Rissa tridactyla (black-legged kittiwake): 128917403
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Entry
128917403 CDS
T09443
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
KO
K08524
retinoid X receptor alpha
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03320
PPAR signaling pathway
rtd04148
Efferocytosis
rtd04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128917403 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128917403 (RXRA)
03320 PPAR signaling pathway
128917403 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128917403 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtd03310
]
128917403 (RXRA)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128917403 (RXRA)
Nuclear receptors [BR:
rtd03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
128917403 (RXRA)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
DUF6021
tRNA_bind_3
CRT10
Motif
Other DBs
NCBI-GeneID:
128917403
NCBI-ProteinID:
XP_054076350
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All DBs
Position
14:2268130..2386705
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AA seq
467 aa
AA seq
DB search
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctgccactggatttctccaaccaagtcaattccacgtccctg
aactctcccacgagccgggggcccatggccaccccatccctccacccgtccatcgggccg
ggcatcggctcctcgctgggctccccgggccagctccactcgcccatcagcaccctgagc
tcgcccatcaatggcatgggacctccattctccgtcatcagctcccccatgggcccacac
tcgatgtccgtcccctccacccccagcctggggttcggcaccagcagcccgcagctcaac
tcgcccatgaaccccgtcagcagctcagaggacattaagccacccctggggctcaacgga
gtcctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgt
gccatctgcggggacagatcttcaggtaaacattacggggtttacagctgcgagggctgc
aaaggcttcttcaagcgcacggtgcggaaggacctcacctacacctgccgcgacaacaag
gactgcttgatcgacaagcgccagcgcaaccgctgccagtactgccgctatcagaagtgt
cttgcgatggggatgaagcgagaagccgtccaggaggagaggcagcgggggaaggaccgc
aacgagaacgaggtggagtcaacaagtagcgccaacgaggacatgcctgtggaaaagatc
ttggaagctgaactcgcggtggagccaaagacagagacgtatattgaagcgaatatgggc
ttgacgccgagctcgcccaatgacccggtgacgaacatatgccaggcagcagacaaacag
ctcttcaccctggtggagtgggccaagaggatcccccacttctccgagctgcccctggac
gaccaggtcatcttgctccgagcagggtggaatgagctcctaatcgcctccttctcccac
cgctccatagccgtgaaagacgggatcctcttagccaccgggctccacgtgcaccggaac
agcgcgcacagtgctggcgtcggggccatcttcgacagagtactgacagaactcgtgtca
aaaatgcgggacatgcagatggacaagacagagctaggctgcctgcgagccattgtcctc
ttcaaccccgactcgaaaggtctctccaacccagctgaggtggaggcgttacgggagaag
gtgtacgcgtcgctagaggcgtactgcaaacacaaataccccgaccagcccgggaggttc
gcaaagctcctgctccgtctcccagccctccggtccatcggcctgaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacgccgatcgacaccttcttgatggaaatgctg
gaagcgccccatcaaatgacttag
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