Rissa tridactyla (black-legged kittiwake): 128911247
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Entry
128911247 CDS
T09443
Symbol
SORCS3
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128911247 (SORCS3)
Membrane trafficking [BR:
rtd04131
]
Endocytosis
Others
Others
128911247 (SORCS3)
Endosome - Lysosome transport
128911247 (SORCS3)
Endosome - Golgi transport
128911247 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
128911247
NCBI-ProteinID:
XP_054061760
LinkDB
All DBs
Position
6:60172740..60476712
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AA seq
1214 aa
AA seq
DB search
MEKGTNCFPTCHTVFLAWTWLLLLCWCCTGAEITCRPCSSPSPSWPSSSSRLRQEQRQPP
PLPGGLRSWPGGRTRGSAGAAAAAEPLPGGEPGGRAGPRGATLRSAGAGGGAPGGRGPAA
ARSRRSSEGRRALPAGGGRGLPAAEGQRGGGRAQPRGPPEEGRAPRLRGAEELRLSSTTF
ALTGDAAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEKLNDKVG
LKTVLSYLYVSPTNKRKIMLLSDPEIESSILISSDEGATYQKYRLNFYIQSLLFHPKQEE
WILAYSLDQKLYSSMDFGRKWQLMHEQVTPNRFYWSVTGLDKEPDLVHMEAQTADGHTHY
LTCRIQECSETKRSGPFSRSIDISSLVVQDEYIFIQVTAGGRANYYVSYRREPFAQIKLP
KYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSRGLEGNI
IIDLYEVAGIKGIFLANRKIDDQIKTFITYNKGRDWRLLQAPDTDLRGDPVVCQMPFCSL
HLHLQLSANPYTSGSISSKETAPGLLVATGNIGSELSYTDVGVFISSDGGNSWRQIFEEE
YNVWFLDWGGALVAMKHTSVPIRHMWVSFDEGRSWSKYSFTSTPLFVDGSLVDPGIETQI
MTVFGHFSLRSEWQLVKVDYKSLFSRRCNKDDYQTWHLHNQGEPCVMGERKIYKKRKPGA
QCSLGRDYSQSVVSEPCVCGQGDFECDYGYERHSNNQCVPAFWFSPSSLSKDCSIGQNYL
NSTGYRRIVSNNCTDGLRERYMAKMEKCPGKAPRGLHILTTDGKLVTEQGHNATFIILME
EGDLQRTNIQLDFGDGIAVSYANFSPVEDGIRHVYKSAGIFQVTAYAENSLGSDTAVLFL
HVVCPVEHVHLSVPFVAIRNKDVNITAVVWPSQAGTLTYFWWFGNSTKPLITLESSISYT
FAVEGMNTVTVQVAAGSTLIQDTKEVAVHEYFQSQLLSFSPNLDYHNPDIPEWRQDVGKV
IKRALAQVTGIPDEQILVAVFPGLPTSAELFILPHKNTTERRKSSEADLEQVVEILFNAL
NQNLVQFELKPGVEVIVYVTQLTLAPLVDSSTGHSSSAMLMLLSVCLXAWLSFLIYKFKR
KIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSEFTDPEELMDKELDTRVMGSISTIA
NSESTKEIPNCTSV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggactaactgctttccgacctgccacaccgtttttctcgcctggacatgg
ctcttacttctctgttggtgttgcaccggcgccgaaataacttgcagaccctgctcgtct
ccatcgccctcctggccgtcctcctcgtctcgccttaggcaggagcagcgacagccaccg
ccgctgccgggaggattacggagctggccgggcggccgaacgcggggctcggccggggcg
gcggccgccgcggagccgctgccgggcggggagccggggggccgtgcggggccgcgggga
gcgacgctccgttcggcgggggcgggcggcggcgcgcccgggggccggggcccggcggca
gcgcggagccggaggagcagcgaggggcggcgggcgctgccggcgggcggcggccggggg
ttgcccgcggccgaggggcagcgcggcggcggccgggctcagccccgcgggccgccggaa
gaggggagagcgccgcggctgcgaggggcagaggagctgaggctgagcagcaccaccttc
gcgctcacgggggatgcggcgcacaaccaagccatggtgcactggtccgggcacaacagc
agcgtgattctcattctgacaaagctgtatgacttcaacttgggaagtgttacggagagc
tcactgtggaggtcaacagactatgggactacctatgaaaagctaaatgacaaagtaggc
ctgaagactgtgctgagctacctttacgtcagtcccactaacaagaggaagatcatgctt
cttagtgatccagagatcgagagcagcatcctcatcagctctgatgaaggggctacctac
cagaagtaccgtctgaacttctatatccagagcttgctcttccaccccaagcaggaggag
tggatcttggcctacagtctggatcaaaagctgtacagctccatggactttggaagaaaa
tggcagctcatgcatgagcaggtcactccaaacaggttttactggtcggtgaccggtttg
gataaagaacctgacctcgtgcacatggaagcccagacagctgatggacacacccactat
ttgacctgtcggatccaggagtgctcggagaccaaaaggagtgggccattttcgcgctcc
attgacatcagctcccttgttgttcaggatgaatatatcttcatccaggtgacagctggt
ggaagagcaaactactatgtgtcgtacagacgggagccttttgcacagattaaattgccc
aaatactctcttcctaaggacatgcatattatcagcacagatgagaatcaggtgtttgca
gctgttcaagagtggaaccagaacgatacgtacaacctgtatatctcggacacccgaggg
gtgtacttcaccctggccttggaaaacgtgaaaagcagtcgaggactggaggggaatatc
atcattgacctttatgaggtagcagggatcaaaggcatattcctggctaacaggaagata
gatgaccaaatcaagactttcattacctacaacaagggcagagactggcgtttgctgcag
gctccggacactgatctaagaggggatcctgtagtttgccagatgcccttttgctcattg
cacttacatctgcaactctcagcaaatccatacacttcaggaagcatttccagcaaagag
acagctcctgggctgctggtggcaacaggcaatattggctctgagctttcctacactgat
gttggcgtgttcatctcttctgatggtggaaattcctggaggcagatcttcgaggaggaa
tacaatgtgtggtttctggactggggaggggcgctagtggccatgaagcacacgtcagtg
cccatccggcacatgtgggtgagttttgatgaaggaagatcctggagtaaatacagtttc
acatcaacaccactttttgtggatggatcccttgtggaccctggtatagagacccagata
atgacagtttttgggcacttcagtctccgttctgaatggcagctggtcaaagtggactac
aagtctctcttcagtcgaaggtgtaacaaagatgactaccaaacctggcatctgcacaat
cagggggagccttgtgtcatgggagagaggaagatctataaaaaacgcaagcctggagcc
cagtgctccctaggtcgggactattcccaaagtgtggtgtctgaaccatgtgtctgcggt
caaggggactttgagtgtgactatgggtatgagaggcacagcaacaaccagtgtgtccca
gccttctggttcagcccgtcctccctgtccaaggattgcagcattggtcagaactacttg
aacagcactgggtaccgaaggattgtgtctaacaactgcacagatggcttgagagagagg
tacatggccaagatggagaaatgccctggaaaagcaccccgaggactgcacatcctcact
actgatggaaaattggtcacagagcagggacacaacgccaccttcatcatccttatggaa
gagggtgatctccaaaggacaaacattcagcttgattttggagacggcattgcagtatcc
tatgctaatttcagccctgttgaggatggcatccgccacgtgtataagagtgctggaatc
tttcaggtgacagcatatgcagagaacagcctgggctctgacactgctgtcctcttcctg
catgtggtctgtccagtggagcacgtccatctgagtgtcccctttgttgccatcagaaac
aaagacgtcaacattactgcagtagtttggcccagccaggcaggcacacttacctacttc
tggtggtttggtaacagcaccaagcccctcatcaccctggagagcagcatctcgtacacc
ttcgctgtggaggggatgaacaccgtcactgtgcaggtcgctgcgggcagtaccctcatc
caggacaccaaggaggtcgcagtgcacgagtatttccaatctcagctcctctcgttttct
cccaacttggactaccataaccctgacatccctgaatggagacaagacgttggcaaagtc
atcaagagagctctagcgcaggtgaccggtatccctgatgaacagatcttggtagctgta
tttcctgggcttcctacttctgctgaactcttcatactgccccataaaaacacaacagag
aggaggaaaagcagcgaggctgatctggagcaagtggtagaaatcctgtttaatgctctc
aaccagaacctggtccagtttgaactgaagcctggtgttgaagtcattgtgtatgttact
cagttaacattagcaccccttgtcgattccagcacgggtcacagcagttcagcaatgctg
atgttgttgtctgtgtgtttgtaggcttggctgtcttttttaatctacaaattcaagagg
aaaatcccttggattaacatctatgcccaagttcagcatgacaaggagcaggaaatgatt
ggctctgtcagccaaagtgaaaacgcccccaaaatcactctaagcgagttcacggaccct
gaggagctgatggacaaagagctggacacacgagtgatgggaagcatctcaacaattgcc
aacagtgaaagcacaaaggaaatccccaactgcactagtgtttaa
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