Rissa tridactyla (black-legged kittiwake): 128918251
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Entry
128918251 CDS
T09443
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00310
Lysine degradation
rtd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128918251 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128918251 (PRDM2)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128918251 (PRDM2)
Enzymes [BR:
rtd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
128918251 (PRDM2)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128918251 (PRDM2)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128918251 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-H2C2_2
zf-C2H2_11
zf-C2HE
zf-MYST
PyrI_C
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
128918251
NCBI-ProteinID:
XP_054078189
LinkDB
All DBs
Position
16:complement(3199446..3271579)
Genome browser
AA seq
1701 aa
AA seq
DB search
MNQNTTDSTVAVETLDDVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPKKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAPGEELLVWYNGEDDPEIAAAIEEERASARSRRHSPKAKKGKKKAQEGKN
KGKKAADIKQKKADLDSTSADMRDSKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLP
KLMIPSPASELQIVTEDKQGEAINCASDDLDDDEEEEDDDEEDDDDEIEDTDMPKENAEM
PLICEEKLDSMEEQKSTSEESPESSPKKKLVVKIPKARGESNGDVQETFMFPCQHCERKF
TTKQGLERHMHIHISTVNHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQH
LDNVADNQVIVDDGLKDDLNVSSLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKY
CKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPSLQTEQAPPVQSVYIASTEIEE
EGEVDDVYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVT
VEISSNLKVTQTHVNESPKEPSSSGSNESKKRRTASPPLVPKIKTEIDPEPVTPTSSLNL
PLSISTESLPFHKEKGVYLSSKLKQLLQTQDSKKITPPSEIPKLGPSVTSSPILPPVSSR
FKRRTSSPPSSPQHSPVLRDFVKSGEGKTVWNDNIRSSKMPKLESHSNSPAWSLTGREEK
ETLSPLCFEDYKISKDWAAAPTFGNVCNQQPLDLSSGVKQRSDVKNKNQVPWESVLDLSV
HKKPCSDAEIREYKENSIQPTCSGVKKKKPTTCMLQKVLLNEYNGTDAATDSTLGVTKSA
SPSKSLEPQAEPDVDPSLSASSSVDTQPLGSSVSPVPQASAVPSMCQLPPLLTPTNPPSP
PPCPPVLTVATSPPPLLPTMPLSIPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPS
PSPVPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNL
ENTLPIIKQEEAEHEQQKAREDPHTSSESGVVQETFNKSFVCNVCESPFLSIKDLTKHLS
IHAEEWPFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLH
PDKECTHHEFESGTLRPQNFTDPNKANAEHMQSLPEDSLEPSKEEEDEDLNDSSEELYTT
IKIMASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTA
IRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPIPLKQTVQPKNGMVVIAGPGKN
AFRRMGQPKRLNFNVEISKMSSNKLKISALKKKNQLVQKAILQKKKSAQQKAELKSNSSE
SDPHICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSSKKSASSSSPASSEKGSSQR
RRTADAEIKMQSMQPHLGKTRARTSGPAQIQLPSASFKSKQNVKFVPPIRSKKPNSSSSL
RNSSPVRVSKMSHVDGKKTKVAKNSSSGISSKTSRKLHVRIQRNNKAGLPSKSAVASKKK
ADRFTVKSRERIGGPITRSLQQAANAEAAENKRDESSAKQELKDFSYRLRMASRCPSSSS
HNTSTRQGKKSNCAASHFFKE
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgactctactgtcgctgtggagaccttagatgatgtacctgag
catgtgcttagggggcttcctgaggacgtgaggctcttcccatctgctgttgacaagaca
cgacttggtgtctgggcaacaaaatcaattttaaaaggcaagaagtttggaccatttgtt
ggtgacaagaaaaaaagatctcaagttaaaagcaatgtatacatgtgggaggtgtattac
ccaaacttgggatggatgtgtgttgatgcgacggatccaaagaaagggaactggctgcgg
tatataaactgggcacgttcaggaaaggagcaaaatctatttcctctggagatcaacagg
accatatactacaaaagtttaaagccaatcgcgcccggcgaggagctgttggtgtggtac
aatggggaggacgacccggagatagccgccgctattgaggaagagcgagccagcgcccgc
agccggcggcactccccgaaagccaagaaaggaaagaaaaaggctcaggaaggtaaaaac
aagggaaagaaggcagcggatataaagcagaaaaaggctgatttggattctacttccgca
gatatgagggattctaaagagggtcataaagaggaagatgaaacaccttctgtttctgct
gtactgtccctggaacaaacagctgtgattcaggaaatggtaaaccaagatgtacttcca
aagctgatgatccccagtcctgccagtgagctacaaatagtgactgaagacaaacaagga
gaagcaataaactgtgcatcagatgatttagatgatgatgaagaagaggaggatgatgat
gaggaggatgatgacgacgagatagaagataccgatatgcctaaagaaaatgctgaaatg
cctttgatatgtgaagaaaagttagactctatggaagagcaaaagagtacgtcagaagaa
tctccagaaagctctccaaagaaaaaacttgttgtgaaaattccaaaagcaagaggtgaa
tcaaatggcgatgttcaggaaacattcatgtttccctgtcagcattgtgagaggaagttt
acaacaaagcaaggacttgaacgccacatgcacatccatatatctactgttaaccatgct
ttcaagtgtcgatactgtgggaaagcctttggtactcaaattaacaggcgaagacatgag
cgacgccatgaggcagggccaaaaaggaaaccattcttaacactaacatcatcacaacac
ttggataatgttgctgataaccaggtaattgtggatgatggtcttaaagatgatctgaat
gtttccagtcttgtgcaagactctgttgtcttggattctgagaaagtttcccaagaaatg
tcaaactctgcttttgctgaggaaaataaggagcctaaagaattgcacccatgcaaatac
tgcaaaaaggtttttggaactcacaccaatatgcggaggcatcagcgtagggttcatgag
cgtcatcttattcccaaaggtgtcagaagaaaaggattctttactgaagagccatctctt
cagacagagcaggccccaccagtccagagtgtatatatagcaagtacagaaatagaagag
gaaggtgaagtagatgatgtctatattatggatatttccagcaatatctctgaaaattta
aattattatattgatggtaaaatccagtccaacagcagcactagcaattgtgatgtgatt
cagatggagtccaactctgcagacttgtatggactaaattgtatcatcagtccagtcaca
gtggaaatctcctcaaatttaaaggttacacaaacacatgtgaatgaatctcccaaggaa
ccctcgagcagtgggagcaatgaatccaaaaagaggagaactgccagccctcctcttgta
ccaaaaataaaaactgaaatagacccagaacctgtaactcctactagttctttaaatctc
cctcttagcatttcaacagaaagcctaccttttcataaagaaaaaggtgtttatttgtca
tcaaaattaaaacagcttcttcagacgcaggacagtaagaagataactccaccaagtgaa
atccctaaactaggaccttccgttacatcatcgcctattttgcctccagtatccagtaga
tttaaaagaaggaccagctctcctcccagttctccacagcacagtccagtacttcgagat
tttgtcaaatcaggtgaaggaaaaactgtgtggaatgataatattcggagctcaaaaatg
ccaaagttagaaagccacagcaactcacccgcttggagcttgactggaagggaggaaaaa
gagactttgagccctctttgctttgaagattataaaatatcaaaagactgggcagcagct
ccgactttcggcaatgtgtgcaaccagcagccactggatttatctagtggtgtgaaacaa
cggtctgatgttaaaaataagaatcaggttccctgggaatctgttttagatttaagtgtg
cataagaagccttgcagcgacgctgaaattagggaatataaagaaaattccatacagcca
acctgcagtggtgttaaaaagaagaaaccaaccacttgcatgttacagaaggttctgctg
aatgagtacaacggaacggatgcagccacagacagcacgctcggtgtaaccaagagtgcg
agcccaagcaaatccctggagccgcaggcagaacctgacgtggatcccagtctatctgca
tcatcttctgttgacactcagccccttggttcctctgtttcccctgtgccacaggcatct
gctgtaccttccatgtgccagctgcctcctttgttaacaccaaccaatcctccttcccca
ccaccctgcccgcctgtcttaacagttgctacatcacctcctccccttcttccgacaatg
ccgttatcaattcccgatgtctctgccagtgccaccaacacttcttcttgcccgtcgcca
ctttctaacactactacccagtccccgctgccagttctttcacctactgtgtctccttct
ccatctcctgttccttctgttgaacctcttatttctgctgcttcacctggtcctcctaca
ctctcttcctcatcttcctcctcctcttcttcctctttctcctcctcttcatcttcatca
tctccatctccacctcctctttctgtagtttcttctgttgtttcctctgctgataatctt
gaaaatactctcccaataataaagcaggaagaagctgaacatgaacaacagaaagcaaga
gaagatcctcatacttcaagcgaatcaggagtagtgcaggaaacattcaataaaagcttt
gtgtgcaatgtctgtgaatcaccttttctttctattaaagacctaacgaagcatttatcc
attcatgctgaagaatggcccttcaaatgtgaattctgtgtacagctttttagggataaa
acagacttgtcggaacatcgctttctgcttcatggagtaggaaatatctttgtttgctca
gtctgtaaaaaggaatttgcttttttgtgcaatttgcaacagcatcagcgggatctccac
ccagacaaagagtgcacacaccatgagtttgaaagtgggactttgagaccccagaatttt
actgaccccaataaggcaaacgcggagcacatgcagagcctgccagaagattctttggaa
ccttctaaagaggaggaagatgaagatctaaatgattcctccgaagagctttatactact
ataaaaataatggcttctggggtaaaatctaaagatccagatgttcgtatgggcctcaat
caacactacccgagctttaaaccgcctccatttcagtatcaccatcgtaatcctatgggt
attggagttactgcaacaaacttcactacccacaatattccacagacttttactactgcc
attcgatgcacaaaatgcgggaaaagtgttgataacatgcctgagttacacaaacacata
ttggcctgtgcatctgccagtgataaaaagagatacacacctaaaaaaaatccaatacca
ctgaaacagacagtgcagcctaagaacggcatggttgttatagctggccctggaaagaat
gccttcagacgaatgggtcaacctaaaagacttaatttcaatgttgagattagcaaaatg
tcctcaaataaactaaaaataagtgcattgaaaaagaaaaaccagcttgtccagaaagca
atcttgcaaaaaaagaaatctgcccagcagaaggcggaattgaaaagtaattcatccgag
tcagaccctcacatctgcccctactgtaatagagagtttacttacattggaagtttgaat
aaacacgcgtcatacagctgtcccaaaaaacccatctctccctcctctaaaaagaattct
tcaaaaaaaagtgcaagttcttcttcacctgcaagcagtgaaaaaggcagcagccagcgt
aggcgaacagcagatgcggaaatcaaaatgcaaagcatgcagccacacttgggcaagaca
cgagcacgaacctcaggacccgcacagatccagcttccctctgcatccttcaaatcaaaa
caaaatgttaaatttgtacctcccattcgatctaaaaagccaaattcgtcttcgtcattg
aggaactctagtcctgtaagagtgtccaaaatgtcccatgttgatgggaaaaaaactaaa
gtcgctaagaacagttcctctggaatctcaagcaaaacatcccggaaattgcacgtcaga
atacaaaggaataataaagctgggttgccaagtaaatctgctgtggcaagtaagaaaaag
gcagatagattcactgtaaaatctagagagaggattggaggacctattacacgaagccta
cagcaggcggcaaatgcagaggcagcagaaaacaaaagagatgaaagcagtgcaaagcaa
gaactaaaagatttcagttacaggctccgcatggcctctagatgtccctcctcctcttca
cataacaccagcaccaggcaaggcaagaaatccaactgcgccgcatcccacttcttcaag
gaatag
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integrated database retrieval system
