Rhincodon typus (whale shark): 109924117
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Entry
109924117 CDS
T06055
Symbol
celsr1a
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1 isoform X1
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
7tm_2
GAIN
Laminin_G_2
Laminin_G_1
EGF
GPS
Cadherin_3
Cadherin_2
Laminin_EGF
Cadherin_4
Cadherin_pro
Dicty_CAR
hEGF
Motif
Other DBs
NCBI-GeneID:
109924117
NCBI-ProteinID:
XP_048466125
LinkDB
All DBs
Position
22:complement(19013619..19320357)
Genome browser
AA seq
3042 aa
AA seq
DB search
MKGSSMSARCPLLFTLLLHIPMMSCLSLHLSQGEDAGPEGEQQPPSPLANLSLGQAAWLY
RLDRTLTPGPLSRCLELGSQSGELRQTEPLDCSLLPANPLPLYLRYQAAAPTGLLTVRAR
LAVYVHGEDCYIKYRRKRPGTELSILVLLGPGAGRGPCLAAGQLLLNVWDVVPASLRPVS
PHCTSLNSSRLLLIPPLRSGHLLASGDYCLGTGATAELLCSRSPASDPQPEPLLIRVRVA
ALRYGHTTRALRRKRSTNRSPQFQLPSYQVSVPENEPAGTRVIVLSAHDLDEGESGRLEY
TMESLFDSRSSDYFQIDPDTGAVTTSQQLDRETKDTHVFKITAYDHGTPRRMAAATLTVT
VSDTNDHAPLFELSEYREVIRENVEVGYEVLTIRATDSDAPSNANMLYRIVNNKGNNSVF
EIDSKSGIVRTRGVIDREVLSEYHLIVEANDQGKDPGPLSATATVYITVEDENDNFPQFS
EKRYVVQVPEDVSVNTKILQVKATDRDKGNNAVIHYSIVSGNIKGQFYIDSVNGNIDIIN
PLDYETTREYTLRIKAQDGGRPPLINGTGLVMIQVIDVNDNAPIFVSTPFQATVLENVAI
GYSVIHIQAIDADSGNNARLEYRLVDTPPDFPLVIGNNTGWITVAMELDREMTEFYTFAV
EARDNGIPSMTSSAGISITVLDVNDNNPTFTERVYYLRLNEDAPVGSSVLTVTAIDRDVN
SVVTYQISSGNTRNRFSITSQSGGGLITLALPLDYKQERQYVLTVTASDGTRLDTVQVYI
NVTDANTHRPVFQSSHYTLSINEDKPVGTTVVIISASDEDTGENARITYIMEDNFPQFKI
NPDTGTITTQMELDYEDQASYTLAITARDNGIPQKSDTTYVEILVNDANDNNPQFVRDLY
QGTVYEDVPLSTSVLQISATDRDSGLNGRVFYTFHGGDDGDGDFYIEPSSGIIRTGRKLD
RENVPVYTLRAFAVDKGNPPLKASVNVHITVLDVNDNAPAFEKDEFDIYIEENSPVGSSV
ARITATDPDEGTNAQIMYQIVEGNIPEVFQLDMFTGDLIALTDLDYETKTEYVIVVQATS
APLVNRATIHIRLVDKNDNAPVLRNFEIIFNNYVTNKSNSFPSGVIGKIPAYDPDVSDRL
FYTFIEGNELNLLILDQNTGQLKLSQDLDNNRPLEANLKISVTDGIHIITALCTLRVTII
TEDMLTNSITVRLENMSQDKFLSPLLSLFVEGVAAVLSTTKDDIFIFNIQNDTDVSANIL
NVSFSALLPGGVRNQYFPSEDLQEQIYLNRTLLTTISTQRVLPFDDNICLREPCENYMKC
VSVLKFDSSAPFISSDTVLFRPIHPINGLRCRCPPGFTGDYCETEIDLCYSNPCGSHGLC
RSREGGYNCECREDYTGEHCEVSSRSGRCAPGVCKNGGTCINLLVGGFRCECPSGEYERP
YCEMTTRSFPPQSFVTFKGLRQRFHFTVSLMFATKERNALLLYNGRFNEKHDFIALEIIE
EQIQLTFSAGESTTTVAPFIPGGVSDGEWHSVQVQYYNKPNIGRLGIPHGPSGEKVAVVT
VDDCDTAISVRFGNRIGNYSCAAQGTQTGSKKSLDLTGPLLLGGVPNLPEDFPVRNREFV
GCMRNLTIDSKQLDMASFIANNGTLAGCAAKKNFCDVNVCQNGGHCVNKWNTYSCECPMR
FGGKNCEQVMPNSQRFKGTSQISWDDLDITISVPWYIGLMFRTRKANGFLVQANAGTSSK
INIQIIDSNLEFEVHNKHGLKAKLRLTRTRVSNGDWHHLLVEIKSMKDGKDIKYLAVLSL
DYGMYQDSVEIGNELPGLKLRSIYVGHLPEDDFPRQQGFYGCLQGLRMGDTSTNIATLNM
DRAEKLQVESGCDVPDPCDSTPCPMHSYCRDEWDSYSCICEPGFFGKNCMDVCRLNPCEH
VSSCVHNPSSSHGYTCNCGENYYGQYCENKIDLPCPRGRWGNPTCGPCNCDTTKGFDPDC
NKTTGECRCKDNHYQPQGSDTCYPCDCFPMGSQTRTCDVETGQCSCKSGVIGQHCNRCDN
PFAEITSDGCEVKYNVCPKAFEAGIWWPRTKYGRPAAMPCPKGSIGTAIRHCNEEKGWLP
PDLFNCTTLTFIQLKSIMEKLHRNETKMDTRNSKKIANMLQNATKHTPTYYGNDVKIAYE
LIKKILQYEGNQQDFELAATQDVEFNENIIKAASAILDPQNKEHWEQIQRTEGGTAHLMK
HYEEYAHTIARNLRKTYLRPFTIVTPNMIIAVELFEMTKFPGASMPQFEKIREKIPKDLE
SSVFFPDALLKIEGDEGQSNHPEHNVNGNLGDTFSKRKKRNAGGSHPYAVAVVIIYRSLG
LLLPERYDPDRRSMRVPNRPVINTPIVSATVYTNDQPLPQQLESPVTLKYRLFVTEERTK
PVCVFWNHTLAIGGTGGWSSKGCELVLRNESHINCQCNHMTSFAVLMDISKREHGEVLPL
KIVTYTTVSVSLFALFVTFLFLMLVRTLRSNLHNIHKNLVAALFFSELVFLIGINQTDNP
FVCSVIALLLHYFYLCTFAWTFVEGLHIYRMLTDLRNVNHGQMRFYYTIGWGIPAIITGL
AMGLDPQGYGNPDFCWLSVHDTLIWSFAGPICVVVIINIVIFVLAAKASCGPRHRSFEKT
GIISGLRTAFLMLLLISATWLLGLMAVNNDTMTFHYLFAIFSCFQGLFIFFCHCIFNEEV
RKGLKNIFTGKKQHADDTVLTRTTVLSRSLNCNNTYVDEGRMYRTAIGESTASMDSTVRS
AKSHNSCIASKRREEAQRVSLLSSQAEGGQTEPDSSIFHKKIKKPDEPDSDSDSELSLED
DHSSSYASSHSSDSEEEEFQRDPKWKQGAPKNNENNPIHSTPKGEAMPNHVKRYWPAECT
TASDSEDHGTLEKLKVETKVNVELHGENKSNHCSDIPRGGEDEEKESISIPHPSSNPQPE
QRKGILKNKVTYPPPLKEKNRINQIHNELSNCKATAISSRTSSVGSSDGTRTGVSVLIKQ
PSRPQSRDQLNGMTPIPMNIRTGTSTVHGDTSDSEGSNETSI
NT seq
9129 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcagcagcatgtctgcccgctgtccgctcctgttcactctcttgctgcacatc
cccatgatgagctgcctgagcctacacctttcccagggagaggacgcgggccccgaggga
gagcagcagccgccgtcgccgctggccaacctctccctgggtcaggccgcctggctgtac
cggctggaccgtacactgacccccgggccgctcagcaggtgcctggaactgggcagccag
agcggggagctgaggcagacagagccgctggactgctcgctgctgccagcgaacccgctc
cctctgtatctccggtaccaggcggcagcgccaacggggctactgaccgtcagggcccgc
ctcgccgtctatgtacatggggaggactgttacatcaagtacaggcggaaaaggccaggc
accgagctctcgatcttggtgttattggggccgggagccggccgaggcccgtgcctagct
gcagggcagctgctgctcaatgtgtgggatgtagtgcccgcttcgctccggcccgtctcc
ccccactgcaccagcctcaactccagccgcctgttgctgattccgccgctccgctccggc
cacctcctggcctccggggattactgcctgggcaccggagctaccgccgagctgctgtgc
tctcggagcccggcttcagacccgcagcccgagcccctcctgatccgggtccgggtggct
gctctccggtacggtcacacgacacgggctctccgccgcaagaggagcaccaaccgcagt
ccccagttccagctgcccagctaccaggtctcggtgcccgagaatgagccggcaggcacc
cgggtcattgtcctgagcgcccacgatctcgatgaaggggagtccgggcgcctggagtac
accatggagtcgctgtttgatagcaggtccagtgactacttccaaattgatcctgacact
ggagcggttaccacttcacagcaactcgaccgggagaccaaggacacccacgtgtttaaa
attactgcatatgatcatggaacaccacgtcgaatggctgctgccacccttactgtgact
gtcagtgacaccaatgaccatgcaccgctctttgaactatctgagtacagggaagtaatt
cgggagaatgtggaggtgggttacgaggtgctgaccattcgagcaacagatagtgatgca
ccttccaatgccaacatgctgtaccgtattgtcaacaataaaggaaataactctgtcttt
gagattgacagcaaatctgggattgtaaggaccagaggagtcatagaccgggaagtttta
tctgaataccacttaatagtggaggcaaacgatcaaggaaaagaccctggtcctctgagc
gccacagcaactgtttatataactgtggaggatgagaatgacaatttccctcaattcagt
gaaaagcggtatgttgtccaagtgcctgaagatgtttctgtaaacactaaaatcctgcag
gtcaaagctactgatcgagataaagggaacaatgctgtaattcactacagcatagtgagt
ggaaatataaaaggtcagttctacattgattctgtaaatggcaacattgatatcatcaac
ccattggattatgagacaaccagagaatacacccttcgcattaaagcccaagatggtgga
aggccacccttaattaatggtactggcttggtcatgatacaagtgattgatgtgaatgac
aatgctccaatatttgtaagcacaccttttcaggccacagtgttggagaatgtggctatc
ggatattctgtcattcacatccaggctattgatgctgactctggcaacaatgctcgtttg
gagtatagactggtagatactcctccagatttcccacttgttataggtaacaatacagga
tggataacagttgctatggaattggatagagagatgactgaattttacacttttgctgta
gaagctagagataatggaattccatccatgacctcctcggctggtatcagcattactgtg
ttggatgtaaatgataacaatcctacctttactgagagggtttattatctaagattgaat
gaagatgcacctgtggggagcagtgtgttgactgttacagcgattgatagggatgttaac
agtgtggttacgtatcagatatcaagtggcaacacaagaaatcgattttcaataaccagc
caaagtggtggtggactaatcactttagctttgcccctagattacaagcaggaaaggcag
tatgttcttacagttacagcatctgatggaactcggttggacacagtccaggtctatatc
aatgtcactgatgctaacacgcacagaccagtattccagagctcacattatacactcagc
atcaatgaggacaaacctgttggaacaacagtggtgattatcagtgcgtctgatgaagat
acaggggagaatgccaggataacttatatcatggaagacaactttccacagtttaaaatt
aaccctgacactggaaccataaccacacaaatggagctggactatgaagaccaggcatca
tacacattggcaataacagcaagagacaatggcattccacagaaatctgatactacgtat
gttgaaatcctggttaatgatgctaatgataacaaccctcaatttgtgcgagatttgtac
caaggcacagtatatgaggatgtccctttgtctactagtgtcctacagatttcagccaca
gatcgggattctggacttaatggaagagtgttttatacattccatggtggtgatgatgga
gatggggatttctacatagagccctcatcgggaattattcgaactggtagaaagttagat
agagaaaacgtgccagtctataccttgagagcctttgctgtagataaaggtaacccacca
cttaaggcatctgtgaatgtccatatcactgtgcttgatgtaaatgacaatgctcctgct
tttgagaaggatgaatttgatatttacattgaagaaaacagtcctgtcggctcatcagtg
gccaggatcacagcaacagatcctgatgagggaacaaatgcacaaatcatgtatcagatt
gtggaaggaaacattcctgaggtgttccaattggatatgtttactggggatctcattgcc
cttacagacttggattatgaaaccaaaactgaatatgtaattgtggtccaggccacttca
gcacctctggtcaatcgagccacaatacatatccgactcgttgataaaaatgacaatgct
ccagtgcttaggaattttgagatcatttttaacaactatgtgaccaacaaatcaaatagc
tttccttctggcgtgatagggaagattccagcatatgatccagatgtatcagatcgcctt
ttttacacctttatagagggcaatgagcttaatcttttgattttggatcaaaacactggc
cagcttaaattaagccaagacctagacaataacaggcctttggaagcaaatttgaagatc
tctgtcacagatggtattcacatcattaccgcactgtgtacattgagagtgaccatcatc
actgaagacatgctgacgaacagcatcaccgtacgtttggagaacatgtcccaggacaag
tttctgtctccactgctgtcgctgtttgtggaaggagttgctgctgtgttgtccacaacc
aaagatgacatttttatttttaatattcaaaatgacacagatgttagcgcaaacattctg
aatgtaagtttctctgcattgctgccaggtggagtaagaaaccaatatttcccttcagag
gatctgcaggaacaaatttacctcaacaggacgttgttgaccaccatctccactcagaga
gtcctcccgtttgatgacaatatctgcctgagggagccctgtgaaaactacatgaaatgt
gtctcagtgctgaagtttgacagttcagctccttttatttcatctgacactgtcttattc
cgacccattcatcccatcaatggactgcgttgcaggtgtcctcctgggtttactggagat
tattgtgaaacggagattgacctttgttattctaacccatgtggtagtcatggtctctgc
cgaagcagggagggaggatataactgtgaatgtcgtgaagactatacaggtgaacattgt
gaagtgagcagtaggtcaggccgctgtgcacctggagtctgcaagaatggaggaacctgc
attaatctacttgttggtggcttcagatgtgaatgcccatctggcgagtatgagaggccg
tactgtgaaatgacgacacgtagctttcctccacaatcctttgtgactttcaagggtcta
cggcagcgtttccattttactgtctccctcatgtttgcaacaaaagagagaaatgcctta
cttctttataatggccgttttaatgaaaagcatgatttcattgcactggagatcattgaa
gaacaaatccaactgacgttctcagcaggagagtctactacgacagtggcacccttcatc
ccagggggagtgagtgatggagaatggcactccgttcaagtgcagtactataataagcca
aatattggcagattaggtattcctcatgggccatcaggagagaaggttgcagtagttact
gttgatgattgtgatactgcaatatcggtgcgatttggaaatcgtattggaaactattca
tgtgctgctcagggaacacagactggatcaaagaagtctttggatttgacaggcccttta
ctacttggtggtgtccccaacctgcctgaagatttccccgtgcgtaatcgggaatttgtg
ggatgtatgagaaatttgaccattgacagcaagcaacttgacatggctagttttatagcc
aataatggtacacttgcaggatgtgctgctaaaaagaacttctgtgatgtaaatgtatgt
caaaatggtggacattgtgtgaacaaatggaatacatacagctgtgaatgtcccatgcga
tttggtggcaagaactgtgagcaggtcatgcccaattcccagcgttttaagggtaccagt
caaatcagttgggatgacctagatatcactatctctgtgccatggtatattggtctaatg
ttccgcacaagaaaagcaaatggattccttgtgcaggcaaatgctgggacttcctccaaa
attaacattcagataattgatagtaacttagaatttgaagtgcacaacaaacatggatta
aaagccaaactgcgactgactcggacacgggtcagtaatggagactggcaccatttactg
gttgagataaaaagtatgaaagatggcaaagacatcaagtacctggctgtcctatctttg
gattatggaatgtaccaggacagtgtagaaattggcaatgaattaccaggattgaaattg
agaagcatctatgttggacacctccctgaagatgacttcccaagacagcaaggattctat
ggctgcttgcagggcctgcgaatgggtgacacttcaacaaatatagccaccctgaacatg
gatcgggctgaaaagcttcaagtagagagcggttgtgatgttccagatccatgtgattct
actccgtgccccatgcatagctactgtcgtgatgagtgggacagctactcctgcatctgc
gaaccagggttctttgggaagaattgtatggacgtctgcagattgaatccatgtgaacac
gtctctagctgtgtccacaatccaagctcctcacatggctacacttgcaactgtggagaa
aactactatggccaatactgtgaaaacaaaattgacctgccatgtccaaggggaaggtgg
ggaaatcctacctgtggtccttgtaactgtgataccaccaaaggcttcgaccctgactgt
aacaaaaccacaggtgaatgccgatgcaaggacaaccattaccagcctcaaggtagtgac
acatgctacccatgtgactgctttccaatgggttcccaaacccgtacttgtgatgtggaa
acaggtcaatgttcctgtaagtctggtgtgattggacagcactgtaatcgctgtgataac
ccatttgctgaaatcaccagtgatggctgtgaagtgaaatataatgtatgtccaaaagcc
tttgaagctgggatttggtggccaaggacaaaatatggacgaccagcagccatgccatgc
cccaaaggatcaatcggaactgcaattcgtcactgcaatgaagaaaaaggctggctccct
ccagatcttttcaactgtaccacactcaccttcattcagctcaagtctattatggaaaaa
cttcatcgcaatgaaaccaagatggatacgcgcaattcgaagaaaattgccaacatgttg
cagaatgccacaaagcacacaccaacatattatgggaatgatgttaagattgcttatgag
ttgataaagaagattcttcaatatgaaggaaaccagcaggactttgaacttgcagcaact
caagatgttgagttcaatgagaacattatcaaagctgctagtgctattttagacccccag
aacaaggagcactgggaacagatccaacggacagaaggaggaactgcacatctgatgaaa
cactacgaggaatatgcacacaccatagcacgaaacctgaggaaaacctaccttcgaccc
ttcaccattgtcactccaaacatgatcattgcagtcgaactttttgagatgaccaaattt
cctggtgccagcatgccacaatttgagaaaattcgtgaaaaaattcccaaagaccttgaa
tccagcgtattttttccagatgcgctcctcaaaattgaaggtgacgaagggcagagtaac
catcctgaacacaatgtcaatgggaatttaggagatacattttctaaaaggaagaaaagg
aatgctggtggctcccacccatatgcagttgccgtggtgatcatttacagatcactaggc
ttgcttttgcccgaacgatacgatcctgatcgaagaagtatgagagtacctaatcgaccg
gttataaacacgcccattgtaagtgctacagtttatacgaacgaccagcctttgccacag
cagctggagagtccagtgactctaaagtatcgcttgtttgtaacggaggaaaggaccaag
cccgtctgtgtattttggaatcacactcttgcgattggaggcaccggagggtggtcttcc
aaagggtgtgaacttgttctacggaacgagtcgcatataaactgccagtgcaatcacatg
acgagttttgcagtgctcatggacatctccaagcgggagcatggtgaggtgctccctttg
aagatcgtcacatataccactgtttcagtttccttgtttgctttgtttgtgactttcctg
ttcctcatgctggtcagaacactacgctcaaacctccataacattcacaaaaatctggtg
gcagctctctttttctctgaactcgttttcctcattggaattaaccagacagacaatcca
tttgtctgcagtgtgatcgccctcttactgcattatttctacctctgtacctttgcctgg
acatttgtggaaggtctacatatttaccgcatgctgactgacctaaggaatgtgaatcat
ggacagatgagattctactacaccattggatgggggattcccgccattataacaggtttg
gctatggggttggatccacagggttatgggaacccggacttctgctggctgtctgtgcat
gacaccctgatctggagctttgctggcccaatctgtgtcgtagtcattataaatattgtc
atcttcgtactagctgccaaagcatcttgtggacctaggcacaggagttttgaaaagact
ggtatcatatctggcctgaggacagctttccttatgctgcttctcatcagcgcaacttgg
ttgctgggtttgatggcagtgaataatgatactatgaccttccattatctatttgccatt
ttcagttgcttccagggtctcttcattttcttctgccactgtattttcaacgaagaagtt
cggaaaggtctgaagaacatattcaccggaaagaagcaacatgcagatgacacagtactg
accagaaccacagttttatcacgatctctcaactgtaataatacatacgtggatgaaggg
cgaatgtatcgcactgctattggagaatccaccgcctccatggacagcactgtcaggtca
gccaagagccacaatagctgcattgcttctaaacgcagggaagaagctcagagagtgagt
ttactgtcaagtcaagctgaaggtggccaaacagaaccagattcttcaatattccacaaa
aaaataaagaaacctgatgagccagattctgactcagatagtgagctgtcgctggaagac
gatcacagtagctcctacgcttctagccattcatcggacagtgaagaagaggagtttcaa
agggaccccaaatggaaacaaggagcacctaaaaataatgaaaacaatcctatacacagc
acaccaaagggtgaggccatgcccaatcatgtgaagcgttactggcctgcagagtgtaca
acagccagtgacagtgaggaccatggaacattggagaaactgaaggtggaaacaaaagta
aacgttgagcttcatggagaaaataaatcaaatcactgcagtgacattcctagaggaggt
gaagatgaggagaaggaaagcatatctatacctcaccccagttccaatccacagccagag
caaagaaaaggtattcttaaaaataaagtcacatatccaccacctttaaaagaaaagaat
cggataaatcaaatacacaatgaactttctaactgtaaagcaacagctatatcttcacga
acttcctcagtagggtccagtgacgggacccgcaccggcgtgagcgtattgataaagcag
ccgagcaggcctcaatcacgagaccagttaaatgggatgacgcctatacccatgaatatt
agaacaggcacaagcacagtccatggagacacttctgattcagaaggaagtaatgaaacc
tcaatctga
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integrated database retrieval system
