Rissa tridactyla (black-legged kittiwake): 128915475
Help
Entry
128915475 CDS
T09443
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128915475 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128915475 (MBD4)
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128915475 (MBD4)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
128915475 (MBD4)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128915475 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
128915475
NCBI-ProteinID:
XP_054071796
LinkDB
All DBs
Position
10:complement(16228419..16233410)
Genome browser
AA seq
488 aa
AA seq
DB search
MAAAEWGQGGGGGGPGRRAGRSGGCVLSPEGSKRRSKSACVEYFRKTGKMMLKADFDVPA
RCQRSTRSRVKRCSTKARTVSENEDCHSQVQGLSMQNGEEDRIQNIQTGNEHLEDITPTL
ESKDLIMKGINPEDCLKTRKKGAGGKGAQNKKTGKSSEKRNRDSTQNKRQRRACNKQETE
GIQNKKFCGQRDVCVADSRGVADQNADPVGLGRTLLRVSRLRSGTELRSAAARSQRQLES
RAGGKCVETSSDDASSAKSEEKTNGLKVGKEVDQGNSGNHDFKSDTEMDANVLQLCDKKS
FTAVKMPPEESIPQTQVDRRKTSPYFSSKYSKEAPSPPRRKAFRKWTPPRSPFNLVQETL
FHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEITRTADWKEMSELLRPLGLYELR
AKTIIRFSDEYLSKRWKYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHAWLWE
NRERLSID
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgagtggggccagggcggcggtggcggcgggccgggccgcagggcgggg
aggagtggcgggtgcgtcctcagtcctgaaggaagtaagagaagatcgaaaagtgcatgt
gtggagtattttcggaaaactgggaagatgatgctaaaagcagattttgatgtcccagct
cgttgccagaggagtacccgttcgagggtgaaaagatgcagtacaaaagcgagaactgtt
tcagagaatgaagattgtcacagtcaagtgcaaggcctcagtatgcaaaatggtgaagag
gacagaattcaaaacattcagactggaaatgaacacctggaagacattacacccactctg
gaaagcaaagatttgatcatgaaaggcataaacccggaggactgtttgaaaaccaggaaa
aagggggcaggtgggaagggtgctcagaataagaaaactggaaagagctcagaaaagagg
aatcgagacagtacccaaaacaaaagacagagaagagcgtgtaacaaacaggaaactgag
ggcattcaaaacaagaaattctgtggacagagagacgtgtgtgtcgctgatagtcggggt
gtagctgatcagaatgcagaccctgtgggcctgggaagaactctgttaagggtttccagg
ttgcggtcaggcacagagctgaggtcagcggcagctcgctcacaaaggcagctggagagc
agagcaggggggaagtgtgtggagacaagttctgatgatgcgtcttctgcaaaatctgag
gagaaaaccaatggattgaaagtagggaaagaggtggatcaagggaattcaggtaaccat
gattttaaatctgacactgaaatggatgctaacgtcctgcagctgtgtgacaagaaaagc
ttcacagcagttaaaatgccaccagaagagtctatcccacaaacacaagtggataggagg
aaaacgagtccatatttttcaagtaaatacagtaaagaagctcccagcccacccagaagg
aaggccttcagaaaatggactccaccacgttctccttttaatctggtccaagaaacactt
ttccatgatccgtggaaacttcttattgcaaccatatttctcaataaaacttcaggtaaa
atggcaattcctgtgctctgggagttccttaagaagtatccttctcctgaaataaccagg
actgcagactggaaagaaatgtcagagctgctcagacctcttggcctctacgaactcaga
gcaaaaacgatcatcaggttctcagatgagtacctgagcaagcggtggaagtaccccatc
gagctgcacggcatcggcaagtacgggaacgactcctacaggatcttctgcgtcaacgaa
tggaaggaggtgcagccgcaggaccacaagttaaacgtgtaccacgcgtggctctgggag
aaccgggagaggctgagcatcgactga
DBGET
integrated database retrieval system
