Rana temporaria (common frog): 120940528
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Entry
120940528 CDS
T07929
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 12-like isoform X1
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00512
Mucin type O-glycan biosynthesis
rtem00514
Other types of O-glycan biosynthesis
rtem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
120940528
00514 Other types of O-glycan biosynthesis
120940528
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtem01003
]
120940528
Enzymes [BR:
rtem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
120940528
Glycosyltransferases [BR:
rtem01003
]
O-Glycan biosynthesis
Mucin-type
120940528
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
120940528
NCBI-ProteinID:
XP_040209380
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Position
5:185915810..186192588
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AA seq
599 aa
AA seq
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MSKRRRGVLGPWLPHRRRKSLFVFVTIACILLFGFLLLSKGVDDVGSQNSEGHELEKHVM
PREEAAIQNELSDEQLKRPVYEKPLLNSNALGEFGRAVNLNLDGDEKNLEEESINKHQIN
IYLSERISLHRRLAERWNPLCGTVKYGYQRLPKTSVIIAFYNEAWSTLLRTVHSVLETSP
DILLEEVILVDDYSEKEHLKERLQEYVSNLRKVRLIRANKREGLVRARLLGASQAKGEVL
TFLDCHCECHIGWLEPLLERIREEETAVVCPVIDVIDWRTFEYLGNSGIPQVGGLDWRLV
FTWHVVPDREQKQRRSSIDVIRSPTMAGGLFSVSKKYFEYLGSYDTGMEVWGGENLEFSF
RIWQCGGTLEVHPCSHVGHVFPRQAPYSRSKALANSVRAAEVWMDEYKELYYHRNPHARL
EPYGDVTERRQLRERLQCKPFKWFLENVYPELHVPEDKPGFFGMLKSKGMANHCFDYNPP
SENEVTGQKIILYPCHGMGQNQFFEYTSYNEIRYNTRQPEGCVAVDQDSDHLTMYLCREN
GQAVPENQKFIFREDGTLLHQQTQKCIQAERNSQTGNPEPVLRPCLDIDLQKWFFQERS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaggagacgtggagttctaggtccttggttgcctcaccggagaaggaagagt
ttatttgtgtttgtcactatagcttgtatattgttgtttgggttcctgctgctaagtaaa
ggggtggatgatgttggtagccagaattctgagggacatgaactagagaagcatgtgatg
cccagggaagaggctgcaatacaaaatgagttaagcgatgaacaacttaagaggccagta
tatgaaaaaccactgctcaattctaatgccttgggagagtttggacgagcggtgaatctc
aaccttgacggcgacgaaaaaaatctggaagaggagagcatcaacaaacatcaaataaac
atctacctcagtgagagaatctcattacatcgccggctggctgaacgatggaatccatta
tgtggaactgtgaagtatggctatcagaggttacccaaaacatctgtcatcattgcattt
tacaatgaagcatggtccacactcttacgtacagtccacagtgtcctggaaacctctcca
gacattcttcttgaagaagttatcctagtagatgattatagtgagaaagaacatctgaag
gagcgtttgcaagaatatgtgtctaatctgaggaaagttcgactaattcgtgcaaacaag
agagaaggtctagtacgagcacgactccttggtgcctcccaagccaaaggagaagttttg
actttccttgattgccattgtgagtgtcatataggctggttggaaccacttctagaaagg
atccgggaagaggaaactgcagtagtatgccctgtcatagatgtcatagactggcgcact
tttgagtatttaggcaattctggtatacctcaggttggaggactcgactggagacttgtc
ttcacttggcatgtggtcccagacagagagcaaaagcaaagacggtcctctattgatgtt
atcagatcaccaaccatggctggtggattattctcggtcagtaagaagtactttgagtat
ctgggatcttatgatacagggatggaagtatggggaggagaaaaccttgaattctcattc
agaatttggcagtgtggaggaacacttgaagtacacccatgttcacatgttggacatgtt
tttcccaggcaagccccatactcgcgtagtaaagctttggctaatagtgtgcgagcagca
gaggtttggatggatgaatataaagaactttattaccaccgaaaccctcatgcgcggctg
gagccatatggagatgtgacagagcggaggcaactcagggagagactacagtgcaaacct
ttcaaatggtttttggaaaatgtataccccgagctccatgtacccgaggacaagccaggc
ttttttggaatgctcaaaagtaaagggatggccaaccactgctttgactataatcctcct
agtgagaatgaagtcaccggacagaaaattatcttatacccatgccatggtatggggcag
aatcagttctttgaatacacatcgtacaatgaaattcgatacaacacgcgccagcctgaa
ggatgtgtagcagtagatcaggactctgatcacttgacaatgtatttatgtcgagaaaat
ggccaggcggtgcctgaaaaccagaagtttattttcagagaggatggtaccttgctacat
cagcaaacccaaaagtgcattcaagctgaaagaaactctcaaacaggaaatcctgagcct
gtattaaggccctgtttagatatcgatctacagaaatggtttttccaagaaagaagttga
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