Rissa tridactyla (black-legged kittiwake): 128908084
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Entry
128908084 CDS
T09443
Symbol
PHRF1
Name
(RefSeq) PHD and RING finger domain-containing protein 1 isoform X1
KO
K17586
PHD and RING finger domain-containing protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtd01009
]
128908084 (PHRF1)
Protein phosphatases and associated proteins [BR:
rtd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128908084 (PHRF1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHD
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_4
zf-RING_5
C1_2
zf-RING_10
PHD_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
128908084
NCBI-ProteinID:
XP_054053616
LinkDB
All DBs
Position
4:complement(20734107..20766152)
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AA seq
1681 aa
AA seq
DB search
MDDDSQDEMINKSAALGKGKRQSLVFLSETESNGGNSCDSEDDTGSEEEEDGTEEEGGEE
DKEESEDEELEDCEDDDEEEEEEEETEAAVGGMTDSLKLEPRINGASISSDEDGENCPIC
LNTFRDQAVGTPENCSHYFCLDCIVEWSKNANSCPVDRILFKYISIRARFGGKILKKIPV
ENTKTQGNDGEDDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLNPPLSEVPVDEWFCPA
CAPMGASAAADTDHVSEEEVAALVADVIPTTSRLRPQVRTRAIARTRQSERVRATVNRNR
ITTAQQIQHVPRYLMSSVLDETIEAVVAGLNTAIYQRPLTPRAPTRQKRKTGRRKKAGGK
KRTQTKSAGKKSSGGQLKRRKRLIKKRRGKKMRVRSHVKNEATARSRIARTLGLSKPVRG
ASLPSMYKPTEPSLGLMRADIGAASLSVFGDPYELDPYESNEEVPANPDSPVSAKRRVLS
QSALRSHRPVARPISVGLPRSSVPALSPDQEAEAAPVPDLLGSILSGQSFLMMSSSDVVI
NRDGSLTAKKAAPLHRKSANDLRVDDGSGHNTQPSTVHSGTTASSSIAGPSVSSGLSTHT
RPSSSSLFSSPSPSLSRTEPAANPAQTTSEKATVKSEYSMTPRSVQTQNIATLSRHGSKL
DDMPRFNGNSKNFAPSDSSSKPLSCNLDSGSKAVTVRQPLKPPPKRIDIFELPRIPKIKK
ETSSKQVEPKPAGSQSCDIPSSCITQLTGKESTNQPGRGSKMESQKSNAKESQQQTRTSG
VSFSTSTGTYSSSSLLGPSRSKGPSSFESFKINIPGNAGHPSRLSNPGFCNTFRPVDDKV
QQKESPSPLFSVKKKQVKSEIYDPFEPTGSDSSSASSSPERLGSGIPLTNITRTISIENP
KVQTFQTVRRFTPYLVENVFGSGADSDVASSNTESHDDVTVKSRIVEQISDTEERDNMDD
EDFLSSPCTSSAVKQISSAECLKEESREGPNVFFNAEELIRPNINVKAEPDSPSENDGQQ
KVQKVEHTERRSRSRSCSNSSSRSKKKMKRKKALVKERKRSRSGSRDRAHSRDRSSRSTS
WSGGEEHSKTHTLKPRSRRSSTDGSSSHERSKKKKMKDKTKDKKAKTSWSRERRKSRSRS
GSPGSTSEFYENRKKKRRSRSRSRRREHSRSNSIERTKRRKHRRDKSYERYDKDSSLRSR
DRKRSRSRSRERRKWRSRSRSASRSREHKSSKSQEKRPRSRSRSKERKHRSKETSLPPPP
EKDQKPPVENVSRCLEQHHSFKQEPKEELVLEELSITIQPNVKLEEVQAETPVQLREVQE
TVKVEPICEEVTSETAFPVPEITNICVPIGNVDSFAETELMRSSNPSVLGSCSNTNLEIT
VKIENTALCPSLVEPPPKKEVMHAPAEAAPIQSSSKSKITDCVKEVKDECLVSNEKTGNF
NKPELEVVPQGPALKSKAPVKRVTWNLQEEESGTLSAGKAPRVPFYKLQRAKEGAWKAED
LNQTLNQVYCQNIPLTPPLPSSLPPYAPVSQPTVQFIMQGSLPALGCMAGQSLTPEPGSL
ATASEPGIQAASVGNAEEKIKAPKPPVDKTKNEEYMKKLHMQERAVEEVKLAIKPFYQKR
EITKEEYKNILRKAVQKICHSKSGEINPMKVANLVKAYVEKYKHMRKHKKSDGEDTREVE
N
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgacagccaggatgaaatgataaacaagagtgctgcactaggcaagggcaaa
agacagagtctcgtgttcctcagtgaaacagaaagcaatggtggaaacagctgtgattca
gaagatgacactggaagtgaggaggaagaagatggcactgaggaagagggaggcgaggag
gacaaggaggaaagtgaagatgaagaattagaagattgcgaagacgatgatgaagaagag
gaagaggaggaagaaactgaggccgctgtggggggaatgactgattctctgaaattagaa
ccacgtataaatggagcaagcatttcctctgatgaggatggtgaaaactgccccatttgc
ctcaacacatttagggatcaggctgttgggactcctgagaactgttcccattacttctgc
ttggactgcatcgtggagtggtctaagaatgcaaactcctgtccagtggatcgaatcctc
tttaagtacattagcattcgggcacgttttggtggtaaaatcttaaaaaagattcctgtt
gagaacacgaaaactcagggtaatgatggagaggatgatccaaccttctgtgaggtgtgt
ggcagaagtgaccgcgaggatcgcctgctgctgtgtgatggctgtgatgcagggtatcac
atggaatgccttaatccacctctcagtgaagtccctgtagatgagtggttctgtccagcc
tgtgcacccatgggtgccagtgctgctgcagatacagatcatgtcagcgaagaagaggtt
gctgccctcgtggctgatgttattcctaccaccagtcgactgcgccctcaagtccgaacc
cgagctatagccagaactcggcagagcgaacgagttagggcaacagtgaacagaaaccgg
ataacaacagcgcaacaaattcagcacgtgccaaggtacctcatgtcctctgttctggat
gaaacaattgaagcagttgtagcaggcctaaacacagccatctaccagcgtcctcttacg
ccgcgggctcctactaggcagaaaagaaaaacaggtaggaggaagaaagcaggaggcaaa
aaaagaactcagacaaaatctgctgggaagaagagttcagggggacagctgaagagacgc
aagcgtctgataaagaagagaaggggcaaaaagatgagagtaaggtcacatgtgaaaaat
gaggctactgctcgctcccgtattgcaagaactcttggtcttagtaaacctgtgcgtggg
gcctcgcttccttccatgtacaaaccaacggagccctcacttggtctgatgagagcagat
atcggtgcagcttctctgtctgtgtttggagatccatatgagttggatccttatgaaagt
aatgaagaggttccagcaaatccagattcaccggtgagtgccaaaaggagagttctctcc
cagtcagcactgaggtctcaccgtcctgtagctagacctatttctgtgggacttcccaga
agcagtgtacctgccttgagtcccgatcaagaagcagaagctgcccctgtgcctgatcta
ttgggaagtatcctgtctggacagagctttctcatgatgagtagttcggatgtggtcatc
aacagagatggttcgctgacagcgaagaaggcagctccacttcacagaaaatcagcgaat
gacttgcgagtggatgatggttcaggacataacacccaaccgagtacagtgcactcaggg
accacagcaagcagctccattgctggaccttcagtttcctctgggctgagtactcacacc
agaccctcctcctcaagcttgttttcatccccttcaccctcgctgagcaggactgagcct
gcagcaaaccctgcacagactacatcagaaaaggcaactgtaaaatcagaatattcaatg
acacccaggtctgttcagactcagaatatagctactctgagcaggcatggctccaagtta
gatgatatgcccagatttaatggaaactctaaaaactttgcacccagtgactcatcttca
aagcctctgagctgtaacttggattctggctcaaaagctgtaactgtgaggcagccatta
aaaccacctcccaagagaattgacatctttgagcttcccaggataccaaagattaaaaag
gaaaccagcagcaagcaggtggagccgaaaccagcaggaagccaaagctgtgacatcccc
agctcctgtataacccagctgactggcaaagagagcactaatcagccgggaaggggtagc
aagatggaaagccagaagtcaaatgccaaggaatctcagcaacaaacccgtacgagtggg
gtgtctttttctaccagtacgggcacgtatagcagttcatcactactgggcccttcgagg
agcaagggcccaagctcttttgagagttttaaaatcaatattcctggaaacgccggacat
cccagcagactgtctaacccaggattttgtaacaccttccgccctgtggatgacaaagtg
caacagaaagagagtccttcacctcttttctcagttaagaaaaagcaggttaaaagtgaa
atatatgatccctttgagccaacaggatcggactcgagttcagcaagcagcagtcctgaa
aggcttggctcagggatcccgctaactaatattaccaggactatttctattgaaaatcca
aaagttcaaacgtttcaaactgtccgtcgtttcactccttacctggtagaaaatgtattt
ggatctggggctgactctgacgtagcatctagtaacacagagtctcatgatgacgtgacg
gtaaaaagcaggattgtggaacagatctctgatacagaggaacgagataatatggatgac
gaagactttctaagcagtccttgcacttcgtctgctgttaagcaaatttctagtgcggag
tgtttgaaggaggaaagcagggagggtcctaatgtgttctttaatgctgaagaattgatt
agacctaatattaatgtgaaagcagaaccagatagtccctcagaaaacgatgggcagcag
aaagtccaaaaggtagaacacacagagcggcgatcgcgttccagatcctgttcaaactcc
agctcccgaagcaagaagaagatgaaaaggaaaaaggcacttgtcaaagagcgtaagaga
tcccggtcagggtctagggacagagcacactcaagggaccgaagctccagatctacctcg
tggtcaggtggagaagagcatagcaaaacacacacattgaaacccaggagcaggaggtct
tctactgatggttctagcagtcacgaacgatccaaaaaaaagaaaatgaaggataaaacc
aaggataaaaaggcaaaaacttcttggtctagggagagaaggaaatctaggtcacgttca
ggtagtcctggaagtacttctgagttttatgaaaataggaaaaagaaaagacggtctcga
tcaagatcaagacggagggaacattcccggtcaaatagcattgagaggactaagaggcgg
aaacacaggagagacaaaagctatgagaggtatgataaagacagtagcttgaggtcaaga
gacagaaagagatcgagatccagatctcgggagaggagaaagtggaggtctcggtctcgg
tccgcatctcgatctcgggaacacaaaagcagcaaatcacaggaaaaaagaccaagatca
agatcgcgttccaaagaaagaaaacacagatcaaaagagacctcacttcctcctccacca
gaaaaggatcaaaagcctccagttgaaaatgtgtccaggtgtctggagcaacaccattcc
ttcaaacaagagccaaaggaggagctagtactagaagagctttccataaccatccaacca
aatgtcaaacttgaggaagtacaggctgagaccccggttcagttgagagaggttcaagaa
actgtaaaggtagagcctatctgtgaggaagtgaccagtgaaactgcattccctgtgcca
gagatcacaaacatttgtgttccaattggcaatgtggattcttttgctgaaaccgaatta
atgagaagtagcaatccatcagtgcttggcagctgtagcaatacaaaccttgagattaca
gttaaaatagaaaatactgcattatgtccatctctggtggaaccacccccaaagaaggaa
gttatgcacgctcccgctgaggctgcaccaattcaaagctcatccaaaagcaaaataacg
gattgtgtgaaggaggtcaaagatgagtgccttgtgtcaaatgagaaaaccggtaatttc
aataagcctgaactagaggtggtacctcagggccctgcgttgaaatcaaaagcaccagtg
aaaagagttacctggaatcttcaagaggaagaaagcggcacgttgtctgctggaaaagct
ccaagggtgccattttacaaacttcagcgagcaaaagaaggggcctggaaagcagaggac
ttgaaccaaacgttaaatcaggtgtactgtcaaaatatacctttgacgccacctctgccc
tcaagcctccccccctatgcccccgtcagccagcccacggttcagtttatcatgcagggt
agtcttccagcgcttggctgcatggcgggacagagcctgactccggagccaggcagcctg
gccaccgcatccgaaccaggaatccaagctgcttctgttggaaatgcggaagaaaagatt
aaagcacccaaacctccagtggataaaacgaagaacgaggaatacatgaagaagcttcac
atgcaggaaagggctgtggaagaagtgaaacttgctattaaacctttttaccagaagagg
gagattacaaaggaggagtacaagaacattcttcggaaagcagtgcaaaagatctgccac
agcaaaagtggagagatcaaccccatgaaggtagctaatctggtgaaggcatacgtggaa
aaatacaaacacatgaggaaacataagaaatccgatggtgaagatacccgtgaagtggaa
aattga
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