Rissa tridactyla (black-legged kittiwake): 128917164
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Entry
128917164 CDS
T09443
Symbol
SETD1B
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00310
Lysine degradation
rtd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128917164 (SETD1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128917164 (SETD1B)
Enzymes [BR:
rtd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
128917164 (SETD1B)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128917164 (SETD1B)
HMT complexes
COMPASS/SET1 complex
128917164 (SETD1B)
COMPASS/SET1 complex (yeast)
128917164 (SETD1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
128917164
NCBI-ProteinID:
XP_054075785
LinkDB
All DBs
Position
13:complement(5076203..5131729)
Genome browser
AA seq
2003 aa
AA seq
DB search
MSFREIKAGEKAKHPEDHGKKQSSSWINGMENSTQASTSVEKRNHHWRSYKLIIDPALKK
GQHKLYRYDGQHFSMPNSGIAPVDCVRDPRIGRIWTKTKELELSVPKFKIDEFYVGPVPP
KQVTFAKLNDNIRENFLTDMCKKYGEVEEVEILYNPKNKKHLGIAKVIFATVKGAREAVQ
HLHNTSVMGNIIHVELDTKGETRMRFYELLVNGLYTPQTLPVGTEQDVSPTVNETLQLTD
SLKRLKDSNLSSAGSSVTPNSSTPFSHDTAYSSCRQDTPNSYSQFTPQSQGTPHTPRLGT
PFSQDSTYSSRQTTPVYHFGQDSGYKPRRHETKFTDAYNRRPGHHYVHNSAGVYRGTEHQ
FSTYKSHQQEPVQFSHTPPLSHSGSSSYKSAFSPYQAPSVFPQSDDQQFPQTSRETEYRR
PAPPPTEMVVESSAATNIDFVPVKEKQEEPPPLPDSNSVPEPSTASFSQTPERSETPGTP
TMESEMQHNSLDSRIEMLLKEQRTKLPFLNEHDSDNEIRMEGSPISSSSSQLSPIPMYGS
NSQPGYRGQTPSSRPSSTGLEDISPTPLPDSDDDEPIPGTTSLSQNSRGTSEASMTPIDQ
LSRTSKIETSEAKEMVPGDQTPTSEKMDEGQHSSGEDMEISDDETNPAPITSAECAKTIV
VNSSVSNTAVMAPSIPPMPPPGFPPLPPPPPPQPGFPMPPPLPPPPPPTHPAVTVPPPPL
PAPPGVPPPHILPPLPPFHPGMFPVMQVDMISVLGNQWGGMPMSFQMQTQMLSRMMQAQN
TYQYPPFMTGRMQFVNLPPYRPFSMGAALGRGQQWPPLPKFDPSVPPPGYEPKKEDPHKA
TVDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDDWWDKKERLAKASLTPVKSGGELEE
KPKPKDRIASCLLENWNKGEGLGYEGIGLGIGLRGAIRLPSFKVKRKEPPEAASAGDQKR
IRPSTSVDDEDEESERDRDASDTTSDLSKKDAEAVGLRRRPARPLELDSEGEEGDETSGK
EEESSSEKEEEQEEEGGLVKGAPGKEEDEDEEEDEDEDEDEEEDEDEDEDDEETGIDTSD
KEEEQDSEEDVASPSSSKAEVESSDESEDSSEFESSSDSDDEDEDEDEEEEEEEEEEEVT
EDQDREAMVAETDHEPAGHELPDDERETILELYPVDDYMDTTGLGLTEPALAVKDEGMEE
IKAGESECGEVPEARIAAETLKHLVMERDQETKLALSPICRPEEESEPATMLEPEVQEGP
KPESQDEEETLCLLTPVGVFGEPLPNKSFFSKSDDSSLEARVKTKLPSVAEEDDRLPRTP
GREVMIHSETDTLLLPAHKVPSSMLPLPSTPGKEESLVPPEKFPEQLMVTKTSVEEEIPR
TPGRDILAKSSHPLVKSQSTDTVPATPGSDAPLTGSSLTLSSPQVPGSPFSYPSQSPGIN
SGIPRTPGRDFNFTPTFPEAGATIPCLLSGKKQSEDELDEKPFKEPLCASLTISMNSVPS
PIPFASPPQADFHTDMGLPHDEPIPVTALPCMHGDGRMPIEECKAEVKSVLLSSEVPAGA
SILPPPPPPSVLPKRRPGRPKRSPPSVLSLDVYSGKTIEPPPVPVALVESAVGKELLSGH
PDAFYGLKDPEAVTLDFRNDGFHEKIAAETVAEKLPFKELENQWNEDFKEEEAHVKPKRQ
WRRQKKTPEDLPMIPSPEYSPPRPQFRPRSEFEEMTILYDIWNGGIDEEDIKFMCITYDR
LLQQDNGMDWLNDTLWVFHPSTSFSTPKKKKRDDGMREHVTGCARSEGYYKIDKKDKLKY
LNNSRAFAEEPPADTQGMSIPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLK
FRKKKLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYM
FRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDY
KFPIEDVKIPCLCGSENCRGTLN
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccgagagatcaaggcgggggaaaaagccaagcaccctgaagatcatggcaaa
aagcagagttcaagttggatcaacggaatggagaacagcacgcaagccagcacttctgtc
gagaaaagaaatcaccattggagaagttacaagttgattattgacccggctctgaaaaaa
ggacagcacaaactctaccgttacgatgggcaacatttcagcatgccgaactcgggaatc
gctcctgtggattgtgtcagggatcccagaatagggcgaatatggaccaaaactaaggag
ttggagctgtctgtccccaaattcaagattgatgaattttacgtggggccagtgcctccc
aagcaggtcacctttgccaagctgaacgacaacatccgtgaaaactttttgaccgacatg
tgcaagaaatacggcgaagtggaagaggtggagattctctacaaccccaagaacaagaag
cacctgggcatcgccaaagtgatctttgccaccgtcaagggtgcccgggaggccgtccag
caccttcacaacacctctgtcatgggcaacatcatccacgtggagctggatacgaaaggt
gaaacccgcatgcgattctatgagctgctcgttaatggtctttacactcctcagaccctt
cctgtaggcactgaacaggatgtatcgccaactgtgaatgaaactctccagttgacggat
tccctgaagcgcctgaaagacagtaacctttcttctgcgggatcatctgttaccccaaac
agtagcacgcctttttcccatgacacagcctattccagctgtcggcaagataccccaaac
tcttacagccaatttaccccacagtcccaaggaacacctcacaccccacgtttagggacg
ccgttttcccaggattccacctattctagtcgtcagacaacgcctgtgtaccattttgga
caggacagtgggtacaaacctaggagacatgaaacaaaatttacagatgcctacaaccgt
cgaccaggacatcactatgttcataactcagcaggtgtttaccgagggacagagcatcag
tttagtacgtacaaatcccatcagcaggagccagttcagttctctcacactcctcccctg
agccactctggctcttcgagctacaaatctgccttctctccctaccaagcaccatctgta
tttccccaatctgatgatcagcaatttccccaaacttccagggaaacagagtaccggaga
cctgcgccacctcccactgagatggttgtggaaagcagtgctgccactaacattgatttt
gtcccggtgaaggagaaacaggaggagcctccccccttgcccgattcgaactctgttcct
gaaccgagcacagcatccttctctcagactccagagagaagcgagacccctggcaccccc
accatggagtcagaaatgcagcataacagtttagactcaaggattgagatgctcttaaaa
gagcagagaacaaagttaccctttcttaacgagcatgactcagataatgagatccgaatg
gaaggtagccctatttcctcttcttcttctcagctttctcccatcccaatgtacggttcg
aactctcagcccggttacagaggtcagacaccttcctcacgcccttcaagcacaggcttg
gaggacattagcccaacgccgttacctgactctgacgatgatgagcccatccctgggacg
acttctctgagtcagaattcccgggggacgtcggaggccagcatgactcccattgatcag
ctgagcaggacctccaaaattgagacctcggaggctaaagaaatggtgcctggtgaccag
actccaacgtcagaaaaaatggacgagggtcagcattcttcaggggaggacatggaaatc
tctgacgacgagaccaaccctgcgcccatcaccagtgcagaatgtgccaaaaccattgtg
gtgaactcctctgtcagcaacacagctgtgatggccccatcaattccccccatgccacca
ccaggattccctcctcttcctcctccgccacctccacagccaggcttcccgatgcctcca
ccgctacctcctccacctccacccactcaccctgccgtcaccgtcccaccacctccgctc
ccggccccccctggggtccctccgcctcatatcttgcctccgcttcctccgttccatcct
ggcatgttccctgtcatgcaagtggatatgataagtgtcttgggcaaccagtggggtggc
atgccaatgtccttccagatgcaaactcagatgctgagccgcatgatgcaggcacaaaac
acataccagtatccgcctttcatgacgggccggatgcagtttgtgaatcttccaccatac
cgccctttctcgatgggagcagctcttggtcgtggacagcaatggccaccactgcccaag
tttgacccctcggttccaccaccgggttatgagccaaagaaggaagatccccacaaagcc
actgtggatggagtcctcctggtcatagtgaaggaactaaaggctatcatgaaaagggac
ctgaaccggaagatggttgaagtggtagcatttcgggcatttgatgactggtgggacaag
aaggaacgtctggcaaaggcatctctcactccagtgaagtctggaggagaactggaggaa
aaaccaaagccgaaggatcgaattgcatcttgtcttttggagaactggaacaaaggagaa
ggcctgggatatgagggaatcggcttgggcattgggttacgaggggccatccgattgcca
tccttcaaggtgaaaagaaaggagccacctgaagctgcctcagcaggagatcagaagaga
atccggccctccacttctgttgatgacgaagacgaagagtcagagagggacagggatgct
tccgatacaacatctgacctgtcaaagaaggatgcagaagcggtggggctgaggcggcga
ccagcaaggccactggagctcgacagtgagggagaagagggagatgagacatcagggaaa
gaggaagagtcctcctcagagaaggaagaggagcaggaagaagagggaggcttggtgaaa
ggagcacctggcaaggaggaagatgaggatgaggaggaagatgaggatgaagatgaagat
gaggaggaagatgaggacgaagatgaggacgatgaggagacaggcatagacacaagtgat
aaggaggaggagcaggactctgaggaggatgtagcaagtccctcatcttccaaggctgaa
gttgaatcatccgatgaaagtgaggactcctctgaattcgagtcaagttcggattcagat
gacgaagatgaggatgaagatgaggaggaggaggaagaagaagaggaggaagaggtgact
gaagatcaggacagagaagccatggttgctgagacagaccatgaacctgctggtcatgag
cttcctgatgatgagagggagactattttggagctgtatcctgtggatgactacatggat
acaacaggcttgggactcacagagccagctttggcagtaaaagacgaaggcatggaagaa
atcaaggcaggagaaagtgaatgcggtgaagtcccagaggcacggattgctgctgaaaca
ctgaaacatttggttatggaaagagaccaggagacaaaacttgcgctgtctcccatctgt
aggccagaggaagagtccgaacccgctaccatgctggagccagaggtacaggaaggtcca
aagcctgaatctcaagatgaagaggagacactctgtctcttgactccagtgggagtcttc
ggagaacctctgcccaataaaagcttctttagcaagtctgatgacagcagcttagaagct
cgtgtgaaaacaaaactgccctctgtagcggaggaagatgaccggctgcctcgcacacct
ggacgggaggtgatgatccattcagagactgatactcttttgcttccagcccacaaggtg
ccatcctccatgcttcccttaccatcgactcccggtaaagaagaatctttagtccctcca
gaaaagttccctgaacaactaatggtgaccaaaacgtccgtggaagaggagattcctagg
actcctgggcgggacattttggccaagtcttcacacccccttgtaaagtcacagagcacg
gacactgttccagccacgccaggaagcgatgctcccctcacgggaagcagcttgaccctc
agttcccctcaagtcccagggagccccttttcctacccatcccaatctcctggcattaac
agtggcattcctcggactcctgggagagatttcaattttacgcctactttcccagaggct
ggtgctaccattccttgccttctgtctggcaagaaacagtcagaggatgaactagatgag
aaaccctttaaagagcctctttgtgcttcccttacgatcagcatgaacagtgttccttcc
cctatcccctttgccagccccccacaagcagatttccacacggacatgggtttgccacat
gatgagccaatacctgtaacagccctgccatgcatgcatggagatggaagaatgcccatt
gaggaatgcaaggcagaagtaaaatctgttttgctctcatcagaagtacctgctggtgct
tctattcttcctcccccacctccaccttctgtccttcccaaaaggaggccaggtcggcca
aaacggtcaccaccttctgtcctctcattggatgtgtactcgggcaaaaccatagaacct
cctcctgtgccagtggctttggtggaaagcgctgtgggcaaagagctgttaagtggacat
cctgatgctttctatggactgaaagaccctgaagccgtcaccctggacttcaggaatgac
ggtttccatgagaaaatagcagctgagacagttgcagagaaactgccatttaaggaactg
gagaaccagtggaatgaagacttcaaggaagaagaagctcacgtgaaacctaaaagacag
tggcgaaggcagaagaagacacccgaggacctcccaatgattccttcccctgagtattcc
ccgccccggcctcagttcaggccacgctccgagtttgaggagatgaccattttgtatgat
atttggaacggaggcatagatgaggaagatatcaaattcatgtgtatcacatatgaccgc
ctgttacagcaggacaatggtatggactggctcaatgacaccctgtgggtattccatcct
tctactagcttttctacccccaagaaaaagaagcgggatgatgggatgcgggagcacgtg
acgggctgtgcacgaagtgaaggctattacaaaattgataagaaggacaaacttaaatac
ctcaataatagccgagcttttgcagaagagcctccagctgacacgcagggtatgagcatc
cctgcccaacctcacgcttccacccgggctggctccgagaggcggtcagagcaacgcagg
ctcctctcctccttcactggtagctgtgacagtgacctgcttaagttcaaccaactcaag
ttccgaaagaaaaaactaaaattctgcaagagccacattcatgactggggcctttttgct
atggagcccattgcagctgatgagatggtgatcgaatacgtgggtcagaacatcaggcag
gtcattgctgacatgcgtgaaaaacgatacgaggatgaaggcataggcagcagttacatg
ttcagagtggatcatgacaccatcattgatgccacaaaatgtggaaacttcgccaggttt
attaatcacagctgcaatccaaattgttatgctaaagtgatcacagtggagtctcaaaag
aagatcgtcatctactccaaacagcacatcaatgtgaatgaggaaattacctatgactac
aagtttccgattgaggatgtaaaaatcccgtgtctatgtggctctgagaactgcagggga
accctgaactga
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integrated database retrieval system
