Rhincodon typus (whale shark): 109917474
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Entry
109917474 CDS
T06055
Name
(RefSeq) gastrula zinc finger protein XlCGF26.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109917474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109917474
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109917474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
Zn-ribbon_8
zf-Di19
zf-C2H2_3rep
BolA
C1_4
LIM
zf-C2H2_11
XPA_N
Motif
Other DBs
NCBI-GeneID:
109917474
NCBI-ProteinID:
XP_048475008
LinkDB
All DBs
Position
42:complement(5363691..5376756)
Genome browser
AA seq
538 aa
AA seq
DB search
MNKPWKCEDCGKAFCSPSALETHRRIHTGERPFTCCMCGKGFTQLCSLQTHQRVHTGERP
FNCTLCGKGFTHQSAVMRHRQVHARDRLFICSGCGKAFTQLCSLQAHQRVHTGERPFSCP
VCGKGFTRSSAALQHQQAHAGERPYTCSECGKGFTQSSHLLTHQRVHTGERPFACLECGK
EFGDSSNLLTHQRVHTGERPFACSECGRGFTQLSHLLRHRRFHTGERPFTCPVCGKGFAQ
SSAVSQHRRVHSGERPFTCSVCGKGFAQSSNLLTHQRVHTGERPYTCSECGKGFTRSAHL
LRHQRLEAHRRVHTGERPFTCSVCGKGFTRLASLQTHQRVHSGDRPFCCSECGMGFSASS
HLLRHQRVHSGERPFPCSQCGKAFRFSSNLWKHQRVHSGARPFTCTACGKAFGTSSSLLN
HRATHASERPFKCSDCGAGFKNSGDLMVHQRTHTEERPFSCAHCAKRFRVSADLRRHQRV
HTGERPFACTVCQKRFARLASLQSHRRVHTGERPFPCSECEMRFSASSHLRRHQRVHE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccatggaaatgtgaggactgtggaaaggctttctgttctccgtctgcactc
gaaacccatcggcggattcacacgggagagaggccgttcacctgctgcatgtgcggaaag
ggcttcactcagttgtgcagcctgcagacgcaccagcgagttcacacgggcgagaggcca
ttcaactgtactctgtgtgggaagggcttcactcatcagtcggccgtgatgcggcaccgg
caggttcacgccagggacaggctgttcatctgctccggttgcgggaaggcgttcactcag
ctgtgcagcctgcaggcccaccagcgggtccacaccggggagaggccgttctcctgcccc
gtgtgcgggaagggcttcacccggtcgtccgcagcgctgcaacaccagcaagcccatgcg
ggggagagaccgtacacctgctccgagtgcgggaaggggttcactcagtcgtcccacttg
ctgacgcaccagcgggttcataccggagagaggccgttcgcctgcttggagtgcgggaag
gaatttggagattcgtccaacttactgactcaccagcgggttcacaccggggagaggccg
ttcgcctgctccgagtgcgggaggggattcactcagttgtctcacctgctgagacaccgg
cgcttccacaccggggagaggcccttcacttgccccgtgtgcgggaagggattcgctcag
tcgtctgccgtgtcgcagcaccggcgcgtccactccggggagaggcctttcacctgctcg
gtgtgcgggaaggggttcgctcagtcgtccaacctgctgacccaccagcgggtccacacc
ggggagaggccgtacacttgctccgagtgcgggaagggcttcactcggtcagcccacctg
ctgaggcaccagcgactggaagcccatcgccgggttcacaccggggagaggccgttcacc
tgctcagtgtgcgggaaggggttcactcggttggccagcctgcagacgcaccagcgcgtc
cactccggagacaggccgttctgctgctccgagtgcgggatggggttcagcgcttcctcc
catctgctgaggcaccagcgggtccactcgggcgagaggccgttcccttgctcccagtgc
gggaaggcctttcggttttcgtccaatctctggaagcaccagcgggttcacagcggggcg
aggccgttcacttgcacggcctgcgggaaggcgttcggcacatcgtccagcctgctgaac
caccgcgccacgcacgccagcgagaggcctttcaagtgctctgactgcggggccggcttc
aaaaactccggcgacctgatggtccaccagcggactcacaccgaggagaggccgttcagc
tgcgctcactgcgccaagaggttcagagtttcggccgacctccggaggcaccagcgggtc
cacaccggcgagaggcctttcgcttgcaccgtgtgccagaagagattcgcccggctcgcc
agcctgcagagccaccggcgggtccacaccggcgagaggcctttcccgtgttcggagtgc
gagatgcgcttcagcgcttcctcccacctgcggagacaccagcgagttcatgagtga
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integrated database retrieval system
