Rissa tridactyla (black-legged kittiwake): 128915983
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Entry
128915983 CDS
T09443
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128915983 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128915983 (RBM22)
Spliceosome [BR:
rtd03041
]
Complex B
Other components
Prp19-related factors
128915983 (RBM22)
Complex C
128915983 (RBM22)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
128915983
NCBI-ProteinID:
XP_054073007
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All DBs
Position
11:4199570..4207049
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AA seq
420 aa
AA seq
DB search
MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREISNSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcgctgggttccaacacctacaaccggcagaactgggaagacgcggatttc
cctattctgtgccagacgtgtcttggagaaaacccatatattcgaatgaccaaagaaaaa
tatgggaaagaatgcaagatttgtgccaggcctttcacagtatttcgctggtgccctggt
gttcgtatgcgtttcaagaaaacagaagtatgtcagacatgcagcaagctgaagaacgtc
tgtcagacctgcctgcttgacctggaatatggtttgcctattcaagttcgggatgcagga
ctctcccttaaggatgaaatgccgaagtctgatgtcaataaagagtactacactcagaac
atggaacgagagatatccaattctgatggcaccagaccagttggtgcactgggaaaagct
acttccaccagtgacatgctgctgaagctggctcggaccactccttactataaacgcaac
cgtcctcacatctgttccttctgggtgaaaggagaatgcaagagaggagaagagtgtccc
tacagacacgagaaacctacagatccagatgatccgctggctgatcagaacatcaaagat
cgttactatggaattaacgatcctgtggctgataaacttctgaagcgagcgtcaaccatg
cctcgtctagacccccccgacgacaagactattactacactgtatgttggagggcttgga
gatactatcactgaatcagatctcagaaatcacttctaccagttcggggagattcggaca
ataactgtagtgcagaggcaacagtgtgctttcatccagtttgccacccggcaagctgcg
gaagtggctgctgagaaatccttcaacaaactcattgtcaatggtcgcaggctcaatgtc
aaatggggaaggtcccaggcagcaagaggaaaagaaaaggacaaggaaggtactacagaa
tctgggataaagctggagccagttccaggacttcctggagctctcccccctcctccagct
gcagaagaggaggcttctgcaaattacttcaacctacctccaagtggccctccagccgtg
gttaacattgccttgccacctcctcctggcattgctccgccaccgcctccaggtttcgga
ccacacatgttccacgccatggggcccccgcctcccttcatgagagccccgggccccatt
cactacccgtctcaagatccccagaggatgggtgcccacgcgggaaagcacagcagcccc
tag
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