Rana temporaria (common frog): 120943903
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Entry
120943903 CDS
T07929
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120943903 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120943903 (USP40)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120943903 (USP40)
Peptidases and inhibitors [BR:
rtem01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120943903 (USP40)
Ubiquitin system [BR:
rtem04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120943903 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
UAE_UbL
Motif
Other DBs
NCBI-GeneID:
120943903
NCBI-ProteinID:
XP_040213505
LinkDB
All DBs
Position
6:150098290..150180061
Genome browser
AA seq
1213 aa
AA seq
DB search
MFGDLFEEEEDFSFLSNSTTSNGKKAKPKDSEVLEPCGETKLSGLRNQGGTCYLNSLLQT
LLFTPEFREALFALSPEELGSLEDKDVPNSKVRIIPLQLQRLFAQLLLVDQQAALTTDLT
SSFGWDNSEETGQQDVQELNRILFSALESSLEGTSGHNLIKNFYHGTVVNRINCRECGYV
SERQEDFLDLTVAVKGMCSLEESLYNMFVEEEIFYGDNLYRCGACHNLVPAAKSAKLGKL
PPFLTLSLLRFNFDFNKCERYKETSCYAFPARLNIRPFCEQQNLDDALQMYELFSVIIHK
GSCYGGHYHVYIRDVDELGNWGYQEEEKRMPMTGGAGEEQDCPAVTLAVIIAEAGADKML
PLDQLSQKLLEHTGSSWNKVYRKKHGALRKFLQNHPSVFQLSSDGSLVGLAHTENANDPQ
CCKPSSSGKIQAPQRGASHWFDFNDSTVKCIQEREIETQFQGKESAYMLFYRKSQLKRPK
EAKGNAQFGIPDYMIHQMNQINEELKQKRKDSDTEAHRMNLRLHLSSCYHFENGALHPMV
SQGDSTLEISVDRRGTVADLIKTVFELVDKALEGQVLSIAKLLPAGFHIFETLCDVEQSL
SRTGIKDGCDLFVWDGNQVGGLPVHSGPDCTPVLLTIMRPCKDQSNGSSQKYLESQRVFP
SNLNLRAVQNKLSGSPSLESLLCSPSTENSEGWSVFALDDLDKTLNMLGLKDGSSLLLLD
FHDESEMVIATENNSIEDLNLYYIHIQDWCTSAEEKKTVQISVDPNSAVFCVHQKAVELL
ELHEHTGDTCLRPIHRSGRLLPPVPEDVTMQEAELKPGSTLGVFRGKAPGASEIFMSFVL
GTELHEGREQEIILEETLTVKECLQQMLRKASLPIEAGWHLRKMDWCYEAGDPLTEEDSS
LKDLNIQPGDTFVITEGRLPPKGFLKLPVWLYCPQMEQNSVNHVFSCRGALQISQSGDAS
SHEEPDSEYSFVGHVEISKEASVQELKIQVMTLPLFDALGIPSPDFLRVWTLENKRLAKI
LRFNQLQISDHKLGIRTMLCVEPLQVEECLGPQDLLLRVQISVPGEYRYFPPMDIAWNTS
RGCTTSALLQRIATHCALSVDKVEIAKYFSEKHEWLPISSWTQHVSKKKKKKKSENLQGA
PYYLKDGDIIGVKNLLLDDKIDFSSENEYIAKEKQRQRAESKKNIPPSNCNQKVQPSGRK
PESSLSIRVGVFR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggacttgtttgaagaagaggaagatttctcattcctatcaaacagcacaact
agtaatggcaaaaaggcaaaacccaaagattccgaagtactggaaccgtgtggagagacc
aaactaagtggccttaggaaccagggaggtacatgctacctaaactctctgctacagact
ctgctttttaccccagaatttagagaagccctttttgccttgagtcctgaagagcttgga
tccctggaagataaagatgtgccaaattccaaggttcggatcattccattacagttacaa
cgactgtttgctcagcttctcctcgtggatcaacaggccgcattaaccactgacctcaca
agcagctttggctgggataacagtgaggagactggccagcaggatgtccaagagttaaat
cggatactatttagtgccttggaaagctctttggaaggcacctctggtcacaacctcatc
aagaatttttaccatggcactgtagtaaaccgtataaattgccgggagtgtggctatgtt
agtgagaggcaggaagatttcctggacctcacagtggctgtgaagggaatgtgcagcttg
gaggagtctttatacaacatgtttgtggaggaagaaatattttacggtgacaacctttac
cgttgtggagcttgtcacaatcttgtccctgcagctaagtcagcaaagctaggaaagttg
ccaccatttctcactctctctcttctaaggtttaattttgactttaataagtgtgagcgc
tacaaagagacgtcatgttatgccttccccgcccggctaaacatccggcctttttgtgag
cagcaaaacctggatgatgctttacaaatgtatgagctcttttcagttattatacacaag
ggcagttgctatggaggccattatcatgtgtatatccgggatgtggatgaattaggaaac
tggggataccaggaagaggaaaaaaggatgccaatgacagggggtgctggggaagaacag
gactgtcctgctgttacacttgctgtcatcatagcagaggctggagcagataaaatgctt
ccattggatcaactgagccagaaactgctggagcacacaggatcctcttggaataaggtc
tataggaagaaacatggagctctccgtaagtttctgcagaatcatccctctgtctttcag
ttgagctctgatggatctttggtggggttagctcatacagaaaatgccaatgatcctcag
tgctgtaagccaagcagttcaggaaaaatccaagccccacagagaggtgctagtcactgg
ttcgatttcaatgactcaaccgttaaatgtatccaggaacgggaaattgagacacagttc
cagggaaaagagagtgcatatatgcttttctaccgcaaaagccaattaaagagacctaaa
gaagctaaaggcaatgcacagtttggaatccctgactacatgatacaccagatgaaccaa
ataaatgaggaacttaagcagaaaaggaaggattccgacacagaagcccatcggatgaac
ctgcgtcttcacctttcatcttgctatcactttgaaaatggtgctttacacccaatggtc
tcccaaggtgacagcacattggagataagtgtagatcgacgtgggactgtggcagacctg
ataaaaacagtttttgagcttgtggacaaggcattggaaggacaagtgctgagcattgcc
aagcttctgccagcagggttccatatctttgagaccttgtgcgatgttgaacagtctttg
tcaagaacaggaataaaagatggatgtgacctatttgtgtgggatggaaatcaggtcggt
ggtctgcctgtacacagcggtccagactgtacaccagtacttttaaccatcatgcgtcca
tgtaaagaccagagcaatggctcctcacaaaagtacttggagagccagagagtcttccca
tcgaatttaaacttgagagccgtgcaaaacaagttgtctggtagtccgtcactggagtca
ctgttgtgctctccatccacagaaaatagtgaaggctggagtgtttttgcattggatgac
ttggacaaaacccttaacatgttggggcttaaggacggaagttctctgctgctgttagat
ttccatgatgaaagcgaaatggttattgctacagaaaacaattcaattgaagatctgaac
ctttactacattcacatccaggattggtgtacatctgcagaagaaaagaaaaccgttcaa
atatctgtagatcctaactctgctgtgttttgtgtccaccagaaagctgttgaattgttg
gaattacatgagcatactggtgatacctgcctaagacccatccacagaagtgggcgattg
cttccaccagtgccagaggatgtcacaatgcaagaggcagaacttaaacctggaagcacc
ctgggagtgttcagaggaaaagcacctggtgcctcagaaatcttcatgtcctttgttctt
ggcactgaacttcatgaaggacgagagcaagaaattatcctggaagaaacactaaccgtg
aaagagtgtttacaacaaatgcttcggaaggcgagtttaccaattgaagctggctggcac
cttaggaaaatggactggtgttatgaagctggagatcccctaactgaagaagactcttca
ctgaaggatttaaacatacaacctggagacacatttgtaattacagagggaagactccca
cccaagggatttctaaagttacccgtttggttgtactgtccacaaatggaacagaattct
gtcaatcatgtcttcagttgccggggagccctgcagatatctcaatcaggggatgcttct
tctcatgaagagccagactctgaatattcttttgtgggtcatgtagagatatccaaagag
gcttctgttcaagagcttaaaattcaggttatgactctaccactttttgatgcccttggc
attccttctcctgattttcttcgtgtctggactttagaaaacaaacggttggcaaaaata
ttgcgcttcaatcaattgcagatcagtgaccacaaactgggaatcaggacaatgctgtgt
gtggagcctctgcaggtagaggagtgtcttggcccccaggatctgctcctgagagtccag
atttccgtgccaggagaatatcgatattttcccccaatggacattgcatggaatacctct
cgtggatgtaccacctcggctcttcttcagagaattgccacccactgtgcgctttcagtg
gacaaagtggagattgcaaaatacttttcagagaaacacgaatggctcccaatttcaagc
tggactcaacatgtttccaaaaagaagaagaaaaagaaatctgagaacttgcaaggggca
ccatactatttgaaggatggggatataattggtgtaaagaaccttctactggatgacaag
atagacttcagctcagagaatgaatatattgccaaggaaaagcaaagacaacgtgcagaa
agcaagaaaaatattccaccatctaattgcaatcaaaaagttcagccaagtggacggaag
ccggaaagttctctctccatccgagtgggagtgttcagatag
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