Rufibacter tibetensis: DC20_13580
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Entry
DC20_13580 CDS
T04099
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
rti
Rufibacter tibetensis
Pathway
rti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DC20_13580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rti03400
]
DC20_13580
DNA repair and recombination proteins [BR:
rti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DC20_13580
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DC20_13580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ALI99813
UniProt:
A0A0P0CTA6
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All DBs
Position
3310285..3310893
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AA seq
202 aa
AA seq
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MNFPSKLIENAVEELAKLPGVGKKTALRLVLHLLKAETEDTKQLSEALVRMRTGIRYCKT
CHNISDMEVCGICSNPLRDRSLLCVVSDMRDVIAIENTAQYKGVYHVLGGVISPLEGVGP
SDLHIQSLVERLPSSGVKEIILALSPTMEGDTTAFYLTRKLKEYPARISSIARGVPVGGE
LEYTDEITLGRSILDRTAYSQI
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcccttctaagctgattgaaaatgcggtagaagagttggcgaagttacctggc
gtgggcaaaaagactgccctgcgtttggtgctgcacctgctcaaagccgaaaccgaagat
accaaacaactttctgaggccctggtgcgcatgcgtaccggcatacgttactgcaaaacc
tgccataacatttctgacatggaggtatgcggcatctgttccaatccgctccgtgaccgt
tccctgctgtgcgtggtaagcgacatgcgtgatgtaattgccattgagaacacagcccag
tacaaaggcgtgtaccatgtgctgggtggcgtgatttctccgctggaaggcgttggcccc
tcagacctgcacattcagtctctggtggagcgcttgccaagctccggggtaaaagagatt
atcctggcgctcagccccaccatggaaggcgataccacggccttttacctaacccgtaaa
ttgaaagaatatccggcccgtatttccagcattgccagaggcgtgccggtaggtggggag
ttggagtacactgatgaaattaccttaggccgaagcattctagaccgtaccgcttacagc
cagatttaa
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