Rhodococcus triatomae: G4H71_07920
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Entry
G4H71_07920 CDS
T06846
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
rtm
Rhodococcus triatomae
Pathway
rtm00550
Peptidoglycan biosynthesis
rtm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G4H71_07920 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtm01002
]
G4H71_07920 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtm01011
]
G4H71_07920 (dacB)
Enzymes [BR:
rtm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
G4H71_07920 (dacB)
Peptidases and inhibitors [BR:
rtm01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
G4H71_07920 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rtm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
G4H71_07920 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
PQQ
Motif
Other DBs
NCBI-ProteinID:
QNG25612
LinkDB
All DBs
Position
complement(1692853..1694196)
Genome browser
AA seq
447 aa
AA seq
DB search
MRILLATIAVVAVAIAAVVIAVDRTRGTGDAVSALPTPPLVTAAPQVVPLPGGAPAPTPA
GLAAALGPAAANPDLGSFSGTVSDAETGQELWSVGPESPKLPASTTKVLTAAAALLTLPG
DQRVPTTLVEGDEPGRIVLVAGGDPTLTAMPPGTSGYYPGAARVSDLVEQIRSQGVQPTS
LVVDTGIYSGPAMASGWFPEDVGAGFITPTEPVMIDGGRLDPLRDESPRSPSPALDAGRT
IASALGIDPATVVAGSAAEGANVLAEVRSAPLRDRLQQMMEHSDNVLAEAIGREIAIHAG
AAGSFDGAAAAIGQALYTAGFDMTGLVMHDASGLSVDDRVTPRLLDQILTAAAAGEHTEL
RPMLDYLPVAGSTGSLSDRYASGNRDGAGWVRAKTGTLSEASGLAGYVVDQSGRVLTFAL
LSNGRPPHESRPALDALAATLRNCGCT
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctcctcgcgacgatcgcggtggttgccgtcgcgatcgcggcagtcgtcatc
gccgtcgaccggacgcgcggtaccggggacgcggtctcggcactgcccaccccgccgctc
gtcaccgcggcgccgcaggtcgtccccctgccgggtggcgcccccgcgccgactcccgcc
gggctcgcggccgcgttgggtccggcagcggccaaccccgacctcgggtcgttcagcggc
accgtgagcgatgccgagaccgggcaggagctgtggagcgtcggccccgagtccccgaaa
ctcccggcgtcgaccacgaaggtgctcaccgccgccgcggccctgctcactctccccggc
gaccagcgggtgccgaccacactcgtcgagggggacgaaccggggcggatcgtgctcgtc
gccggcggcgaccccaccctgaccgcgatgccgccgggcacctccggctactacccgggt
gccgcgcgagtctccgatctggtggagcagatccggtcccagggggtgcaacccacctcg
ctcgtcgtcgacaccgggatctacagcggacccgcgatggcgtccggctggttccccgag
gacgtcggagcgggcttcatcacccccaccgagccggtgatgatcgacggtggccggttg
gacccgctccgcgacgagtcgccgcgcagtccgtcaccggcactcgacgccggccgcacg
atcgcgtcggcgctgggcatcgaccccgcgacggtcgtcgccggttccgcagcggagggc
gcgaacgtcctcgccgaggtgcgatcggccccactgcgtgaccgactgcagcaaatgatg
gaacactcggacaatgtgctcgccgaggccatcggtcgcgagatcgcgatccacgccggc
gcggccgggtcgttcgacggcgccgccgcggcgatcggccaggccctctacacggcgggt
ttcgacatgaccggcctcgtcatgcacgacgccagcggtctgtcggtggacgaccgggtc
acaccgcggttgctcgaccagatcctcaccgccgccgccgcgggtgaacacaccgaactg
cgccccatgctcgactacctgcccgtcgccggttccaccggcagcctctccgaccggtat
gcctccgggaaccgggacggtgccggctgggtgcgggccaagaccggcaccctctccgag
gccagcggactggcgggctacgtcgtcgaccagagtggtcgggtcctgaccttcgcgctg
ctctccaacggacggccaccacacgagagcaggcccgcgctcgacgcgctcgccgcgacg
ctgcgcaactgcgggtgcacatga
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