Rana temporaria (common frog): 120940296
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Entry
120940296 CDS
T07929
Symbol
NUP214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120940296 (NUP214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120940296 (NUP214)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120940296 (NUP214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup214_FG
ANAPC4_WD40
WD40
Motif
Other DBs
NCBI-GeneID:
120940296
NCBI-ProteinID:
XP_040208997
LinkDB
All DBs
Position
5:117951995..118092005
Genome browser
AA seq
2088 aa
AA seq
DB search
MEEDTDAPPERDTKDFVFRQLTKLRIFEPPQDLPKDRSALLAISNKYGALFIGSPFGLKI
FSTSDVLIPIKTGVDPNSIAASPPGIDVPTKYPVHHVALSSDNLTLSVCMSSNDNGCIIS
FYDTRTLLNKARQPKQAFASQRLLQDAGSFVSDLKWNPVASNVAVCLSDGSISVLQVTDT
VSLYASLPVATGVTSVCWSPKGKQLAVGKQNGTVVQYLPNLQEKKVIPCPSFYDSDNPVK
VLDVLWISTYVFAVVYAAADGSVETSPQLVMVLLPKKEDKRGERFLNFTEICYCSVNNER
QHHFFMNYMEDWEVLLGASAASIEVSVIAKLPDQNTWELWILEDAGRAELPLSDNSDDTL
PMGVVLDFTSRLEIAINEEKVLPPSPILMILSTDGVLCPFHVINLNPNVKTLTTPLEELR
LEGERLPRNASSVPSHPPQGPGAPSSTLSASNPAFSIPASNLASKVQPASPAFSLPVTTS
KPAQVFTPATASFPSKPQTTSQVFGAPAASFPSKPQAAAQGFGAMVSSLPSKPQASVSHF
GVTGPVGKPQESTTGFSFSTNSPSASVGTAHPGFSVPSNPQGFSFPVQGPPAFGTSTSKP
DNATNIAQQATSSNFAFSTSNVKVNLSEKFSAVDAAATKPGFTPHSQSYPLTPPVKATVA
AVPQSSIGPPSIQSPSMMTPNRSFPDGHPQQATPVMRQKALKISSSEVKQTPPQPQATNP
IINAIQEEIAHFQKEMDELKARTAKACFIVGTAAEMRHLMTECNDLDCFVRDIKATTESL
HNDNGCLQTTLRDAFTTVQDAKELNEKKKNPVYCRLLQQRPLDPKSEAQMQEIRRLNQYV
EYAIQDVNNVLDYRWDQYLYNRKKQRGIVVPQRETLFNTLASHQEIISQQRQRLNQQVDK
LQELGLYNQTSQWTVQMDSSNGQRQFEEELKNLQIAMSKTALEAKPQPSPKVQPKISKLK
LNQLRNFLAIRKPPVVRSLAPVNLCRSSFLAPSYFEDLDDVSSTSSLSEAADNEEMQAPP
QHEAFKRDTPPPELSAIRTARHAQVTRTASVQPGFGTPSLPFGKSQSQIGPITSTPAVPA
QAIRVIPQGADSTMLATKTVKHGAPTVTASQAAAAAALRRQNSCQVPASLTESTLQTVPQ
VVNVKELKSNGPGPNISTVIGPSVPQSAAQVVNQVLVTVGSAPAKQAQLQPPSGFKTPSA
SAPTSNVIAQTGSGLATNKTGQTSSKFEAQSTTSTGLTSGLQGNKAFSFSGPSGVFPMGN
GAPSSAPSSSLGSIAQVKDASLPTPFINNNGNKFQFGLGTESNFAFGPPKPATGISTANP
SDSTSAKSTSAQAPPLTTSLSTGVGMAAAQTFTGGETLGSFSGLRVGQAEEVPKTEPPKV
TPSIQPVKISGGSTLTGIGGFQPSKPVEPASSISSSSTMFGNMKLSNPGIAGGFNSTSIK
QNFSFTTPATTTSETEVSSTTQVASSLPFGGFIAPSTSLQTPTTTVSASLPTPVPSSTPV
EATQPAPEKPPNEPVVLPPQLQALLASVTESSKEPASAPTFSTAERTMATVPAVIPTVAK
TTTPVSGFSTTASANLNVPITSTPTSITHLSPPAATTSEGPPSNTPVLVTSAPTLGPTST
PVTSASPGSTATASFGQPPVATAPTTTAGSLFGQAPAPNTGTLFGQPSNTSTTTSGITTS
GFGTSGFGSADGGGGFGQPTFGQTASLWKAPANSSSNFSFAPSAFGSQPAFGQAPASTAA
TSSGGSLFGGTANTSSAGSFSFAQPPSSNNASTSGGGLFGQSSTPVFGQGSTFGQSAPVF
GSASSSTTTTTTSSSAFSFAQPSAFGSNSTGSVFGPSQSGNNAGVFGQAPATGGGLFGTS
GNSTGGGFFSGLGGKPSQEAANKNPFGSANTNTNTNTNTGFGSPSSANTNSLFGNSGAKS
FGFGNTSFGEQKTTGTFSAGGSVATQGFGFSSPTKTGGFGAAPVFGSPPTFGGSPGFGGT
PAFGSAPNFSSPLGSNGGKVFGEGTAAANTGGFGFGSNAPAATFGNLASQSAPTFGSLSQ
QGPGFGAQNSGFSGFGSGTSGAAPASSGGFAFGASNQSTSTFGGGWRG
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatactgatgccccccctgagagggacacaaaggatttcgtgttcagacag
ttgacaaagttgcgtatcttcgaacctccacaagaccttcccaaagatcgctccgctctc
ttggccatatccaacaagtatggggccctgtttattggcagtccttttggtctgaagatt
ttctctaccagcgatgttctgattcctataaaaactggagtggacccaaacagcattgct
gccagtccacctgggattgatgtgccaacaaaatatccagtgcatcatgtggccttgagt
tctgacaacctcactctgtctgtctgcatgtcctccaatgacaatggctgtataatctcc
ttctatgatactcgtacactactgaacaaggccaggcaacctaaacaggcctttgcatct
caaagacttttgcaagatgctggcagttttgtttcagaccttaaatggaacccagtagct
tctaatgtggctgtctgtctaagtgatgggagcatctccgtgctacaggtcacagatact
gtaagtctgtatgccagcctgcccgtagctactggggttacctcagtgtgttggagcccc
aaaggaaagcagctggctgtcggcaaacagaatggcacagttgtgcagtacctcccgaat
ctccaggagaagaaagttattccctgtccttccttttatgattcggataatccagttaaa
gtgctggatgttctatggatcagcacatacgtctttgcagtggtgtatgcagctgcggat
ggctctgtggaaacctctcctcagcttgtgatggtcttgcttccgaaaaaggaagacaaa
cgaggggagcgcttcctgaattttacagagatctgttactgcagcgtcaacaatgaaagg
cagcatcatttctttatgaattacatggaggattgggaggtccttctcggagcttctgca
gcttccatagaagtcagtgtaattgccaagctacctgaccagaacacctgggaactatgg
attttggaagatgcaggccgagctgagctaccgttgtctgacaacagcgatgacaccttg
cctatgggagttgtactagattttaccagccggctagaaatagcaatcaatgaagagaaa
gtcctgcctccttcccccatacttatgatactttccactgatggtgtcctctgccccttt
catgtgatcaacttaaatccaaatgtaaagactctcaccacacccctggaggaacttcgt
ctggagggggagcgactgcctagaaatgcatcaagtgttccttcccatcccccccagggt
cctggagctccatctagtacactttcggccagcaatccagcttttagcattcctgcatct
aaccttgcttccaaagttcagccagcatccccagcttttagtttgcctgtcactaccagc
aaacctgcccaggtttttactcctgccacagcaagttttcccagcaaaccgcagaccact
tcacaggtgttcggcgctcctgcagcaagttttcccagcaaacctcaggctgctgcacag
ggatttggtgccatggtttcaagtcttcccagcaaaccgcaggctagcgtttcacatttt
ggtgtcacaggccctgttggaaaaccccaagaatcgactacaggtttcagcttttccaca
aattcgccatctgcttcagtaggaacagcccaccctggcttttctgtgccatcaaatccc
cagggtttttccttccctgtccaaggacctccagcttttggaacctccacttccaagcca
gacaacgccactaacattgcacaacaagcaaccagctccaattttgcattttctacttct
aatgtcaaagtgaaccttagcgagaaattcagtgccgttgatgcagcagccacgaaacct
ggttttactcctcatagccagtcatatcctttaacccctcctgtgaaggccacagtggca
gctgttccccagagtagtattgggcctccatcaattcagtcaccgtccatgatgactcct
aaccgctcatttcctgatggccatccgcaacaagcaaccccagtaatgcgccagaaggct
ttgaagatcagctcatcagaggtgaagcaaacacctcctcagccccaagctaccaaccct
attataaatgcaatacaagaagagattgctcactttcagaaagagatggatgaattgaaa
gcacggacagcaaaggcctgtttcattgtagggactgctgctgagatgagacatttgatg
accgagtgcaatgatcttgattgctttgtgcgggatatcaaagcaaccacagagtcacta
cataatgataatgggtgtctacaaaccaccctgcgcgatgcatttacaactgtgcaggat
gcaaaagagctgaatgaaaaaaaaaagaatccagtatactgccgtcttctgcagcagaga
cctctggaccctaagagtgaggcacagatgcaggaaattcgcagactcaatcagtatgtg
gaatatgctattcaggatgtcaataatgtccttgattatcggtgggatcaatatttgtac
aacaggaaaaaacagaggggcattgttgttccgcagcgagagacgctttttaacacgttg
gctagtcatcaggaaatcatcagccagcagaggcaacgattaaaccagcaggtagacaaa
ttgcaggagctcggcctgtacaaccagacctctcagtggactgtacagatggactcatcc
aatggtcaaagacaatttgaagaagagctaaaaaacctgcaaattgcaatgtcgaaaact
gctttggaggcaaaaccccagccctcacctaaagtgcagcccaagatatcaaaattaaag
ctgaaccagctgagaaattttctggccatcaggaaaccaccagttgttagatcacttgct
ccagtcaacctttgtcggtcatcattcctggccccgagttactttgaagacttggatgat
gtaagctcaacatcttctctttctgaggcagcagataatgaagagatgcaagcacctcca
caacacgaggcatttaaacgagacactccaccaccagagctatctgctatccgaactgcg
cgccatgcccaagtgacacgtaccgcatctgtgcagccaggctttgggacaccatcactt
ccatttggaaaatctcagtctcaaattggtccaattacaagcacccccgccgtccctgca
caagccatcagagtgatcccacagggtgcagacagcacaatgttggctaccaagactgtc
aaacatggagctcccactgttacggcttcacaagcagctgctgcagcagctttgagaaga
caaaattcctgccaggtgccagcctcactgacggaatccactctgcaaactgtaccccag
gtggtcaacgttaaagaattaaagagcaatgggcctggtccaaatatttccacagtgatt
gggccttctgttccacagtctgctgctcaggtggtcaaccaggtgctagtgaccgtagga
tcagctcctgctaaacaggctcagttgcagccacccagtggattcaagaccccatctgct
tcagctcctaccagcaatgtaattgcacaaacaggatctgggttggcaaccaacaaaacg
ggacaaaccagttcaaaatttgaggcccagtctacaacttcaactggcttgacatctggt
ctccaaggcaacaaagcgttttctttttcaggacctagtggtgtgttcccaatgggtaat
ggcgctccatcttctgctccgtcatccagtctaggaagtatagctcaagtaaaggatgct
agcctgccaaccccttttatcaacaacaatggaaacaagttccagtttggccttggaaca
gaatcaaactttgcttttggccctcctaagccagccactggtatctccactgccaacccc
tcagattctacaagtgctaaatcaacatctgcccaagcacctccacttactacatcacta
tccactggtgtaggcatggcagctgcacagaccttcactggaggagagactttgggcagt
ttttcaggactgagggttggtcaagctgaagaagtacccaagacagagcctcctaaagtc
actccatcaatacagccagtaaaaatttctggtggttctaccttgacaggcattggagga
tttcagccttcaaaaccggtagaaccagcttcatcaataagcagctcttcaaccatgttt
ggtaatatgaaattatcaaaccccgggatagctggtgggtttaattctactagcattaag
cagaacttctcatttacaacaccagccaccacaacttctgaaactgaagtttcgtccaca
acacaagttgcatcatctctgccttttggtggttttatagctccttcaacatcacttcag
actcctacaacaacagtttcggcttcattgcctacacctgtacccagctccacacctgtg
gaggccacacaaccagcacctgaaaaaccaccgaatgagcctgtagtactccctccccag
ctgcaagcattacttgcttccgtaacagagagtagtaaggagcctgcttctgccccaaca
ttttcaacggctgaaagaacaatggccacagttcctgctgtcatacctacagttgctaag
acaactacacccgtttccggtttttcaaccacagcgagcgccaatcttaatgtccccatc
acttccacacctacatcaattactcatctgtctcctcctgcagccaccacctctgaggga
cctccttctaatactccagtgttggttacatcagctcctacattgggtccaaccagcaca
ccggtcacgtctgcatctccagggtctactgcaacagcctcttttggccagccaccagta
gcaactgcacctactacaacagctggttctctctttggccaggcaccagcacctaataca
ggtactctgtttggtcagccaagcaatacatctaccaccacatctgggattactacttct
ggctttggcacatcaggttttggatcagcagatggtggtggaggctttggacagcctaca
tttggtcaaacggcatcgctttggaaagccccagctaactcttctagcaacttctccttt
gcaccatcagcctttggatcacaaccagcctttggacaggctcctgcttcaactgctgca
accagtagtggtggtagcctgtttggagggactgcaaacacaagcagtgcaggttcattc
tcatttgcgcaaccgccaagcagcaacaatgcatccacttctggaggaggcctatttgga
cagagcagcaccccagtttttggccagggctccacatttgggcaaagtgctcctgttttc
ggcagtgcaagctcatctacaacaacaacaacaacgtcatcttctgcattcagctttgcg
caaccatcagcatttggctccaattccactggatctgtatttggcccatcgcaaagtggc
aacaacgcaggtgtctttggacaggcgcctgccaccggtggggggctttttggcacaagc
ggcaatagtacgggtggtggtttctttagcggtcttggtggtaaacccagccaggaagct
gccaacaagaacccatttggatcagccaacaccaacactaacaccaacaccaacactggt
tttgggtctcccagctctgcaaatacaaacagtctctttggcaacagcggggcaaagagt
tttggatttggcaacacatcatttggagagcaaaaaacaaccgggacattcagcgctggt
ggcagcgtggctacacaaggatttggcttttccagccccaccaagacaggtgggttcggc
gctgctccagtgttcggcagccctccaacatttgggggatcccctggattcggagggacg
ccagcatttggttcagccccaaatttttcaagcccgctgggctcaaatggcggcaaagtg
ttcggtgaaggtacagctgcagctaacacaggaggatttgggtttggaagcaacgctcca
gctgccacatttggcaacctagccagccagagcgccccaacttttgggagtctgtcccag
caaggacctggatttggtgcacagaatagtggattttctggatttggttctggtactagt
ggagcagccccagcaagcagtggaggttttgcatttggagcatcaaaccagtctacatcc
acatttgggggtggctggagaggctga
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integrated database retrieval system
