Rissa tridactyla (black-legged kittiwake): 128918908
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Entry
128918908 CDS
T09443
Symbol
COL8A2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
128918908
NCBI-ProteinID:
XP_054079747
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Position
18:complement(2047839..2078634)
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AA seq
695 aa
AA seq
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MLPDTVALLVVLVMVLGLRSAAGGGAGGYAQVKYMQPMVKGPLGPPFREGKGQYLDMPPL
LPMDLKGEPGPPGKPGPRGPPGPPGYPGKPGTGKPGMHGQPGPAGPPGFSGIGKPGIPGL
PGKAGMKGMPGAKGEPGMRGEQGPRGLPGPPGLPGPAGISVNGKPGPQGGPGLPGFRGEP
GPKGEPGPRGERGMKGENGVGKPGLPGPRGNGGPPGPAGPPGPVGIGKPGLDGLPGAPGE
KGDMGPPGGPGVNGEPGPMGPRGPPGIDGIGVPGAAGVPGIQGPMGPKGEPGIRGLPGLP
GPTGYGKPGLPGLKGDRGQPGVPGAIGDKGEPGADGEPGEPGPAGIIGPPGPPGSMGLPG
KHGLPGSKGDVGPSGPPGMPGMRGDQGLNGFAGKPGVPGERGLPGSQGPPGPTGPKGEPG
FIGLPGVPGLTGGPGPKGDGGIPGQPGLRGPSGIPGLQGPAGPMGPQGLPGLKGEPGLPG
VPGEGKTGEPGMAGPIGPPGMPGTPGLNGPPGPPGPPGPPGAPGVFDETGIAGLHLPDGG
VEGAVLGNGKPGKPQYGRGELSARIAPAFTAILTSPFPASGMPVKFDRTLYNGHNGYNPV
TGIFTCPVSGIYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGSAVLELK
ENDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgctgccggacaccgtggcgctgctggtggtgctggtgatggtgctcggccttcgctcg
gcggcgggaggcggcgcggggggctacgcccaagtgaagtacatgcagcccatggtgaag
ggacccctgggaccccccttccgcgaaggcaaagggcagtacctggacatgccgccgctg
ctgccgatggacctcaaaggggagccaggaccgccagggaagcccggcccacgtggaccc
cccgggccccccggctacccgggaaagccgggcacagggaagccgggaatgcacggccag
cccgggcccgctgggccccccggcttctcgggcattgggaaacccggcatcccaggactc
cccggaaaggcgggtatgaaagggatgcccggagccaagggcgagcccggcatgcgagga
gagcaagggccaagaggactgcccggccccccggggctgccggggccggccggcatctca
gtcaatgggaagccaggcccccagggtggccccggcctacctgggtttcggggcgagcct
ggcccgaaaggagagccgggtccccggggagagcgagggatgaagggtgaaaatggtgtg
gggaagccagggctaccaggaccccgggggaatgggggccctccggggcccgcaggaccc
ccagggcctgttggcattggaaaacccggcctcgacggcctgccgggtgcaccgggggag
aagggcgacatgggccctccgggcgggcctggcgtcaacggggagcccggccccatgggg
ccgcggggaccccctggcatcgacgggatcggcgtcccgggtgctgcgggggtgccgggg
atacagggccccatgggaccaaagggagagcctggcatccgtggcctccctggtttgccg
ggcccaacgggctacgggaagccgggcttgcctggcctaaaaggagaccgcgggcagccg
ggggtgccgggagccatcggcgataagggggaacctggtgctgacggggagccgggtgag
ccgggccctgctggcatcattgggccaccaggcccgccggggtccatgggcctgccaggc
aagcacgggttgcctggctccaaaggggatgtggggccgagcgggcccccaggaatgccg
gggatgcgcggcgaccagggcctgaacggcttcgcggggaagccgggggtgcctggagaa
aggggcctgcccgggtcacagggaccccccggcccaacgggtccgaaaggagaaccgggg
ttcatcggcctcccgggggtgccaggattaacgggcggccccgggccgaaaggggacgga
gggatcccggggcagccggggctgaggggcccctccggcatcccgggcttgcaaggacct
gcaggtcccatggggcctcaggggttaccagggctgaaaggggagcctgggctccctggg
gttcccggtgaggggaagacgggcgagcccggcatggccggacccattggccccccagga
atgccaggaacaccagggctgaacgggccgccgggcccgccagggccacctgggccgccg
ggagcgcctggcgtgttcgacgagacgggcatcgcggggctgcacctgccggacggtggc
gtggagggggccgtgctgggcaacggcaagccggggaagccgcagtacggccgaggagag
ctctccgctcggatcgcaccagccttcaccgccatcctcacctcccccttcccggcgtca
ggcatgccggtcaagttcgaccggactttgtacaatgggcacaacggctacaacccagtc
accgggatattcacctgccccgtatccggcatctactactttgcctaccacgtgcatgtc
aaagggacaaacgtttgggtggcgctttataagaacaacgtgcctgccacctacacctac
gacgagtacaaaaagggctacctggaccaggcctcgggcagtgccgtgcttgaactcaag
gagaacgaccaagtctgggtacaaatgccctcggaccaggccaatgggttgtactccacg
gaatacatccactcctccttctccgggttcctgctttgccccacataa
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