Rhincodon typus (whale shark): 109914551
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Entry
109914551 CDS
T06055
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
Ank_2
Ank
EGF_CA
Ank_5
Ank_3
Ank_4
EGF_2
EGF_3
JAG1-like_EGF2
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
109914551
NCBI-ProteinID:
XP_048457971
LinkDB
All DBs
Position
10:4885249..5062101
Genome browser
AA seq
1629 aa
AA seq
DB search
MVLVCASSTPPSSGISRSLPAKHGTDLPVPDMLGQMSGTVQASSGLTVFVQVNIVLLKIQ
QVPALHLSSLSRCQSGFVGEYCQHSDPCQISTCLHGGTCRTSITEGKLQRLCHCVLGYTG
ERCETTVTNVCLNNPCQNKGTCRLITLEKYECDCQQGWIGSRRFRLPPFFRTKPSGNHSG
PSLRLRLAATTPIIRIRMMIPTATIKRQLPREKEPWATVQNLNVLAGFQGGLAVEVVEQT
LWSVAGLIALIVVEVVPALQALGAVLPRFQDSVPGLLLAQWQLTALPRQLSASQPPVLQG
ALAAEERRRGLWEAGSAVVAQPGRAGFAGNMCQIDIDECASTPCQHGAKCIDRPNAFECD
CSEGFTGTTCEINENDCDPDPCHYGTCEDGIAGYTCNCKAGYKGPICSEQIDECQSSPCQ
NGGTCQDRVNNYICRCPVGTSGVNCEINYDDCASNPCSYGSCQDGINRYDCVCSPGYTGP
MCNIDINECASNPCHNGGTCFDHMNGFTCRCPEGFHDPHCISEVDECKSSPCIHGKCVDD
VNSYQCVCEAGWAGINCDVDKDECESNPCQEGGTCENLINGYKCTCVKGFKGSDCQININ
ECASNPCLNKGVCVDGVNSYHCVCSLPYTGKDCEFVLAPCSSQPCENGGICNETEDYENY
MCTCTMNWQGQRCSVDVDECVTDPCKNGASCQNTPGSYECQCLPGYIGANCETNVDDCSP
NPCQNGGSCIDGVNTFSCSCLSGFTGSKCQQEINECLSNPCLNGGNCSDYVNSYVCKCPE
GFNGIHCENNMPDCTESSCFNDGTCIDGINSYTCRCQPGFTGSNCQFDIDECDSKPCQNG
ATCVDGLGGYRCTCPSGYSGNNCQQGPAFVAVTPSVFDVPSVFNESGIENLSKPVPDDSM
IDDKQNEQWMEGGGPEAKKPKTEDQALLPEIEDQVDRRPWTQQHLVAADIRLTPSLALTP
PQAEQDAESMDVNVRGPDGFTPLMLASLRGGGLDTGIEEEEDTEDTSANVITDLIYQGAS
LHSQTDRTGETSLHLAARYARADAAKRLLDAGADANAQDNMGRSPLHAAVAADAQGVFQI
LIRNRATDLDCRMNDGTTPLILAARLAVEGMVVELINCHADVNAVDDHGKSALHWSAAVN
NVDATQALLKNGANKDMQDNKEETPLFLAAREGSFEAAKILLDHFSNRDITDHMDRLPRD
IAQERMHHDIVQLLDEYNLVRSPQGPAGPMMGPTVSPVTCSTGSSFMNLKMNPMGKKARR
PSTKSLAAGNAKDSKDAKTRRRKRSIGNDKGAIVEGSLTLSPVESLESPHTYLATTSPPV
LTSSGVLHQSPPASLHPSTPVQSQLAMSFSNLTEMKGMNMDSNTVLSQVLPSMSHPSMAG
QSSSLGLPLGRVEHVNMQSEWMNRVGITTSQYNPMLGVMQHVSGSYPNMQQQNAVLQANL
PQVHMTMLREQLPQILTYQPMNNAASQSVMQQQQQQSAQVTQQQGQPYCGSMTPGPVGNM
HQMPEIVQLPNGQLNSSMLSASQEGQVPQTTLPPYHKLPSSVQIDKYPTPPSQHSYVSAT
DNTPNHNVHLQSEHPYLTPSPESPDQWSSSSPHSTSDWSDITPSPAPIGQRPQVSHIPEQ
QRNNMQVFA
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggtcctggtttgtgcctcgtccacaccaccatccagcgggatctccagatccttgccc
gcaaagcatggcaccgatctccctgtgcctgacatgttggggcaaatgtcaggaactgtg
caggccagttcaggattgacagtgtttgtccaggtgaacatcgtgcttttaaagatacaa
caggtgccagctctgcacctctcttctctctctaggtgtcagtcaggatttgtcggtgaa
tactgccagcattcagacccctgccagatttcaacctgcctccatggagggacatgccgc
acttcaatcacagaagggaaattacagagattgtgtcactgtgttttgggatatacgggt
gagcggtgtgagacaactgtcaccaatgtctgtctgaacaatccttgccaaaataaagga
acctgccgtctcattaccctcgagaagtatgaatgtgattgccagcaaggatggataggc
tcacgacgcttccgattgccacccttcttcaggacaaagccctctgggaaccacagcggg
cccagcttgcgcttgcgtttagctgctacaacacccattatcaggataaggatgatgatc
cctacagcaaccatcaaaagacagctacccagagagaaagagccctgggccacggtgcag
aatttgaacgtacttgcaggttttcagggtggactggcagtcgaagttgtcgaacagaca
ctctggagtgttgcaggcctcatcgcactgattgttgttgaagtagttccagcattgcag
gctctcggtgcagttctcccaaggtttcaagactcggtccctggccttctccttgcacag
tggcagctgacagctcttcctcgccagctcagtgcatctcagcccccggtactgcagggg
gcactggcagctgaagaacggcggcgtggactttgggaggcaggttccgccgttgtggca
cagcctggcagagcaggttttgcggggaatatgtgccagattgacattgatgagtgtgcc
agcacaccatgccaacatggagccaagtgtattgatcgtccaaatgcttttgaatgtgat
tgcagtgaaggctttacgggaactacctgcgagattaatgagaatgattgcgacccggat
ccctgccactatggaacgtgtgaggatggaattgccgggtacacctgcaactgtaaagct
ggttacaagggtccaatctgtagtgagcagatcgatgaatgccagagtagtccatgccag
aatggtggcacctgccaagatcgtgtgaacaactacatatgccgctgtcctgttggcacc
tccggtgtcaattgtgagattaactatgatgactgcgcgagcaatccatgtagttacgga
agctgtcaagatggtattaatcggtatgactgtgtatgcagccctggctatacaggtccc
atgtgcaacattgacatcaatgaatgtgcatccaacccatgtcacaatggaggcacgtgt
ttcgatcatatgaatggcttcacatgccgctgccctgagggcttccatgatcctcactgt
atatcggaagtcgatgagtgcaagagtagcccttgtattcatggcaaatgtgtggacgat
gtcaacagttaccagtgcgtttgtgaagctggttgggcaggaatcaactgtgatgtggac
aaagacgagtgcgagtcaaatccttgtcaggagggaggaacctgtgagaacctaatcaat
ggctataagtgcacatgtgtgaagggattcaaaggctccgactgtcaaatcaacataaat
gaatgtgcgtcaaacccctgcctgaacaaaggagtctgcgttgatggagtgaattcctac
cactgtgtctgctctctcccgtacactggtaaggattgtgagtttgttcttgctccgtgt
tcctcccagccatgtgaaaatggaggtatatgcaacgaaactgaggactatgagaattac
atgtgtacctgcacgatgaattggcaaggtcagagatgctcagtggacgttgatgagtgt
gttactgatccatgtaaaaatggtgcttcttgtcaaaatacccctgggagctacgagtgc
cagtgcctccctggctacattggagcgaactgcgagacaaatgtcgacgattgcagccct
aatccatgccagaacggaggttcctgcatcgatggtgtcaacacattctcgtgcagctgc
ctgtcggggttcaccggtagtaaatgccagcaggagataaatgagtgcttgagcaacccg
tgtctgaatggcgggaactgctctgattatgtcaacagctatgtctgcaagtgccctgaa
ggcttcaatgggattcactgtgaaaacaacatgccggactgcacagaaagctcctgcttc
aatgacggaacctgtatcgacggcatcaattcgtatacctgccgctgccaacctggcttc
actggttccaactgccagttcgatatcgatgagtgtgactccaaaccgtgtcagaatggg
gccacctgtgtcgacgggctggggggttaccggtgcacctgcccttctggctactccggt
aacaactgccagcaaggtcctgcttttgtggccgtgacgccatccgtgttcgatgtgcct
tctgtgttcaatgaatctggcattgaaaatctgtcaaagccagtgccggatgacagcatg
attgatgacaaacaaaatgagcaatggatggagggtggagggcccgaagccaagaaacca
aagactgaagatcaagccctgctcccggagattgaagaccaggttgaccgtcgaccatgg
acacagcagcatctggtggcggcagatatccgtttaacgccatccctggccttaacccca
cctcaagcggagcaggatgctgaaagcatggacgtcaatgttagaggtccagatggtttt
acaccacttatgttggcgtcactacgaggtggcgggctggacactggaattgaggaggag
gaagacaccgaggacacatcagccaatgtcatcactgacctcatataccagggtgccagc
ctccattcccagacggaccggaccggggagacgtctctccacttggctgcacgctacgct
cgggcagatgcggccaagcgtctccttgatgcaggcgccgatgccaacgcccaggataat
atgggtagatcacctcttcacgcagctgtggcagccgatgcacaaggggtgttccagatt
ctgatcagaaaccgggccactgatttggattgccgaatgaatgatggaaccacaccactg
atcctggctgcccgccttgctgtagaagggatggtcgttgagctgattaactgccatgca
gatgttaacgctgtggatgatcatggtaaatcagcacttcactggtcagcagctgttaac
aatgtggatgcaacccaggccctcctgaagaatggagccaacaaagacatgcaggacaac
aaggaggagacacccttgttccttgctgcgagggagggcagttttgaagctgccaaaatc
ctactggaccatttctctaatcgtgacattactgaccacatggacagactccctcgtgac
atcgcgcaggagcgaatgcaccatgacattgtgcaactcctggatgagtacaaccttgtc
cggagcccacagggccctgctggacccatgatgggacccactgtgtctccagtgacctgc
tcgactggtagttcttttatgaacctcaagatgaatcccatgggcaagaaagcaagacgg
ccaagcaccaagagcctcgctgcaggcaatgctaaagactctaaagatgccaaaaccagg
aggcggaaaagatccatcggcaatgataaaggggccattgtggaaggttcactgactctg
tccccagttgagtcgctggaatccccacatacctacttagccaccacatctccaccagta
ctcacatcatcaggggttttgcaccaatctccaccagcatctctccacccatccactcca
gtgcagagccagctggccatgtcgttctccaacctaactgaaatgaaaggtatgaacatg
gactccaacacagtgttgagtcaggtcctcccctccatgtctcatccttccatggctggg
caaagcagcagcctggggttgcccttaggaagggttgaacatgtaaacatgcaatcagag
tggatgaacagggtgggaatcacaacttcccagtataaccccatgctcggcgtcatgcaa
catgtctctggctcctacccaaatatgcaacagcagaacgcagtgcttcaggctaacctg
cctcaagtacacatgaccatgctcagggagcagttaccacagatactcacctaccagccc
atgaacaatgctgcatcacagtcggtcatgcagcaacagcagcagcaaagtgctcaagta
acacagcagcaggggcaaccttactgtggatcaatgacgccagggcccgttggtaacatg
catcagatgccagagatcgtccagctgccaaatggacaactgaacagctccatgctgtcc
gctagccaagagggtcaggtaccacagaccaccctaccgccctaccacaagctaccaagc
tcagtgcagattgataagtaccctacgccgccgtctcagcacagttatgtttcagcaaca
gacaataccccgaaccacaatgttcacctccagagcgagcacccttacctaacaccttct
cccgaatcccctgatcagtggtccagctcgtcaccgcattccacatccgactggtcggac
atcacacccagccctgctccgatcggacagcggccacaggtttcacacattccagagcag
cagaggaacaacatgcaggtgtttgcctga
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