatgagctttttaat
ccagattatgtggaagttgatcgaatcatggatttttcacgtagcacagatgataatgga
gagcctgtaatgcattatctggtgaaatggtgttcgcttccttatgaagacagcacttgg
gagctcaagcaagacatcgaccaagctaagatcgaagaatttgagaaactgatgtctagg
gagccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggagagt
tccagggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactgg
cttcttttcaattggtacaacacgcgaaactgcattttagcagatgaaatggggttggga
aagactatccagtccattacgtttctctatgagatatatttgaaaggaatccatggtcct
ttcttggttattgcaccgttgtctacaattcccaactgggaaagggagttccgcacctgg
acagagttgaatgtggttgtgtatcatgggagtcaagcaagccggcggaccattcagttg
tatgaaatgtatttcaaagatccacagggtcgtgtgataaaggggtcctacaagttccac
gccattatcacaacatttgaaatgatcttgactgactgcccggagctgcgtaacattcca
tggcgttgcgtggtcattgatgaggcccacaggctgaaaaacaggaactgtaagcttttg
gaaggactcaagatgatggatctggaacataaagtgctgcttactggaacgcctttgcaa
aatacagtagaagaactatttagcttgcttcacttcttggaaccaggtcgcttcccatca
gaaaccacattcatgcaagaatttggtgatctgaagactgaagaacaggtgcaaaaactc
caagctattctgaaaccgatgatgctgagacgtctcaaggaggatgtagaaaagaacctg
gcccccaaagaggaaaccatcattgaagttgagctgacaaatattcagaagaaatactat
cgtgctattcttgaaaagaatttcacatttctttccaagggtggaggtcaggcaaatgta
cctaatcttttaaacactatgatggaactaagaaaatgctgcaatcatccgtaccttatt
aatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctcca
gattttcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctg
ctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgc
ttggacatactggaagactacctcattcaaagacggtacccatatgaacgaattgatggc
cgagtaagaggcaacttacgtcaggcagctattgacaggttttcaagacctgattctgat
aggtttgttttcctgctgtgtacaagggcaggaggtttgggcattaatcttactgctgct
gatacctgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaagca
cgatgtcacagaataggacagagcaaatcagtgaaaatttacaggttgataacaaggaat
tcttatgaaagggaaatgtttgacaaagctagcttgaagcttggccttgataaggctgtg
ctacaatctatgagcggaagagaaaacgctacgaatggggtgcaacagctttctaagaaa
gaaatagaagatcttcttcgaaagggtgcatatggtgctctgatggatgaggaagatgaa
gggtctaagttttgtgaagaggatattgatcagattcttttaaggcgaacacacacaatt
actattgaatctgaaggaaaaggctcaacatttgcaaaggctagttttgttgcatctggg
aacaggacagacatttccttggatgaccctaatttttggcagaagtgggcaaagaaagct
gagctggatattgatgctttaaatggaaggaataacctagttattgacacaccaagagtc
agaaagcaaaccagactctacagtgcagtcaaagaggatgaactgatggagttttcagac
ctggaaagtgattctgaagaaaagcctagcacaaagccccgtaggcctcaggacaaatca
cagggatatgcaagaagtgaatgtttcagggtggagaagaacttactggtttatggctgg
ggtcggtggactgacatcctctcacatgggcgctataaacgtcagctaacagaacaagat
gtggaaaccatctgccggactatcctggtatattgtcttaatcattacaaaggggatgaa
aatatcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgagct
ttggttaatcattccggtctgtctgcaccagtgcccagagggcggaaaggcaagaaagta
aaagcccagagttcacagccaatgctgcaagatgcggattggctcacaacctgtaatcca
gatgtattatttcaagaagacagctataggaaacatctcaaacatcactgtaataaggtc
ctgctgcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagcagac
aagatcttagagggtgctgactcaagtgaagtagatgtatggatacctgagccattccat
gcggaagttcctgcagactggtgggataaggaggcggataaatcccttttaattggagtg
ttcaaacacggttatgagaagtacaattctatgagagctgatccagcactgtgctttctg
gaacgggttggcatgcctgatgcgaaggccatagctgccgaacagagagggacagacatg
ttagcagatggtggtgatggcggtgagtttgacagagaggatgaagatccagaatacaag
ccaaccagaactcctttcaaggatgaaattgatgaatttgcaaactcacctccagaagac
aaagaggaatccatagaaatacacccaaacaagcacagtgaaagcaatgctgagttaggc
caactctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattactgcc
tatcagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgc
aggagacgtcggcctcgggaagaagtgagggcactagaagcagaaagggaagctataata
actgaaaaacgacaaaagtggacaagaagagaagaagctgatttttatcgtgtggtgtct
acttttggaattattttcgatcctgtaaaacatcaattcgactggaatcaattcagagca
tttgccaggcttgataaaaagtccgatgaaagcttggaaaagtattttaatggctttgtg
aatatgtgtagacgagtgtgccgaatgccagtcaaaccggatgatgaaccacctgatctt
tccactatgattgagccgatcacagaagagcgtgcttctagaactttatatcgcatagaa
ctgttgcggaaaatccgtgagcaggttctccatcacccacagttgggagagaggctaaaa
ctttgccaaccaagcttggacctgccggagtggtgggagtgtggtaaacatgacaaagac
ttactgattggtgctgctaaacatggagtcagtaggacagattatcacattctgaatgat
cctgaactctcttttcttgaggctcacaaaaactttgctcaaaacagagggacgggtaat
gtaaatactgtctcttctgtaaaccctctgggtgctggctgcagtcaaacaccacctatt
gtcccatccacaccagtacaagaagaaaagactacagaacaaacagagtctaaagttgaa
gggtctgaaaatccagcagccaaagaaaagcctgatatcaaagaggagacagatactgca
gataaagacactaaaccagactgtgatgctgaggctgagcctggctctgttaaatgtgaa
ttgaaagacatagaaatgagtacagacgtagacccaaaatctatttctgagaaaggttcg
gaagaagatgaagaggagaaactggatgatgatgataaatcagaagaatcctcccaacct
gaagcaggaacagtttctcagggtaagaattttgatgaagaaagcaatgcttctatgagt
accgcaagggatgaaacacgtgacggattctacatggaagatggggatccctctgtggtg
cagctgcttcatgagagaacatttgccttctctttctggcctaaggaccgagtaatgatc
aaccgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaataggcgc
cagatgtttgatttccaggggctcatacctgggtatactccaacagctgtggacagccct
ctacaaaaaaggagctttgcagagctctccatggttggtcaagccagcgtcagtggcagt
gaagatatcactgcttctcctcagttatcaaaggaagatgcactcaatttatcggttcca
cgtcagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgccaagagg
agaaatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaatgga
caagaaaaggttgtagatttatcaaaggcctcacgagaggcaacaagttctacctcaaat
ttttcacctgttacttcaaagtttatcttgcctaatgtctccacacccgtgtctgatgcc
tttaaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcatcta
ctaaatggctctttaatagatggagaaccacccatgaagaggaggagaggaaggaggaaa
aatgtagaagggcttgatctgttatttatgagcaacaaacggacatcattgactgtagag
gatgcagaagtgaccaaagcttttgaagaagatatggaagccctaccagcaaggaacatt
ccatctcctggtcaactggacccagacactcgcatccctgtaatcaatctagaggatggg
accaggctggtgggagaggatgctcctaaaaacaaggatttagtggaatggcttaaatta
catcctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttt
tccccatttcagaagccgaaacaaaaacgacacagatgtcgaaaccctaataaactggat
ataaacaccttgacaggagaagaaagggtacctgttgtaaataagcgaaatggaaagaag
atgggtggagctatggcccctccaatgaaggacttgccaagatggctggaagaaaatcct
gaatttgctgttgctccagattggactgacatcgttaaacagtctggttttgttccagag
tccatgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcagaaga
ggaagaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcatca
acttcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcacaagc
ctccagaacctacagaacctgcagtctctccagctcgcaggcctcatgggcttcccgcca
gggctagcaacagctgctgctgctgggggggatgctaaaaatccagctgccatgttgcct
ctgatgttgccagggatggcaggattgcccaatatgtttggactaagcggattgttgaat
aacccaataacggctactactggaaatgccactactgcttccggtcaaggagagactgag
gatggcgcttcaaaagctgaagagaagaaaaatgagaacgaagaggagaacaaagactct
gagaaaagcacagacactgtttctgctactgactctgcgaatggatctgtcagtgctgct
actgcggcgactaccgccactgccaccactaccaccaccaccaccaacactggattgccc
acaaaccctctggccttcaatcctttcctgctgtctaccatggctcctggcctcttctat
ccatctatgtttctacctccaggactgggaggattgactctgcccggtttcccagcacta
gcaggacttcagaacgcagtgggctccaacgaagagaaggctgctgacaaaactgaagga
actgcctttaaagatgaagaaaatctcgaaggcagtgatgcagaggagagccttgataaa
actgcagattcctccgttttagaagatgaaatagcacagggtgaagaattagactcactt
gatgggggggaagaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
