Rana temporaria (common frog): 120940696
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Entry
120940696 CDS
T07929
Name
(RefSeq) collagen alpha-1(XXI) chain-like
KO
K16629
collagen type XXI alpha
Organism
rtem
Rana temporaria (common frog)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
120940696
NCBI-ProteinID:
XP_040209621
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Position
5:246824910..246962942
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AA seq
954 aa
AA seq
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MKPTWALHVFAFSVFIHLVKGQVSEEDAQAGCRTAVNDLVFIVDGSWSVGYVDFDTAKNW
LINITSSFDIGPSYTQVAVVQYSDSPRLEFPLGQHRTNQQLINALKSMKYLGGNTQTGRA
IQFATENVFPSSQRPNLTKNRIAIVVTDGKSQDDVVETAAQARAQNIIMFAVGVGSEITK
SELVAIANSPSTDYVLYAEDYTTIDRIKETMQQKICEESVCPTRIPVASRDEKGFELLVG
MNIHKKGQMITGSLVSEKAYLLTPSVDVTENTREIFPEGLPPSYVFVATIRLQSPENQDI
VDLWRILSKAGEVQVAVTLDGTDNSVIFTVTQLNANSQVIKFKDPKLKVLFDEKWHQLKI
LVKNKSANLFLDDTLIENRVLEEIGPIFINGKTQVLKRQTSDESLTMEIQKLRLYCDPEQ
SERETACEIYTVNDPRCPLERVPSLSCQCPEGQPGSPGVPGPEGSEGRIGERGTPGADGK
PGLPGPPGPPGIPGTSGQKGPQGLPGLQGDSGLPGIQGLPGINGVPGPIGPKGSIGPTGQ
AGNPGIPGKKGSKGERGLVGTPGHHGPPGESGLPGRNGNPGPAGAKGDKGSLGQPGIDGP
PGIPGFRGAPGLPGTVGSKGERGMPGPKGVVGPPGLKGDNGANGLPGAEGHQGPKGIQGD
SGPPGPSGLSGLKGQMGHPGLPGLEGSMGIQGPKGHKGDTGDDGIKGTQGEKGEAGQPGN
PGIRGQEGSKGAKGEKGELGDIGVKGPEGKKGEHGILGLPGPRGFPGDSGPQGRSGIPGT
PGKPGKSITDDHIMKLCSNVLRAQFPSLLQNMNPSCPPCEGKQGSPGLPGTQGRPGERGP
QGYPGRGGRSGYPGIQGLPGPQGLKGDTGSKGDKGSKGERGIGQPGPPGPAGSPGMNGVN
GEGIVGPPGNPGKNGVPGTLGKRGFPGPAGVCDLSSCLSAYGARDDPFRKGPNF
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctacttgggcattacatgtttttgcattctcagtatttatacacttagtaaaa
ggacaagtaagtgaagaagatgctcaagcaggttgcagaactgcggtgaatgatttagtg
ttcattgtggatggctcctggagtgtagggtatgtcgattttgacacagcaaagaactgg
ttgataaacatcacaagcagctttgacataggaccttcctacactcaggtggctgtggtt
caatacagtgattccccaaggctagaatttccacttggacaacatcggacaaaccagcaa
cttatcaatgctttgaaaagtatgaaatatctgggaggcaatacccagacgggtcgagca
attcaatttgccactgaaaatgtgtttccctcttctcaaaggcctaaccttaccaagaac
aggattgcaattgtggtcacagatggcaagtcccaagatgatgtggtggagactgctgca
caagccagggcacaaaacatcattatgtttgcggtgggagttggttctgaaataaccaag
tctgagcttgtggcaattgccaatagtccttccacagattatgtgctgtatgcagaggac
tacaccacgatagataggattaaggagacaatgcaacaaaagatatgtgaagaatctgtg
tgccctactcgaatacctgtggcatcacgtgatgagaagggatttgagctgcttgtgggg
atgaacattcataaaaaaggtcagatgataaccgggtctttggtgtcggaaaaagcctat
cttcttacaccttctgtagatgtgactgaaaacaccagagaaatatttccagaaggtctg
cctccctcctatgtgtttgtggctaccatacgtttacagtctcctgaaaatcaggacatc
gttgatctgtggagaatactttctaaagcaggagaggtccaggtagcagtcactctagat
ggcactgacaactcagtcatttttactgtcacacaactgaatgcaaattcccaagtgatt
aagtttaaagatccaaaattaaaggtcttatttgacgaaaaatggcatcagctgaaaatc
cttgtaaaaaataaaagtgcaaatctatttctggatgacactctcattgagaatcgagta
ctggaggaaattggaccaatatttatcaatggcaaaacacaagttttaaagagacagaca
tctgacgaatctcttactatggagatacaaaaattaagattgtactgtgatccagagcag
agtgaacgagagacagcctgtgaaatctacactgtgaatgatccaaggtgtccccttgag
cgggtaccgtccctttcttgccaatgtcctgaaggtcagcctgggtcccctggagtacca
ggaccagaaggcagtgaaggacgtataggagagcgaggtacccccggagctgatgggaaa
cctggactgccaggacctccaggaccacctggaataccaggcacttcaggacaaaaggga
ccacaaggactgcctgggcttcaaggtgattcgggcctccctggaattcagggcctgcct
ggaataaatggtgtccctggaccaataggacctaagggttcaattgggccaactggtcaa
gcaggaaaccctggcattcctggaaagaagggcagtaaaggtgaaagaggactagttggg
actccaggacatcacggtccaccaggtgaatcagggctacctggaagaaacggaaatcct
gggcctgctggagcaaagggagataaaggttcgttgggtcagcctggaatagatggacct
ccaggcataccgggttttcgtggtgcccctggtctccctggcacagtgggatcaaaggga
gaaagaggaatgcctggacctaaaggagttgtagggccgcctggcctcaagggtgacaat
ggagcaaatggactaccgggagcagaaggacatcaagggccaaagggtatacaaggtgat
tcagggcctccaggaccatcaggactttctggactgaaaggtcaaatgggacacccagga
ttgcctggtttggaaggttctatgggaattcaaggcccaaaggggcacaagggtgacact
ggagatgatggaattaaaggaactcagggggaaaaaggtgaggcaggacaacctggaaac
ccaggaataaggggtcaagaaggcagcaaaggagcaaaaggagagaaaggtgaacttgga
gacataggtgtaaaaggaccagagggtaagaagggagaacatggcatactcggactacca
gggcctcgtggctttccaggtgacagcggtccacagggaaggtctggaatacctggtacc
ccaggaaaaccgggaaaatcaataacagatgaccacattatgaagctgtgtagcaatgtc
ctgcgtgcccagtttccatctttgcttcagaatatgaatccaagctgtccaccatgtgaa
ggaaaacaaggctcaccaggactaccaggcacccaaggccgacctggtgaaagaggacct
caagggtacccaggaagaggaggcagatctggatatccagggatccaagggttaccagga
ccacaagggttaaaaggggatacaggatccaaaggagataaaggttctaaaggagagcgt
ggcataggacagcctggcccacctgggcctgcaggttcccctggaatgaatggtgtaaac
ggagaaggcatcgtaggtcctcctggaaatccaggaaaaaatggggtacccgggaccctg
ggaaaaagaggctttcctgggcctgctggagtatgcgacctttcttcctgtctatctgca
tatggagcaagggatgacccatttagaaaaggacctaatttttga
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