Rissa tridactyla (black-legged kittiwake): 128913941
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Entry
128913941 CDS
T09443
Name
(RefSeq) vitellogenin-1-like
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vitellogenin_N
Vit_open_b-sht
Vit_b-sht_shell
VWD
Motif
Other DBs
NCBI-GeneID:
128913941
NCBI-ProteinID:
XP_054068312
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All DBs
Position
8:41828039..41870889
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AA seq
1904 aa
AA seq
DB search
MRGLILALVLTLVGSQHLNYQPDFSENKVYTFNYESVLLSGLPEKGLARAGIRIKSKVEI
SGIGPKLCLIRIHSIEAAEYNGVWPTTSFSRSLKLTQVLTGQLSTPIKFEYSNGHVGNVM
APDSVSDDGLNIYRGILNVLELSIKKMQHSYSLQEAGIGGICNTTYAIQENKRANSVYVT
KSKDLNSCEEKVQMATGSAYTHPCQTCQQRNKNSRATATYNYKIKYTRNEAVITQADVEE
IHQFAPFNEITGGNAIVEARQKLALTDVQKQMAEVPPKEFQNRGSLQYQFGSELLQLPVH
LFRIKNVESQIEESLQDLVETTSEQLPSDAPAKALKLLHLFRAANEENYESVWKQFSSRP
AYRRYILDIIPAVASHRALRFLRHKMERQELTNWEAAQTVLVALHSSTPTQDVMEEATLI
VKKHCPRSSTVLGKVCHLSYASLCHKQCSSSDSCSECLQLLHGFAGEALSKSNTEEISLA
LKALGNVGHPASIKHIKKFLPGYAAGASDLPLKVHATAVMALKNIGMKDPKMVQAITLEI
FLNQKIHPRVRMLAAVVLLETKPSLPILMTLADAVLKEPSMQVASFIYSHLRALGRSTAP
DLQVMASACRMAIRVLSPKFDRSGYQFSKVFRFSMFKEFLMSGLAAKYLVLNNAGSLIPT
MAMSQLRTHFLGKVADPVEVGITVEGLQEMFAKGYSPDRDWETDYNFKEILKTLSDWKAF
SSDKPFASGYLKMFGQELFFGGLDKNAIQNALQAWYGPDEKIPSIRRIISSLQSGVGRQW
TKALLSSEIRHIVPTCTGFPMETSFYYSSVTKVAGNVQAQITPSPKSDFRLTELLNANIR
LRSKTSLSMAKEMTFVMGINTRMIQAGLEAHTKMNAHVPVNVVATALMKEKNIKIEIPPC
KDETNIITVRSKTFAVTRNIGDLAASKMTPVLLPEAVPDIMKMSFDSDSASGETDNIRHR
QSAEDVSAGNSVSFGYSSSRKEPFFQSVCSNASTFGVQVCIERKSVHAAFIKNVPLYYLV
GEHALRMSFKPVYAEAPIEKIQVTIQAGDQAPTKMVRLVTFEDPAAQVSSSKEAIKRVKK
ILDDAGDQGTRKSRSSSSSASSSNGSAESTTSSPSSSDSDSRASQGGTQINLKAKRSKAK
GKKFYPFGDSGSSSSSSSSSSSSGGSGSKSSSSSGKSSSSSGKSSSSSSSSSSKSSSSKS
SSSSSSSSSSSSSSSSSSSSSSKDSSSSSSSSSSTGSSSSSSKASGVKHKAKKQSKTTSF
PHASAAEGERSVREQKRKTQSSSSSSRSTSSGTSSSSESVGASHRHSKYDRRAEPKHVNS
QFNSHSGYDVSAEWEYHLPKVYRLRFRSAHVHRHPDRKISSSSSSSSSESGSSHSNSSSS
VSSSRSSSSHHRHGENPGHSSRRSHVSRGVGTHHSHGSSQRRERNFLGDIIPPGITIVAQ
AVRSDNRNQGYQATAYVRSDAAKVDVQLVVVQLAETNWKACADAVILPLKAQARLRWGKE
CRDYRIAAMATTGQLAKKPAVQLKVQWGNLPSWIKKTSTVFMQYVPGAALVLGFSEAHQR
NPSHEFIVRAAATSPRTIDTVIKAPGVTLYYQALRMPFTLPLGPSPTYEIRDITAWNVFP
EIASQIAQEDQSTCEVSERDFKTFDHVSRTYSFNKSCNLIVAQDCTEHPKFMITTRKVDP
QSFSRQVHINTTSANITICPTADSSLHVACNEEPVLSHSGVSEYEKGDVKIYKNGTTVIV
EAPTHGLKRVTFDGVILKVTVASWMRGKTCGVCGNNDREKHNELLMPNHKLAHSCSAFVH
SWVLLEETCSGGCKLQRSYVKLNRNPTIDGEESTCYSVDPVLKCMKDCTPIEKTSVKVGF
HCFPKDTAVSLLEWQRSSDKKSASEDVVESVDTDIDCTCTGDCS
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcttgatattagccctggtgttaaccctggtggggagccagcatcttaattac
caacccgacttcagtgaaaacaaggtttatacatttaattatgaaagcgtgcttctcagt
ggacttccagagaaaggacttgcaagagctggaataagaataaaaagtaaagtggaaatt
agtggtattgggccaaagctttgtcttattaggattcactcaatcgaggcagcagagtac
aatggcgtctggcccacgacctcgttctctcgatcactcaaactgacccaggtactaacc
gggcaacttagtactcccatcaagtttgagtatagcaatggccacgttggaaacgttatg
gctcctgattctgtctcggatgatggtctgaacatctacagagggattctgaacgtgctg
gagctaagcataaagaagatgcagcattcatacagcttgcaggaggctgggatcggaggt
atttgcaatacaacgtatgcaatccaggaaaacaagagagcaaactcagtctatgtgacc
aaatccaaggacctgaacagttgtgaagagaaagttcaaatggccacaggttcagcatac
actcatccgtgccagacctgccagcagagaaacaagaattcccgggcaactgctacttac
aattacaaaattaaatatacacgtaatgaagctgtaattacacaagctgatgttgaggaa
atccaccagtttgcgcccttcaacgagataacaggaggaaatgctatagtagaagcaagg
cagaaacttgctttgactgacgtgcaaaagcaaatggctgaggtcccaccaaaagaattc
cagaatcgtgggtcacttcagtaccagtttggcagtgaattgcttcagcttcctgtccac
ttattcagaataaaaaatgtggaaagccagatagaggaaagtctgcaagacctagtagag
accacatctgaacagcttcccagtgatgcaccagcaaaagccctcaagcttttgcacctc
ttccgtgcagcaaacgaggagaattacgagtcagtgtggaagcagttctccagtcggcca
gcgtacaggcgctacattttggatataattcctgcagttgccagtcaccgtgcactgagg
ttcttgaggcataaaatggaaaggcaagaactcaccaactgggaagcagctcagacggtg
cttgtggctctgcactcaagcacgccaactcaggacgtgatggaggaagcaacactcatc
gtgaaaaaacattgcccacgctcaagtactgtacttggaaaggtttgccatctcagctac
gcatcactgtgccacaaacagtgctcttcatcagactcctgctctgaatgtctccagtta
cttcatggctttgcaggagaggcactgagcaagtctaacacagaagaaatttccctggct
ttgaaggcccttgggaatgtaggacatccagccagcatcaagcacatcaagaaatttttg
ccgggatatgcagctggtgcctcagacctgccactcaaggtccatgcgactgccgtgatg
gccctgaaaaacataggcatgaaagacccaaaaatggtccaggctattacccttgagatt
ttcctgaatcaaaaaatccatcctcgggtccgaatgctagctgcagtggttttgcttgaa
accaagccaagccttccaatactgatgacattagctgatgcagtgctgaaggaacctagc
atgcaagtggcaagtttcatctactctcacctgagggccctgggtagaagcacagctcca
gatcttcaagtgatggcttctgcctgcagaatggctatcagagtattaagccccaaattc
gacaggtctggatatcagttcagcaaagttttccgcttcagtatgtttaaagagttcctt
atgagtggactggcagctaaatatttggtattgaataatgcaggcagcttaattccaaca
atggcaatgtcccagctgcggacgcatttccttggaaaagtggctgatcccgtggaggtg
ggaataacggttgaaggactgcaagagatgtttgctaaaggttactcccctgacagggac
tgggagactgactataacttcaaggaaatcctgaaaacgctctctgactggaaggcattc
tccagtgacaaaccatttgcatcaggctacttgaagatgtttggccaagagttgttcttt
ggtggacttgataaaaacgccatccaaaatgcattgcaggcatggtatggacctgatgaa
aaaatcccttcgataaggagaataatcagtagccttcaaagtggtgtagggaggcagtgg
accaaggctttgctgtcctctgagatccgtcatattgtgcctacctgcacggggttccca
atggagaccagcttctattactcttctgtcactaaagttgcaggaaatgttcaagctcag
attacaccttctccaaagtctgatttcagattgactgagttactgaatgccaacattagg
ctgcgatccaaaacgagtctaagcatggctaaggagatgacctttgtaatggggatcaac
acacgcatgatccaggcagggctggaagcacacaccaaaatgaacgctcatgtacctgtg
aatgttgttgccactgcccttatgaaggaaaaaaatatcaaaattgaaattccaccctgt
aaagatgagactaacataattacagtaaggtctaagacattcgctgttacacgaaatatt
ggggatttggctgctagtaagatgactccggttcttctacctgaagcagtgcctgacata
atgaagatgtccttcgattcagattctgcatcaggcgagactgataacatcaggcacaga
cagtctgcagaagatgtttcagcgggaaattccgtttcctttggatattcttcttcccgg
aaagagccatttttccagtctgtgtgctccaatgcaagtacatttggggttcaagtgtgc
attgagaggaaaagcgtacatgcagcatttatcaaaaatgttcctctttactacctagtt
ggagagcacgcccttagaatgagcttcaagccagtttacgcagaggcacctattgaaaaa
atacaagtcacaattcaagcaggagaccaagctcctacgaaaatggtacgtttagtaacg
tttgaagatccagcggcacaagtatcttccagcaaagaagcaattaaaagagtgaagaaa
atacttgatgatgctggtgaccaggggacaagaaaatccagaagctcatcgtccagtgcc
agcagcagcaatggaagtgccgagagtacaacgagcagcccctccagcagcgactccgac
agcagagcatcacagggaggcacccagataaatctgaaagcaaaacggtccaaagccaaa
ggaaagaaattctacccctttggggacagtggcagtagtagcagcagcagtagcagcagc
agcagtagtggtggcagtggcagcaaaagcagcagtagtagtggcaaaagcagcagtagt
agtggcaaaagcagtagtagtagcagcagcagtagcagcaaaagcagcagtagcaaaagc
agcagcagcagcagcagtagtagcagcagcagcagtagtagcagcagcagcagtagtagc
agcagcaaggacagcagcagtagcagcagtagcagcagcagcacaggtagcagcagcagc
agtagcaaagcatctggtgtaaagcataaggctaagaagcagtccaagaccacatcattt
ccacatgccagcgctgctgaaggcgagagaagtgtccgtgagcagaaacgtaaaacacag
agtagcagcagtagcagcagaagcaccagcagtggcaccagcagcagcagtgaaagcgtt
ggtgcttcccatcgccacagcaaatacgacagacgagctgagccgaaacatgtcaattcc
caatttaacagtcacagtggttacgacgtttctgcagaatgggaatatcaccttccaaaa
gtataccggctccgcttcaggtctgctcacgtccatcggcatccggatcggaagatatca
agcagctcatcctcatcttcctctgagtcgggaagcagccacagcaacagcagcagcagt
gtcagcagcagcaggagcagcagtagccaccaccgtcatggagaaaaccctggccacagc
tcaaggaggagccacgtgagcagaggagtcggcacccaccacagccacggctccagccag
aggcgcgagcgcaacttcctgggagacataattccacctggcattacgattgtggcacag
gcagtaaggagtgacaacagaaatcaaggttatcaagctacagcatatgttcgttctgat
gctgccaaagttgatgtgcaactagttgtggttcagctggctgaaaccaattggaaagca
tgtgctgacgctgtaatactgcctctgaaagcacaggccagactgaggtggggcaaggag
tgccgggactacaggatagcagccatggctaccacaggccaactggcaaagaagccagcc
gtgcagctgaaggtgcaatggggaaaccttccatcctggataaaaaagacaagcacagta
ttcatgcagtacgttcctggtgcagcacttgtgttgggcttctcagaagcacatcagaga
aatccatctcatgaatttatagtaagggcagctgcaacatctccacgtacaattgacaca
gtaattaaagctcctggggtaacgctttactatcaggcactccgaatgccattcactctg
cccttaggcccatctccaacttacgagattcgagatatcactgcctggaatgtatttcct
gaaatagcttcgcaaatagcacaagaagatcaatccacatgcgaagtcagcgagagagat
ttcaaaacattcgatcacgtgagccgtacatattctttcaataaaagctgcaacctcata
gtggcccaggactgtacagaacacccaaagttcatgattactaccagaaaggttgatcct
cagtctttctcaagacaggttcacataaatacaacctcagcaaacatcacaatctgtcct
accgcagattcatctcttcatgtagcatgcaatgaagaaccagttctgtcgcacagtgga
gtttctgagtatgaaaaaggcgatgttaaaatttataaaaatggaacaacagttatcgtg
gaagctccaacacatggactgaagagagtgacttttgatggtgtgatccttaaggttact
gttgcttcatggatgagaggaaagacctgtggagtttgcggaaataatgacagagaaaag
cacaatgaactcctcatgccaaatcataagctggcacacagctgttccgcttttgttcat
tcatgggtgttgctagaagaaacctgctctggtgggtgcaagctgcagcgcagttatgtg
aagctgaatcgaaatcctactattgatggagaggaatctacgtgctactctgttgaccca
gtactgaaatgtatgaaagactgtactccaatcgaaaaaacttcagttaaggttggcttt
cactgtttcccaaaagatactgctgtaagcctgctggaatggcagagaagcagcgacaag
aaatctgcatctgaggacgtcgtggagtctgtggatactgacattgattgtacctgcact
ggcgactgtagttaa
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