Rissa tridactyla (black-legged kittiwake): 128917239
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Entry
128917239 CDS
T09443
Symbol
MSI1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128917239 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128917239 (MSI1)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128917239 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
128917239
NCBI-ProteinID:
XP_054075919
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All DBs
Position
13:12487266..12517226
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AA seq
456 aa
AA seq
DB search
MRRAAGGPAGVGGAGQVVPAGPSSLAPSPPGGEGSGEGAAWPVRPAPFPALICPGSAVPL
LAGRRGPNGDRRQPARPRLPGLPARPLQNVHRGTELADHARGLAGVLQPVRRGEGVPGDA
GPADKEIQVRGRARASLRPRRGPAATLTNFLSSLRIPSPARAAGLRGFGFVTFMDQAGVD
KVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV
DDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGS
ARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRSYTGIAPGYTYQFPEFRVERTPLPS
APVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSTPSRTGGFLGTTSPGPMAELYGAANQD
SGVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagggcggccggcgggccggcgggggtgggaggagccgggcaggttgtgcccgcc
gggccctcctccctcgctccctccccgcccggcggagaggggtcgggggagggggcagca
tggcctgtccgtccggccccttttccagcgctcatctgccccgggagtgcggtgccgctc
ctcgcagggagaagaggtccgaatggagacagacggcagccagcccggcctcgcctcccc
ggactccccgcacgacccctgcaaaatgttcatcgggggactgagctggcagaccacgca
agagggcttgcgggagtacttcagccagttcggcgaggtgaaggagtgcctggtgatgcg
ggacccgctgacaaagagatccaggtgagaggccgggcccgcgcctcccttcgcccccgc
cgcggcccggccgccactttaaccaactttctctcttctctccgcatcccctctcctgcc
cgggctgcggggctcaggggcttcgggttcgtcacgttcatggaccaggctggcgtcgac
aaggtcctggcccaatccagacatgaactggactccaagacgattgacccgaaggtagca
ttcccccgccgagcacagcccaagatggtgacccgaacgaagaagatatttgtgggtggt
ctgtctgtgaacactactgtggaggatgtgaaacaatatttcgagcagtttgggaaggtg
gacgacgcgatgttgatgttcgacaagacaaccaaccgacaccgagggtttgggtttgtc
acatttgaaagtgaagacattgtggaaaaagtgtgtgaaatccacttccacgagatcaac
aacaaaatggtggagtgtaaaaaagcccaaccgaaggaggtgatgtccccaacgggctcg
gcacgagggcggtcccgagtcatgccttacgggatggatgccttcatgctcgggatcggc
atgctgggttatccaggcttccaagctgccacctacgcgagtcgaagttacactggcatt
gcacctggctacacttaccagttccctgagttccgtgtagagcggacccctctcccgagt
gcccccgtcctccctgagctcacagcaatccccctcaccgcgtatggaccaatggcggca
gcagcggctgcagcagccgtggtgcgagggacaggttccacccccagtcgcaccggtgga
tttctgggcaccaccagccccgggccgatggcagagctttatggagccgccaaccaggat
tcaggggtcagcagttacatcagcgctgccagtccagccccgagcaccggcttcggccac
agcctagggggtcccttgattgcaacagcttttaccaatgggtatcactga
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