Rhincodon typus (whale shark): 109912206
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Entry
109912206 CDS
T06055
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
DUF2681
Motif
Other DBs
NCBI-GeneID:
109912206
NCBI-ProteinID:
XP_048457248
LinkDB
All DBs
Position
9:46488529..48055733
Genome browser
AA seq
1510 aa
AA seq
DB search
MAVVIKKKGHLLWFGLLFGCLVNLGVSLEFTGAAGQWARFPKWNACCESEMSFNMKTNIS
SSLLVYFDDEGFCDFLELLIVDGYLQLRFSIFCAEPAVLQSDTKVNDSIWHTVVIQRNFR
KTTLIVDKEIKTVEVKSKRRDMTVFSKLYIGGIPPEFHSSVLSLTSTSVGSQEPFQGLIT
DLKVGNGTTTLIDGQGIKMDENYLCTNHSLCLNGGTCSVVQEKAICDCSHTGFQGKDCSE
EDNYVEGLAHLMMGDQGKIKGVISSNIYRTGREEYVATFKGSEYFCYDLSQNPIQSSSDE
ITLSFRTLQRNGLMLHTGKSADYVNLALKDGAVSLVINLGSGAFEALVEPVNGKFNDNAW
HDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPG
SPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDQKMKIHGMVAFKCENVATLDPITFETP
ESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKNPRIVKVDFFAIEMLD
GHLYLLLDMGSGAIKTKATQRKVNDGEWYHVDFQRDGRSGTITINSKRSPYMAHGESEIL
DLDDDLYLGGLPENKAALIFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRRMAEIQNVAG
VKPSCAKEGPKQCLSNPCRNNGVCREGWNRYICDCSGTGFLGKSCEREATILSYDGSKFM
KIQLPVVMHTEAEDVSLRFMSQRAYGILMATTSRDSADTLRLELDGGRVKLTVNLDCIRI
NCNNSKGPEMLFAGQNLNDNEWHTVRVSRRGKSLKLIVDELQPIEDQMTGDHTRLEFHNI
ETGIVTERRYMSNIPSNFIGHLQSLMFNGMPYIDLCKNGDIDYCELNARFGLKNIIADPV
TFKTKSSYVALSTLQAYTSMHLFFQFKTTSADGLILFNSGDGNDFIVIELVKGYLHYVFD
LGTGPSLIKGNSDKPLNDNKWHNVLISRDASNLHTVKINSKLITQNTVGARNLDLKGDLY
IGGIAKDMYKTLPKLVASREGFQGCLASVDLNGRLPDLISDALYCNGQIERDCEVAMMKA
DLQGPSTTCQEDSCGNQGVCLQQWDGFSCDCSMTSYTGTLCNDPGTTYIFSRGGGLITYT
WPPNDRPSTRADRLAVGFDTHVKDAILVRVDSSAGLGDYLQLHIKQGKVRQVFFPHSVTP
DITCEQSNGVANGGKYHALLFTTSHSLVTIQIQHWPIVEFYPNGNNDNERLAIARQRIPY
RLGRVVDDWLLDKGRQLTIFNSQATIKIGGKDKDRPFQGQLTGLYYNGLKVLNMAAESDP
NIRIEGNVRLVGEASSMTTETTTTSKPAEISTTIMETTTTMATTTTRKGRSTTTRDVMTQ
STDDLLVASAECPSDDEDIDECEPSSGGLANPTGPGGRGFPGTAEVIRESSSTTGMVVGI
VAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQVNNAKTSSKN
KKNKDKEYYV
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtcatcaagaagaaaggtcatttgctttggttcggcttgctttttggatgt
cttgttaaccttggggtcagtttagaatttactggagctgcaggacagtgggcaaggttc
ccaaagtggaatgcatgctgtgaaagtgagatgagttttaatatgaagaccaacatttcc
agtagtctactggtttactttgatgatgaaggattctgtgattttctagaactcctaatt
gttgatggataccttcaacttcgcttttcaattttctgtgctgaaccagctgttctacag
tcagatactaaagtgaatgatagtatttggcacactgtagttattcagaggaatttcagg
aagacaacattaatagtagacaaagagatcaaaacagttgaagtgaagtcaaagagacga
gacatgacagtctttagcaaattatatattggtggaattccaccagaatttcattcatcg
gtactatcattaacatcaacatcagtaggaagtcaagaaccattccagggattaataact
gacctcaaggttggaaatgggactacgacactcattgatggtcaaggaatcaagatggat
gaaaattatctttgcacaaatcacagtctatgcctaaatggaggaacttgctctgttgta
caggagaaggcaatctgtgattgttcccacactggctttcaaggaaaagactgcagtgaa
gaagacaactatgttgaaggtctggcgcacctgatgatgggcgaccaaggtaaaataaaa
ggagttatctctagcaacatctacaggactggaagagaagaatatgttgcaacatttaaa
ggatcagaatacttctgctatgacttgtcacagaacccaatccagagtagcagtgatgaa
ataacattatcattcagaacccttcaaaggaatggtctaatgcttcatacagggaaatct
gcagattatgtaaatctggctttgaaagatggtgctgtctcactggtcattaatttgggg
tcaggagcctttgaagctttggtggaacctgtgaatggaaaatttaatgacaatgcctgg
catgatgtgaaagtaacccggaacctccgtcagcactcaggcatcggacacgctatggta
acaatctcagtagatggaatactgacaacaacgggctacacacaggaggattacaccatg
ctaggctctgatgactttttctatgtcgggggcagtcctagcactgctgatcttccaggt
tcaccagtcagcaataattttatgggttgcctaaaggaggttgtttacaaaaacaatgat
gttcggttggaattatcacggctcgcaaaacaaggagatcagaagatgaagattcatgga
atggtggccttcaaatgtgagaacgttgcaacactagatccaatcacatttgaaacccct
gaatcttttatctcgttaccaaagtggaatgctaaaaagacgggctctatttcatttgac
tttcgtaccactgagccaaatggactgattctttttagtcacggcaaaccacgacaccaa
aaagatgccaaaaatccccgaatagtgaaggtcgacttctttgctattgaaatgcttgat
ggacacttgtaccttcttctagacatgggatctggtgctattaaaacaaaagccactcaa
aggaaggtgaatgatggagagtggtatcacgtggattttcagagagatggacgatcaggt
actatcaccattaacagcaagcgttcaccatatatggcacatggggagagtgaaattctg
gacctggatgatgacttgtatttaggtggactacctgagaacaaagcagctcttattttc
cctacagaagtatggacagctcttcttaactatggatatgtaggatgtatcagagacttg
ttcattgatggccaaagcaaagatatacggagaatggctgaaatccaaaatgtggctgga
gttaaaccttcatgtgcaaaagaaggtccaaagcagtgccttagtaatccatgccgaaac
aatggtgtttgtagagaaggctggaacaggtacatttgtgattgctctggaactggattt
cttggcaaatcttgtgagagagaagcaacaatactgagttatgatggaagcaagtttatg
aaaatccagctacctgttgtaatgcacacagaagcagaggatgtatcattgcggtttatg
tcccaaagagcatacggaatcttaatggcaacaacttcccgagattcggcagatactctg
agactggaacttgatggtggtcgtgtcaaactaactgtcaacctagactgtatcaggatt
aactgtaataacagcaagggtccagaaatgctttttgctggacaaaatctcaatgacaat
gaatggcacactgttcgtgtaagtcgccgaggaaagtccctgaagctgatagtggatgaa
ctacaacctattgaagatcaaatgacaggagatcatacgcgcctcgagttccacaatatt
gaaacaggcatagtgacggagagacgatacatgtcaaacatcccttcaaatttcattggt
catttacagagcctaatgttcaatggcatgccttacattgacttgtgcaaaaatggtgat
atcgactactgtgagctcaatgccagatttggtttaaaaaatattattgctgaccctgtg
accttcaagacaaagtccagctatgtagcactgtccacgttgcaagcctacacctccatg
catctgttcttccaattcaagaccacatcagctgatggactgatactgttcaacagcggg
gatggcaatgatttcattgtgattgaactcgttaaagggtacttacattatgtattcgat
ttaggtactggcccttccctcattaaaggtaactctgacaaaccactgaacgataataaa
tggcacaatgtgctgatttcaagggatgcaagcaacttgcacactgtgaagattaactcc
aaactcatcactcaaaacacagtcggagccagaaatctcgatctgaaaggagacttgtat
attggaggaattgccaaagacatgtacaaaacattaccaaagctggtggcatcgagggag
ggatttcaaggctgcttggcttcagtagacctgaatggacgactacctgacctaatttct
gatgctttgtactgcaatgggcagattgaacgggactgtgaagttgcaatgatgaaagct
gacttgcaaggaccaagtacaacctgccaagaggattcctgtggaaaccaaggtgtctgt
cttcagcagtgggatggcttcagctgtgactgcagtatgacatcctatacgggaaccctg
tgcaatgaccctggcacaacatacatctttagccgaggtggtggactaatcacttataca
tggccccctaatgacagaccaagcacccgagcagacagactggctgtgggatttgacaca
cacgtaaaagatgccattttggtgcgtgtagatagttctgcagggcttggagactaccta
cagcttcacattaagcaaggtaaagtgaggcaagttttttttccccactcagtaactcct
gacatcacctgtgagcaatcaaatggagtggcaaatggtggcaagtaccatgctcttctc
tttactacctcacactcattagtgactatccagatccaacactggccaattgtggagttt
taccccaatggaaacaatgataacgaacgcctggcgattgctagacagcgaatcccatat
cgacttggtcgagtagttgatgattggctactcgacaaaggacggcaacttacaatcttc
aatagccaagcaactataaaaattggtggcaaggacaaagatcgtccattccagggacag
ctaactggcctgtactacaatggcttgaaagtacttaatatggcagctgaaagtgaccca
aacatcagaatagaaggaaatgtgagattagtaggggaagcatcctcaatgacgacagaa
acaacaacaacatcaaagccagcagaaatatcaaccaccattatggaaactacaaccacc
atggccactactaccaccagaaaaggaaggtctacaaccacaagagatgtcatgactcag
agcacagatgatctattggttgcatctgctgaatgtccaagcgatgatgaggacattgat
gaatgtgagccaagctcaggtgggttagcaaaccccaccggaccaggtggcagaggcttt
ccaggaacagcagaagtgattcgggaatcgagcagcaccacaggaatggtggttgggatt
gtggcagcagctgctctttgcattctcatcctcctgtatgctatgtacaagtacaggaat
agggacgaaggctcctaccatgtggatgagagcagaaactacatcagtaactccgctcag
tccaatggggctgttgtgaaagagaagcaggtgaacaatgccaaaacctccagcaaaaac
aagaagaataaggataaagagtactacgtctga
DBGET
integrated database retrieval system
