Rhincodon typus (whale shark): 109923636
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Entry
109923636 CDS
T06055
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
109923636
NCBI-ProteinID:
XP_048469377
LinkDB
All DBs
Position
28:complement(40548540..40610247)
Genome browser
AA seq
2551 aa
AA seq
DB search
MLYSEEDGCKLQEDINRWSAGSADKLGVIHLRSVDKVTYYTVNGRTQESAEDMRELGANS
QIPEGSEQLPSLFLCRCSAGYVGDRCQFPDPCLSSPCQNHGSCSAVIRGQSVDYVCACQR
GYTGHQCLYRFNNACLSNPCRNGGSCQLVNNMREYKCRCPPGWAGKQCQQADPCASNPCA
NGGQCVAFEAHYICKCISGFHGPTCNQDVNECGVNPSPCRNGGTCFNHIGSYQCTCPPEY
TGHSCENLYVPCSPSPCQNGGTCRQLGDALYDCTCLPGFSGQDCEVNVDDCAEHHCQNEG
LCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACQNGGTCHNTNGGYNCVCVNGWTGD
DCSENIDDCAIAACYSGATCHDRVASFYCECPHGRTGLLCHLDDACISNPCHEEANCSTN
PVNGKAICTCPVGFSGASCKQDDDECSLGSNPCEHSGKCVNTLGSFKCLCQPGYHGPRCE
LDINECMSSPCHNDATCLDLIGKFQCICMSGYEGVFCEIDIDECASNPCLNKGNCVDKIN
KFECECPSGFNGNLCQMDVDECASTPCQNGARCVDGPNKYHCQCLEGFTGTLCETDIDEC
EQDPCHYGVCKDAIASFLCVCNQGYTGRVCDININECQSQPCQNGGSCQDKIDGYLCACL
KGTTGMNCETNLDDCASNPCEYGNCIDQINSYDCVCEIGYTGPMCNINIDECASNPCHNG
GTCKDGINSFTCVCPEGYHDLVCLSEVNECNSNPCIHGECRDHLNGYSCECSPGWTGTNC
DLNVNECESHPCVNGGTCRDMNNGYLCDCQPGFRGPNCQTNINECASNPCLNQGSCIDDV
AGYKCNCVLPYTGVNCEDVLAPCSSQPCQNGGVCHESEDYENFSCDCPEGWQGQTCQKDV
NECVKSPCLNGATCQNSMGGFQCVCRQGYTGTLCETDVDDCQPNPCHNGGSCSDGVSSFT
CDCLPGFRGPKCEEDINECASDPCRNSGNCTDCVNSYTCTCPLGFNGMHCENNTPDCTES
SCFNGGTCIDGINTFTCLCPTGFTGSYCQHNINECDSRPCLNAGTCHDSYGTYKCTCPQG
YSGLNCQNLVRWCDSSPCKNGGTCWQTGTTYRCECRSSWTGLYCDVPSVSCEVAAKQQGL
DVEQLCRNSGLCIDAGNTHHCRCQAGYTGSYCEEQVDECTPNPCQNGATCTDYLGGYSCK
CVAGYHGINCSEEINECLSQPCDNGGRCIDLINTYKCSCPRGTQGVHCEINLDDCNPQLD
SLPLDPRCFNEGRCVDRVGGYSCTCPPGFVGEHCEGDVNECLSNPCDPRGTQNCVQLINA
YHCECRPGYTGLRCDRIIDSCKDRPCRNGGTCSVAGNTAHGFICRCPSGYEGASCENQAS
VCGNLRCRNGGTCVMTPGGSPRCACPLGQGGVDCQLPTRNPCKSNPCYNGGTCESVPTEP
FYRCHCPRLFNGLQCFILDYEFEGGNGQNITFPPNIEQGCDKPECVQLAKNRVCEAHCNT
HACDWDGGDCSLNFNDPWKNCSHALQCWRYFGDGKCDKHCNNVGCLYDGFDCQSIESQCN
PLYDLYCKDHYDDGHCDQGCNNIECGWDGLDCANDKPQKLAEGTLLLIVLVPPEQLLNDS
VGFLRELSHILHTNVKFKRHPNGDMMVYPYYGNKEQLHRHHVKRSMADASGRVIDALSHV
KRSFYALMSPRSRRELDRREVKGSIVHLEIDNRQCYQAFSDCFASTTDVAAFLGAMASQG
SLQLPYNIETVESEGIVTIHDDNLYPMYVVVSVLIFLAFIGMGVLVSRKRHREHGQLWFP
EGFKVTESSKKKRREPVGEDSVGLKPLKNVSDGALMDDNQNEHWGDDRGAETKRFKFEEQ
VILVNREENTDHRQWTQQHLDAADLRLPTMAPTPPQGETESDCMDVNVRGPDGFTPLMIA
SCSGGGLETANSEEEVDDASGNLISDFIYQGAKLHNQTDRTGETALHLAARYARSDAAKR
LLESSADANIQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA
VEGMVEELVNCHADVNAVDDFGKSALHWAAAVNNVEATLVLLKNGANKDMQDNKEETPLF
LAAREGSYETGKLLLEHFANREITDHMDRLPRDIAQDRMHHDIVRLLDEYNLVRSPQVSM
GPNTTTLSPTICSPNGYVANLKSASHSKKTRKNSAKAGSGKDSKEAKAKRKKSQDGKGSL
LDNPAVLSPVDSLESSHTYLSDVASPPLLTSPFQQSPTIQLNHLQGLAGDGQLNLGHLGM
GNKQEMALSGTNRMVFESVAPRLTHMPSSNGQPLGNTSMGMNLGGAGTVSGQCDWLARMQ
AGMPQNLYSALRNPVQSQAGRLQQNQHGIMTSLHSGLPNTTLSPIVNYQGLTNTTRLSQP
HLIQQQSQAMQPLNTLPSGNAHPTSQNYCNGDSRQNDLSPMGANNLPMHMVSAQETQLVQ
TSMPTSMSQSMATTQFLTPPSQHGGYSSMDNTPNHPFPLADHPFLTPSPESPDQWSSSSP
HSNMSDWSEGISSPPTSMHSQMGHLSDQVFK
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atgttatacagtgaggaggatggctgtaagttgcaagaggatatcaatagatggtcagct
gggtcagcagacaaattaggggtaatacacttgaggagtgttgacaaggtgacgtattac
actgtgaatggtaggacccaggaaagtgctgaagatatgagggagcttggtgcaaattca
cagatccctgaaggcagtgagcagctcccctctctgttcctatgcagatgcagtgctggc
tatgttggagatcggtgccagtttccagacccttgcctaagctccccatgtcagaaccat
gggagctgcagtgctgtcatccggggccagtctgttgattatgtgtgtgcctgccagcgg
ggttatacagggcaccagtgcctctaccgcttcaacaatgcctgtctcagcaacccttgc
cgtaatggaggcagctgccaactggtcaacaacatgcgggagtacaagtgtcgctgtccg
cccggctgggcaggaaagcagtgccaacaggcagacccctgtgcatccaatccgtgtgcc
aatggaggtcagtgtgtggcgtttgaagctcattacatctgcaaatgcatttctggattc
catggccccacatgcaatcaggacgtgaacgaatgtggagtaaacccctcgccctgccgc
aacggcgggacctgcttcaaccacatcggctcctatcagtgtacctgcccacccgagtac
accggccacagctgtgagaatctctatgtgccatgctcaccgtcaccctgccagaatggg
ggcacctgtcggcagcttggggacgctctgtacgattgtacctgcctcccagggttttct
ggacaggactgtgaggtgaatgtggacgattgtgctgagcatcactgtcagaatgaaggc
ctgtgtgtggacggtgtgaacacgtacaactgccagtgtccgccagagtggacaggtcag
ttttgtacagaggatgtggacgagtgccagctccagcccaatgcctgtcagaatggaggc
acctgccataacacaaatgggggctacaactgtgtctgtgtcaacggctggacaggggat
gattgcagtgagaacatcgatgactgtgccattgctgcctgctacagtggggccacgtgc
catgatcgtgtcgcctccttctactgcgaatgtccccatggcaggaccgggttgctgtgt
caccttgatgacgcgtgcattagtaatccttgccatgaggaggcgaactgcagcacaaat
cctgtcaacggcaaagccatctgcacatgtccagttggattctcgggggcgtcctgcaag
caggatgatgatgaatgctctctggggtccaatccatgtgagcattcagggaagtgtgtg
aacaccctgggatccttcaagtgcctatgccagcctggttaccatgggcctcgctgtgag
ctggacattaacgagtgtatgtccagcccctgccacaatgatgccacctgccttgacctg
attggaaaattccagtgcatctgcatgtccggatatgagggagtcttctgtgaaattgat
attgacgaatgtgccagtaatccgtgcttaaacaagggcaactgtgtcgacaaaatcaat
aagtttgagtgcgaatgcccctcaggattcaatgggaatctgtgtcagatggatgtggac
gaatgtgcaagtactccctgtcagaatggagcccgctgtgtggatggacccaacaaatat
cactgtcaatgtttggaaggttttactggaacactgtgtgagacagacatcgatgagtgt
gagcaggacccctgtcactatggcgtttgtaaggatgcgattgcgagctttctctgtgtc
tgtaaccagggttacacaggccgagtgtgtgatatcaacattaacgagtgtcagagccag
ccatgtcagaacggaggaagctgccaggataagatcgatggttacctgtgtgcctgtctg
aaaggaaccacaggcatgaactgtgaaacaaacctggatgattgtgccagtaacccgtgt
gaatacggcaattgcatcgatcagattaacagttatgactgtgtctgtgagatcggatat
acaggtcctatgtgtaacattaatattgacgagtgtgcttcaaacccctgccacaatggg
gggacctgcaaagacggcatcaacagcttcacttgtgtctgtccagagggttatcacgac
ctggtttgtctgtcagaggtgaatgagtgtaacagcaatccctgtatccacggagaatgt
cgagaccatctcaatgggtacagctgtgagtgtagtccaggctggaccggaacaaactgt
gacctgaatgttaatgagtgcgagtctcacccctgtgtcaatgggggcacatgtcgagac
atgaacaacggctacctgtgtgactgtcagcctgggttccgaggacccaactgccagacg
aacatcaatgagtgtgcatcaaacccctgcttgaaccaggggagctgtattgatgatgtt
gctggatacaagtgtaactgtgttttaccatacacaggagtgaattgtgaggacgtcctt
gctccatgctccagtcagccatgtcagaatggtggtgtgtgtcacgagtctgaggattac
gagaatttctcctgtgactgtccagagggatggcaaggtcagacctgtcaaaaagatgtg
aacgaatgtgtgaaaagcccatgcctcaatggagccacttgccagaactcgatgggagga
ttccagtgtgtctgccgacagggttacaccggcaccctctgtgagactgatgtggacgat
tgtcagcccaatccatgccataatggaggctcgtgctccgatggtgtcagtagcttcacc
tgcgactgtctccctggattccgtggccccaaatgcgaggaggatattaacgagtgcgcc
agtgacccctgcaggaacagtggtaactgcacggactgtgtcaacagttacacatgtacc
tgccccctgggcttcaatggtatgcattgtgagaacaacactcctgactgcacagagagc
tcgtgttttaacggtgggacttgtattgatggaatcaataccttcacctgcctctgtccg
actggtttcacaggcagttactgccaacacaacatcaatgagtgtgactccagaccgtgt
ctcaatgctggcacttgtcacgacagttatggcacgtacaaatgcacttgtccccagggc
tactctggcctcaactgtcagaacctggtacgttggtgtgactcgtcaccctgtaagaat
ggaggaacctgttggcagactggcaccacttatcgatgtgaatgtaggagcagctggact
ggcctctactgtgatgtgcccagtgtgtcctgcgaggtggcagccaaacagcaagggctg
gatgtggagcagctgtgtcggaacagtggcctctgtatcgatgccgggaacacacaccat
tgtcggtgtcaggctggctacacagggagttactgtgaggagcaagtggatgagtgcacc
cccaacccctgtcagaacggagcgacttgcactgattatctgggtggctactcctgcaag
tgtgttgctggttatcatggaatcaactgctcagaggagattaacgagtgtctctcccaa
ccctgtgacaatgggggcaggtgcatcgacctcatcaacacctacaagtgttcttgtcct
cgggggactcagggcgtgcactgtgagataaacctggatgactgtaacccccaattggac
tctctacctctggaccctcgatgtttcaatgagggacgctgtgtggaccgtgtcggggga
tacagctgcacctgtccccctggatttgtgggtgaacattgtgaaggcgacgtcaatgag
tgtctgtcaaacccatgtgatcctcgagggacccagaactgtgtccaactcatcaatgcc
taccactgcgagtgccgacccggctatacagggctccgatgtgatcggattattgacagc
tgtaaggaccggccgtgtcgaaatggtgggacatgctctgtcgctgggaacacggctcac
ggcttcatctgtcgctgcccctcgggatatgagggagcatcctgtgagaaccaggccagt
gtctgtggtaatctgcggtgccgtaatggggggacgtgtgtcatgaccccaggaggttct
cctcgctgtgcatgccccctgggacaaggcggggtggactgccagctgcccaccaggaac
ccgtgcaagtccaacccatgttacaatgggggcacgtgtgagagtgtacccactgagccc
ttttaccgctgccattgtccccgcctcttcaatgggctgcagtgcttcatcctggattat
gagtttgaaggaggcaatggacagaacatcacattccccccgaacatcgagcagggctgt
gataaacctgagtgtgtgcagcttgccaaaaatcgtgtgtgtgaggctcactgtaacact
catgcctgcgactgggatggcggagattgctctctcaacttcaacgatccctggaagaat
tgctcgcacgctctgcaatgttggcgttactttggagatgggaaatgtgataaacactgc
aacaatgtgggctgcctatatgacgggttcgactgtcagagcatcgagtcccagtgcaat
cccctgtatgacctgtactgtaaagatcactatgatgatggccactgtgaccagggctgt
aataatatcgagtgtggatgggacggtctggattgtgccaacgacaaaccacagaagctg
gcagagggaacactgctcctcattgtcctggtgccccctgaacaactgctgaacgactca
gtggggttccttcgggagctcagccacatcctgcacaccaacgtcaagtttaagaggcac
cccaatggtgacatgatggtttacccttactacgggaacaaagagcagctgcatagacac
catgtgaagaggtcaatggcagatgccagtggtcgagtcattgacgcattgagtcacgtc
aagcgctcattctatgcactgatgtccccacggagtcgcagggagttggaccggcgggaa
gtcaaagggtcgattgttcacctggaaatagataatcgacagtgttaccaggctttctcc
gactgttttgccagcacaacagatgtggcagctttcctgggtgccatggcttcccaaggc
agcctccagctcccatacaacattgagactgtggagagtgaaggaattgtgaccattcat
gacgataacctgtaccccatgtatgtcgtggtgtctgtgctcatattcctggccttcatt
gggatgggggtgctagtgtctcggaaacgacatcgagagcatggacagctctggttccct
gaaggtttcaaggtgacggagagcagcaagaagaaacgccgggagccggtgggcgaggat
tcggtcgggttgaagcctttgaagaatgtttctgatggagcactcatggatgacaaccaa
aatgagcactggggcgatgacaggggggctgaaaccaagagattcaagtttgaagagcaa
gtgatcttggtgaaccgtgaggagaacactgaccacagacagtggacacagcaacacctg
gacgctgctgatctccgactgcccaccatggcccccacccctcctcagggggagactgag
tctgactgtatggacgtcaatgtcagaggcccagatgggttcacccccttgatgatcgcc
tcatgcagtggagggggtttggagacggcgaacagcgaggaggaagtggatgatgcctcc
gggaacctcatctctgatttcatctaccagggggccaagctccacaaccaaactgaccgg
acgggcgagactgctctgcatttggctgcacgctatgcccgttcagatgcagccaaacgc
ctcctagaatcaagtgcagatgccaatatccaggacaacatgggcaggacccctctgcat
gctgctgtggctgctgatgcccagggggttttccagatcctgatccggaaccgagccaca
gatttggatgcgcggatgcatgacggaaccacgccattaatcctggctgcacggttggct
gtggagggaatggtggaggagctggtgaactgccatgctgacgttaacgccgtagatgac
tttgggaaatctgctctgcactgggctgctgctgtcaataatgtggaggcaacactggtc
cttttgaaaaacggagccaataaggacatgcaggacaacaaggaagagaccccactgttc
ctggcagctcgggaagggagttacgagacaggcaagctcctgctcgagcactttgccaac
cgtgaaatcactgaccacatggatcgactgcctcgtgacattgctcaggaccgcatgcat
catgatattgtgaggttgctagatgaatataacttggtgaggagcccccaggtgtcaatg
ggccccaacaccaccaccctctccccgacaatctgctcgcccaatggctatgtggccaac
cttaagtcagccagtcacagcaagaagacccggaagaacagtgccaaggctgggagtggc
aaggactccaaagaggccaaggcaaagaggaagaaatcccaggatgggaagggaagccta
ctggacaatccagctgtcctgtcccccgtcgattccctggaatcctcccacacctacctt
tcggatgtggcctctcctcctctcttgacatccccattccagcagtcacccactatccag
ctaaaccatttgcaaggactagctggggatgggcaactgaacctgggccacttgggcatg
ggcaacaagcaggagatggctctgagtgggactaacaggatggtcttcgaatcagtggct
cctcgcctcacgcatatgcccagctccaatgggcagcctctgggcaacacttcaatgggc
atgaacctgggaggggctgggaccgtgagcggtcagtgtgactggctggctaggatgcag
gccggaatgccacaaaacctttacagtgccttgaggaacccagtccagtcccaagccggc
agactccagcagaaccagcacggaataatgacctccttacatagcggactccctaacacc
actttgtctccgatcgtcaactaccagggtctgaccaacaccacgaggctgtcccaaccc
catctgatacagcagcaatcacaggccatgcagcccctcaatacattgcccagtggaaat
gctcaccccacgagtcaaaactactgcaatggtgattcaaggcagaatgatctgtcccca
atgggggcaaacaacctccccatgcacatggtttcagctcaggagacacagctggtccag
acgtcaatgccaacctccatgagtcagtcaatggccaccacacagttcctgactcctccc
tctcagcacgggggctactcctccatggacaacacgccaaaccaccctttcccattggct
gaccaccctttcctcaccccctccccggagtcccctgatcaatggtccagctcctcgccg
cattccaacatgtcagattggtcagaaggtatctccagtcctccaaccagcatgcactcc
caaatgggacatctctctgaccaggtcttcaagtga
DBGET
integrated database retrieval system
