Rufibacter tibetensis: DC20_09995
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Entry
DC20_09995 CDS
T04099
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rti
Rufibacter tibetensis
Pathway
rti00020
Citrate cycle (TCA cycle)
rti00785
Lipoic acid metabolism
rti01100
Metabolic pathways
rti01110
Biosynthesis of secondary metabolites
rti01120
Microbial metabolism in diverse environments
rti01200
Carbon metabolism
rti01210
2-Oxocarboxylic acid metabolism
Module
rti_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rti_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DC20_09995
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DC20_09995
Enzymes [BR:
rti01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
DC20_09995
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ALI99246
UniProt:
A0A0P0C2N3
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Position
2478972..2481734
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AA seq
920 aa
AA seq
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MDRYSYIANAHGAYIDELYKQYQQDPASVDFGWQKFFEGFDFSQTYPNGNGQAATTAAPT
TGAAAGNVPAGEIEKEIQVRNLIYAYRSRGHLRSNTNPVRPRKDRKALLDLKDFGLSEAD
LDTKFQSGSELGLGAATLRDILATLKKVFEGTIGFEFMYIRDPEVLAWFKEKAEKESVAF
NPSVEYKKRILSKLNEAVVFENFLHTKFLGQKRFSLEGGETTIPALDAIIDKGSELGVEE
VVIGMAHRGRLNVLANIMGKTYEQIFSEFEGTAVPDLTMGDGDVKYHMGFSSEVNTPSGG
KVNLKLAPNPSHLEAVNPVVEGFVRAKLDSMYGRDTNKILPILIHGDAAVAGQGIGYEVT
QMAKLEGYSTGGTIHFVINNQVGFTTDFEDARSSIYSTDLAKIIDAPVLHVNGDDPEAVV
FAVRLATEYRQRFHNDIFIDMVCYRRHGHNEADEPKFTQPQLYNLISKHDNPREVYNKDL
IRRGELDAKVAEEMDKEFRQMLQDRLDMVKQKPLPYNYQVLEKEWQELRRSKPEDFNQSP
ETGISAEAIEKVGKALTTLPENFKPLKQIEKLTKERQDMFFGSRSLNWASAELLAYGSLL
LENKIVRMSGQDVQRGTFSHRHAVLHDANTSAAYTNLNHIQEGQQKLQIYNSLLSEYGVL
GFEFGYAMANPNALVLWEAQFGDFANGSQVMIDQFISSTESKWQRMNGVVMLLPHGYEGQ
GPEHSNARPERFLQLAAEYNMYVTQCTTPANFFHMLRRQLATPFRKPCIHMSPKSMLRHQ
NVMSPLEDFMQGSFQEVIGDTFAEAKAVTKVLLCTGKVYYDLLEEQQKTNRKDVAIIRME
QLHPFPQVQLERELSKYPNAQIFWVQEEPYNMGAWTYILSVMRKGIDDVVSRKPSSSPAT
GYNKIHQKEQRAVVEKAFSI
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggatagatactcatatatagccaacgcgcacggagcctatattgatgaactgtacaag
cagtatcaacaagaccccgcctcagtggactttggctggcagaaattttttgaaggattt
gatttttctcaaacatatccaaatggaaatggtcaagcagcaactactgccgcgccaacc
acaggtgcagccgctggtaacgtacctgcaggtgaaatagagaaagaaatccaggtgcgt
aatttaatttacgcttaccgttcacgtggtcacttgcgctctaacacgaacccggttcgt
ccgcgcaaagaccggaaagccttgttagacctgaaggacttcggtctgtctgaggctgat
ttagatactaaattccagagcggatctgagctgggcttaggtgccgctacgttgcgtgat
attctggctacccttaagaaagtatttgaaggaaccatcggtttcgagttcatgtacatc
cgggacccagaggttttagcttggtttaaagaaaaagctgagaaagagtcagttgctttc
aacccttcggtagaatataaaaaacgcatcctgtctaagttgaatgaggcagtggtgttt
gaaaacttcctgcacaccaaattcttaggtcagaagcgtttctctctggaaggtggcgaa
accactattccggcgttagatgccatcatagacaaaggctctgaactgggcgtggaggaa
gtggtaattgggatggcgcaccgcggccgtttgaacgtgctggctaatatcatgggcaaa
acctatgagcagatcttctctgaatttgagggaactgccgtgccggatttaaccatgggt
gatggtgacgtgaaataccacatgggcttctccagcgaagtaaacaccccgtctggcgga
aaagtgaacttgaagctggcgcctaacccttcgcacttagaagcggtgaacccagtggta
gaaggtttcgtgcgtgccaagctggactccatgtatggccgtgacaccaacaagattctt
cctatcctcatccacggcgatgcggctgtggccggacaaggtattggttacgaggtaacc
cagatggcaaagttggaaggttacagcactggtggtaccatccacttcgtgatcaacaac
caggttggtttcactactgactttgaagacgcccgttcttctatctacagcactgaccta
gccaagatcattgacgctccggtattacacgtaaacggggacgatccggaagcggtggtg
tttgccgtacgtttagcaactgagtaccgtcagcgtttccacaatgatatctttattgac
atggtgtgctaccgccgccatggtcacaatgaggcagatgagcctaaattcacgcagcca
cagttgtacaaccttatctctaagcatgacaacccaagagaggtatacaacaaggatttg
atccgtcgtggtgagctggacgcgaaagtagctgaagagatggacaaagagttccgtcag
atgctgcaggaccgtctggacatggtgaagcaaaagccattgccttacaactaccaggtg
ctggagaaagaatggcaagagcttcgtcgttctaaaccagaagacttcaaccaatcacca
gaaactggtatctctgccgaggcgattgagaaagtaggcaaggcgttgactacgttgcct
gaaaacttcaagccactgaagcaaattgagaaactgaccaaagagcgccaggacatgttc
ttcggaagccgttctttgaactgggcatcggctgaattgttggcctatgggtcactttta
ttagagaataagattgtgcgtatgagtgggcaggacgtgcagcggggtactttctcgcac
cgtcatgcggtgttgcatgatgctaataccagcgctgcttacactaacctgaaccacatt
caggaaggtcagcagaaactgcagatctataactctttattatctgagtatggcgtactg
ggctttgagttcgggtatgccatggcgaacccgaatgccttggtgctttgggaagcgcag
ttcggtgatttcgccaacggctctcaggtaatgattgaccagttcatctcatctactgaa
tctaagtggcagcggatgaacggcgtggtcatgttgttgccacacggctatgaaggccag
gggccggagcactctaatgctcgtcctgagcgcttcctgcagttggctgcggagtacaac
atgtacgtgacccagtgtactacaccggcaaacttcttccacatgctgcgtcgccagttg
gctacgccgttccggaaaccttgtattcacatgtcgcctaagtctatgctgcgtcaccag
aacgtgatgtcgccgctggaggatttcatgcaaggttctttccaggaagtgattggcgat
acctttgccgaggcaaaagctgtaaccaaagtgttgctgtgtactggtaaagtgtactat
gacttgttagaggaacagcagaaaactaaccgcaaagatgtagccatcatccggatggag
cagctgcatccgttcccgcaagtacagttagaacgtgagttgagcaaatatcctaatgca
caaatcttctgggtacaggaagaaccgtacaacatgggtgcctggacgtacattctaagc
gtaatgcgcaaaggcattgatgacgtggtttcccgtaagccaagttcatcgcctgctact
ggttacaacaaaattcaccagaaagagcagcgtgccgtagttgaaaaagcattcagcatc
taa
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