Rhincodon typus (whale shark): 109917226
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Entry
109917226 CDS
T06055
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtp01001
]
109917226 (lrrk1)
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109917226 (lrrk1)
Protein kinases [BR:
rtp01001
]
Serine/threonine kinases: TKL group
LRRK family
109917226 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
COR
Roc
LRR_4
Ank_2
Ank_4
Ras
Arf
LRR_6
Gtr1_RagA
TniB
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
109917226
NCBI-ProteinID:
XP_048471903
LinkDB
All DBs
Position
33:complement(1077520..1269293)
Genome browser
AA seq
1987 aa
AA seq
DB search
MYWDVGHEDNPEDNMAPGTDTVPEIMGSKQSGLGGLPIEQCPTLKNIQAAYSAGEVERAQ
QLARLHLEANYQVEKLLGVIAAHGDTEMLQYLLQETGMELSKELNDGNPAIIAAHQGHEE
VIKVLLNSTSDLYVDKDLLNWMLAVACEKGHLDVVRLLVLVYKAETDSCGVKTQDHPIIT
GQPLYAAMKAGNEEIAGFLLDNGACFSSYVLLDHPELSNRLLRKQFTEPSSQYEVSDRQT
GLSLKWSCLKLPWLELDWFIDVSNRITELDLCRNSLTFLPSVIPWGLVHLKKLNLSANQL
KDLPNVTSSEEILCLGILEIDVSRNQLSCLPTGFLHLPKLEKLTAYANLLEMLFDEEKAT
NWIGLRKLQEIDVSDNKLQLLPSTFLHCCKSLSRLKASQNTLKDFPEPWACPLKFCNVSG
NFLKSLPNTLSIFWKNYLKEANFSDNLLKDVPANIFELKNLSSLKLSGNQIQSLPPVDKW
QCSNLKSLDLSRNHLGKSEEGVRTRKAFFTTWLKKTSDTVSPVEFPQFLGECLEVLHLDN
NFLDSVPQSVCWLRSLSELYLSNNPGIRELPAELGQLANLWQLDIDQLNISNVPTEIRNE
GPSSILTYLRAQLRKAEPCKLMKMIIVGPPRQGKSTLLETLQSGKPTQSMSKESSIQTTN
WELLRPANVKTKVDSVVFNVWDVGGTAIMSTVNQCFFTDKALYVVVWNLALGEEAVANLQ
SWLLNIEAKAPNATVIVVGTHLDLIDTKFRSERIATLRAYVLALCRSPSGPRATGYPDIS
CRNLHEISCKTLDGLEGLRKLIFQVACSMKNTGNLTASQRLVGRLIPKSYFNLLNAVLKE
QQRRSSSNEVQYLTDQQLEEIVQQTPDNDIKDFEDLQTAFSFLIETGALLHFPDTSHGLR
NLYFLDPVWLSECLARIINVKASRVLAKNGIIQVTELRTLLVGTGFTEQTEEQYLQFLAK
FEIALPITNNSYLLPHLLPSKPGFEFSNLRSKSTNTIQRLFKMNFVPVGFWQRFITRILI
SLAEMDAQLFENEKNPRRGRANRASVYSFTRSQRRNRCSTFRVRRNQTIYWQEGLQVNYD
GGFLSVESSEVNWKRKKSAGIKIYCQSETRDFSAVAFITDHVNSLIDQWFPALTATDADG
TPLVEQYVPCPHCTPTVTGQAEIHIQVHGQHYFSMEDCLLTAIKHTHIECPNHPTDPVSL
EELVPELFMTDFPARLFLEMNCLEQSETTDNILGQGGSGTTVYKATYNAIPIAVKKFHFK
KCGLQSDGINEDSMFRHLEAMEALRNFSEFRQEASMLHSMQHPCIVSLVGISIHPLCFAL
ELAPLGSLNTVLTDYAKGASFIPLGHMLTHRIAYQIAVGLAYLHRKNIIFCDLKSDNVLV
WTLDLTETVNVKLSDYGISRQSFHEGALGVEGTPGYQAPEVMPGIVYDEKVDMFSYGMVL
YELLSGRRPVLGQHQLQIAKKLSKGVRPSLGALEQVQFHRMHNLMVECWDTKPEKRPGAG
TALRLMQDPSFPAFMYMLRCGEQSSFCPSQELERTVIFWDEEGNDRNYSVVNIDKGLIEV
DHISCPGIRLSCQLKLQSALWTATVDQKIQVYSLKGMCPLNVPLRVLDVPAVVTCFVPVS
RGNQKSPVMLAGMADGMVAVYSLANEIPEGWCSYLCSRSANKFQFKISDNDLRQNAYPVT
DMIAVNNGSEVWYSNGPGILIIDTLATEITRRLEPYQAPSQVISMTCNMGCNGEEAIWCL
DDKTSTLIMYRSYQVCAHYTCSDCNPLRDMFPIQQPASFATTTAITPTDTTDSNSMDVSI
IFNDEVGTQVIRHSDSMTDYCSLSSESHSCTNRNTRTSFSALSSPASPTSIPHSTDCESS
LSHDRHGSISPSVHDIEQLQAVKILTVKDTLWIPRRGGDIIVIELENQSICQQGRVMAVL
KPESAPEDRKLVDAAVVAKDTVVCCFQNDTRDWNLHVWRAWGSREFKLFYQSYEELARME
VSMRRRK
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgtactgggatgtgggtcatgaggacaatccagaagacaacatggcaccaggaacagac
acagttcctgagattatgggaagcaaacaatctgggttgggtggcttacccatcgaacag
tgtccaaccctcaaaaacattcaggcagcgtacagtgcaggggaggtggaaagagctcaa
cagcttgccagactgcatttggaggcaaactaccaagtggagaagttgttaggtgtcata
gctgcacacggagacacagagatgctgcagtatctgctccaggagaccggaatggaactg
tcaaaggaactgaatgatggaaaccctgctattattgctgcacatcaaggtcatgaagag
gtgatcaaagtattgctgaattctacttcagatttgtatgttgacaaggatctgctgaac
tggatgcttgctgtagcctgtgaaaaaggacatctggatgtagtgaggcttttggtactt
gtgtacaaggcagagaccgacagttgtggagtgaagacacaggatcatccgatcatcaca
ggtcagccgttgtatgcagcaatgaaggcaggcaatgaggagattgcggggtttcttctg
gataatggagcctgtttctcatcctatgttttactggatcacccagaactcagcaaccgg
ctgctgagaaaacagtttacagaaccaagtagccagtatgaagtttcggacagacaaaca
ggcctgtcactgaagtggtcgtgcctgaagctgccctggttagagttggactggttcatt
gatgtttccaatcgaataacagagcttgatttgtgtaggaacagtctcactttccttcct
tcagttattccttggggattagtgcatctgaaaaaactcaacttgtccgcaaatcagctg
aaggacctgcccaatgtgacctcttcagaagaaatactttgcttaggtattctggaaatt
gatgtgtcaaggaaccaactgagctgcctgcccactggcttcttacatctaccaaagctt
gagaaactcacagcttacgccaatttgctggaaatgttatttgatgaggaaaaagcaaca
aattggattggattgagaaaactccaggagattgatgtttctgacaataaacttcagctt
ttaccctctacgttcctgcactgctgcaagtccctcagtaggttgaaagcatctcaaaat
acactcaaggattttcctgaaccttgggcctgtcctttgaaattttgtaacgtttctgga
aatttcttgaaatcccttccaaacactctgagtatcttctggaagaattatcttaaagaa
gcaaatttttctgacaatttgttgaaggacgtgccagcaaacatctttgaacttaagaac
ctgagctctctgaaattatctggaaatcagatacagtctcttcctccagtggataaatgg
cagtgctctaacctgaaatcacttgatctctctcgaaatcatcttggaaagagtgaagaa
ggagtcagaactagaaaagctttttttacaacatggttaaagaaaacttcggacacagtt
tcaccagttgaattcccacagttccttggtgagtgcttagaggttctgcacctggacaac
aactttcttgattcagtccctcagtcagtgtgctggctgcgatcgctctctgagctgtac
ctttcaaacaaccctggaattcgggagctccctgctgagctaggccagttggctaatctg
tggcagctggatatcgatcaattaaatatctctaatgtgcccacagagatcagaaatgaa
ggccccagttcaatactgacctatctgagagcacagctgcggaaagctgagccctgcaaa
ctaatgaagatgatcattgttggacctccccgtcaaggaaaatccacgctgttggagacc
ctgcagtctggaaagcccactcaaagcatgtccaaagaaagtagcatccaaactacgaac
tgggaacttctacgacctgccaatgtcaagacaaaggtggattcagtggtgtttaatgtg
tgggatgttggaggtactgccataatgtcaacagtcaatcagtgcttcttcactgataaa
gccctctatgtggtggtgtggaatctggctcttggagaggaggcagtggcaaacctgcag
tcgtggctactgaacattgaggcaaaagctcccaatgctactgtgattgtagtaggaaca
catttggatttgattgacacaaaattccgatcagagagaattgctacacttcgggcttat
gtcctagctctgtgtcgctctccatctgggcctcgagcaactgggtatcctgacatcagc
tgccgaaatttacatgagatatcctgcaaaacacttgatggactggaagggcttcgcaaa
ttgatctttcaagttgcttgtagcatgaagaacacagggaatctaactgcatcacagagg
ttggttgggagattgataccaaagagttactttaatctgttgaatgctgtcctaaaagaa
caacaaagaagaagcagtagtaacgaggtccaatacttaactgaccagcaactggaggag
attgtgcagcagactcctgacaatgacatcaaggactttgaagatttgcagaccgctttc
tccttccttattgagacaggagcattgctgcattttccagacaccagccatggtctacga
aacctctacttcctagatccagtgtggttatctgaatgcttggcaagaattatcaatgtc
aaagcttcacgtgtgcttgccaaaaatggaataatacaagttacggagctgagaacattg
ttggttggaactggcttcacagaacagactgaggagcaatacttacaatttcttgccaag
tttgagattgctcttccaattaccaacaacagttatctgcttccgcatctgttgccatca
aagccaggattcgaattcagtaatttgcggagcaagagcaccaacaccatccagagactt
ttcaaaatgaactttgtgcccgttggcttttggcaacgatttattacccgcatcttgatt
agcttggccgagatggatgcccagctctttgagaatgaaaagaatccaagacgaggcaga
gcaaatcgggcatcagtttacagcttcacaaggtcacagcgtcgcaatcgttgtagtact
ttccgagtaagaagaaaccaaactatttattggcaagaaggtttacaggtgaactacgac
ggtgggtttctgagtgtggaatcctctgaggtgaactggaagaggaaaaagagtgcggga
ataaaaatctattgccaatctgaaacacgagatttctcagcagtcgcattcatcactgat
catgtcaattccctgattgatcagtggtttccagctcttacagccacagatgcggatgga
actcccttggtcgagcaatatgttccatgtcctcactgcacccccacagtaacggggcaa
gctgaaatccacatccaggttcatggccagcattacttcagtatggaggactgcttgctc
actgccatcaaacacacacacatcgagtgcccaaaccacccaacggaccctgtctcactg
gaggagctagttccagagctttttatgactgatttcccagcccggttatttctagaaatg
aattgtctagaacagagtgaaacaacagacaacatcctcggacaaggaggaagtgggaca
acagtgtacaaagcaacatataacgccatacccatagcagtcaagaaattccacttcaaa
aaatgtggactgcaatctgatggcatcaatgaggattcaatgttcagacatctggaagcc
atggaagcattacggaatttctctgaattccgtcaggaggccagcatgctgcactccatg
caacacccatgcattgtgtcactagttggcattagtattcacccactttgtttcgccttg
gaactggctccgttgggcagtctgaatacagttctgactgattatgccaaaggcgcttcg
tttattcccctgggacatatgttaactcacagaatagcctatcaaattgcagtcggcttg
gcatatctgcacagaaaaaacatcatcttctgtgacctgaagtccgataatgttttagtt
tggactctggatctgacagaaacagtaaatgtgaagctatctgattatggaatatctcgt
cagtcattccatgaaggagcccttggtgttgaaggtactcctggatatcaggcaccagaa
gtcatgcctggaattgtttatgatgaaaaggttgacatgttttcatacggaatggttttg
tacgaattgctgtctgggcgacgaccagtccttggacaacaccagctgcagattgctaaa
aaactgtcaaaaggagttcggccttccctgggagctctggaacaagtgcagttccataga
atgcacaatctgatggttgagtgctgggatacaaagcctgaaaagagaccaggagcaggc
actgccctcagactgatgcaggatcccagttttccagccttcatgtacatgctgcggtgt
ggtgagcaaagctcattctgtccttctcaagaactcgagcgaactgtcattttctgggat
gaagaaggaaatgacaggaattacagtgtggtaaatatagacaaaggactgattgaagtg
gatcacatcagctgccctggaattcggctgagctgtcagctaaagctacagagtgcatta
tggacagcaaccgtggatcagaaaattcaggtttacagccttaaaggaatgtgtccctta
aatgtgcctctccgagtactggatgttcctgccgttgtgacatgtttcgtaccagtatca
cgtggaaaccagaaatctccggtaatgcttgcaggcatggctgatggaatggtcgcagtt
tactctctggccaatgaaattcctgagggttggtgttcctatctgtgctcacgctcagca
aataagtttcagtttaaaatctccgacaacgaccttcgacagaatgcgtatccagttact
gatatgatagcagtgaacaatggatcagaagtgtggtacagcaacggtcctgggatcctg
atcatagacacacttgctacagaaataactcggagattagaaccttatcaagctccctca
caagtcatatcaatgacttgcaatatgggatgtaatggggaagaggccatttggtgtctg
gatgataagacaagtactttaattatgtaccgttcatatcaggtctgtgcccattatacg
tgcagtgactgtaatccactgagagacatgttccccatccagcagcctgctagttttgca
acaaccacagccattacacccacagatacgactgattccaactccatggacgtcagcatc
attttcaatgatgaggttggaacccaagttataagacattctgactccatgactgattac
tgttctctgtcatccgaatctcactcctgtaccaacaggaacaccaggacatcattcagt
gccctgagttccccagccagtcccacaagtattcctcattctactgactgtgagtcaagt
ttatcacatgacaggcatggaagcatctccccatcagtgcatgatattgaacagctacaa
gctgtaaaaatcctaaccgttaaggacaccctgtggataccaagacgaggtggtgatatc
attgttattgagctggaaaaccagtccatctgccagcaaggcagggtcatggcagtacta
aagccagaatctgcacctgaagacagaaaactcgtggacgctgctgttgtggcgaaggac
acagtggtctgctgctttcagaatgacaccagagattggaacctgcatgtgtggagagcc
tggggatccagagaattcaagctattctatcagtcatacgaagagttggcaagaatggaa
gtcagcatgcgcagacggaagtag
DBGET
integrated database retrieval system
