Rhincodon typus (whale shark): 109913218
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Entry
109913218 CDS
T06055
Symbol
ctsd
Name
(RefSeq) cathepsin D
KO
K01379
cathepsin D [EC:
3.4.23.5
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04140
Autophagy - animal
rtp04142
Lysosome
rtp04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109913218 (ctsd)
04140 Autophagy - animal
109913218 (ctsd)
09143 Cell growth and death
04210 Apoptosis
109913218 (ctsd)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109913218 (ctsd)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109913218 (ctsd)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.23 Aspartic endopeptidases
3.4.23.5 cathepsin D
109913218 (ctsd)
Peptidases and inhibitors [BR:
rtp01002
]
Aspartic peptidases
Family A1: pepsin family
109913218 (ctsd)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109913218 (ctsd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp
TAXi_N
A1_Propeptide
TAXi_C
Motif
Other DBs
NCBI-GeneID:
109913218
NCBI-ProteinID:
XP_020368288
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Position
17:22156975..22187561
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AA seq
417 aa
AA seq
DB search
MIFIRVDINRSCADLLAATMKLGAELWLLLWAAFAVCNGLLRIPLRKFRSIRQTFSDSAN
SIEELVAGDQSSKYNLGSPQSKGPTPETLKNYLDAQYYGEIGIGTPPQIFTVVFDTGSSN
LWVPSIHCSITDIACLVHHKYNSDKSSTYAKNGTQFAIQYGTGSLSGYLSQDTITIGDIK
IQNQLFGEAIKQPGAAFIAAKFDGILGMAYPQISVDGVDPVFDNIMRQKLVQKNVFSFYL
NRNPDTQPGGELLLGGTDPKYYTGEFFYLNVTRQAYWQVQMDDIAIGETLVLCKGGCSAI
VDTGTSLITGPAMEIQALQKSIGAIPLIQGQYKVDCDKVASLPPINFRLGGRTFTLTGEQ
YILKEKQIGMTVCLSGFMALDIPPPVGPMWILGDVFIGQYYTEFDRDNNRVGFAKAV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatttttatccgtgtcgacataaacaggagctgtgcggatcttttagctgctactatg
aagttgggagcggaattgtggctgttgctgtgggcagcatttgctgtctgcaatgggctt
ctgcgaattcctttgagaaaatttcgctccattcgacaaaccttctctgattctgcaaac
agcatcgaggaacttgttgcaggagaccaatccagcaaatacaatttgggctccccacaa
agcaaggggcccactccagaaacgctgaaaaactacctggatgcacagtactatggagag
attggtattggaacaccacctcaaatcttcactgtggtttttgacactggctcctccaac
ctctgggttccttcaattcattgttctataactgacattgcatgcttggtgcatcataag
tataattctgacaagtctagcacgtacgcgaagaatgggacccaatttgctattcagtat
ggtactggcagcctatccggataccttagccaggacaccattacaattggtgatattaaa
attcagaaccagttgtttggtgaggccatcaaacagcctggtgcagcctttattgctgcc
aaatttgatggaattcttggcatggcctacccacaaatatcagttgatggtgttgatccg
gtgtttgacaatatcatgaggcagaaactggtgcaaaagaatgtgttttctttctacttg
aacaggaatccagacactcaacctgggggtgagcttctgttgggtggcactgatcccaaa
tattacactggagagttcttctacttgaatgtcacccggcaagcgtattggcaagtccaa
atggatgatattgctattggtgagaccttggtcctttgtaaaggaggctgttcagctatt
gtggacacgggaacatctttgatcactggacctgctatggaaattcaagccctacagaaa
tccattggagctataccacttattcaaggccagtacaaagttgattgtgataaagttgcc
tcacttcctcccatcaacttccgcctgggagggcggacctttactctgactggagagcag
tatatcctcaaggaaaagcaaattggcatgaccgtctgcctgagtggattcatggctctt
gacattcctccgccagttggtccaatgtggattcttggagatgtctttattgggcagtac
tatacagagtttgaccgggacaacaatcgagttggatttgcaaaggctgtgtaa
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